RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 OR10J6PQ8NGY7 276 aa6.16□□□□□ -1.42
SSBP1-212ENST00000489378 NTN5Q8WTR8 489 aaPredicted RBP6.16□□□□□ -1.42
SSBP1-212ENST00000489378 BORCS5Q969J3 196 aa6.16□□□□□ -1.42
SSBP1-212ENST00000489378 VSIG2Q96IQ7 327 aa6.16□□□□□ -1.42
SSBP1-212ENST00000489378 LINC01587Q99440 93 aa6.16□□□□□ -1.42
SSBP1-212ENST00000489378 VCX2Q9H322 139 aa6.16□□□□□ -1.42
SSBP1-212ENST00000489378 GPN1Q9HCN4 374 aaPredicted RBP6.16□□□□□ -1.42
SSBP1-212ENST00000489378 MBD2Q9UBB5 411 aa6.16□□□□□ -1.42
SSBP1-212ENST00000489378 TRAV1-2A0A0B4J238 106 aa6.16□□□□□ -1.42
SSBP1-212ENST00000489378 LRCOL1A6NCL2 159 aa6.16□□□□□ -1.42
SSBP1-212ENST00000489378 ISLRO14498 428 aa6.16□□□□□ -1.42
SSBP1-212ENST00000489378 C1QBP02746 253 aa6.16□□□□□ -1.42
SSBP1-212ENST00000489378 ETV6P41212 452 aa6.16□□□□□ -1.42
SSBP1-212ENST00000489378 HSPA13P48723 471 aa6.16□□□□□ -1.42
SSBP1-212ENST00000489378 CNN1P51911 297 aaKnown RBP6.16□□□□□ -1.42
SSBP1-212ENST00000489378 SUB1P53999 127 aaKnown RBP eCLIP6.16□□□□□ -1.423e-6■□□□□ 11
SSBP1-212ENST00000489378 PHLDA2Q53GA4 152 aa6.16□□□□□ -1.42
SSBP1-212ENST00000489378 SMUG1Q53HV7 270 aa6.16□□□□□ -1.42
SSBP1-212ENST00000489378 Q6ZSA8 131 aa6.16□□□□□ -1.42
SSBP1-212ENST00000489378 TMED4Q7Z7H5 227 aa6.16□□□□□ -1.42
SSBP1-212ENST00000489378 C16orf74Q96GX8 76 aa6.16□□□□□ -1.42
SSBP1-212ENST00000489378 RPRMQ9NS64 109 aa6.16□□□□□ -1.42
SSBP1-212ENST00000489378 MSRB1Q9NZV6 116 aa6.16□□□□□ -1.42
SSBP1-212ENST00000489378 A0A0B4J293 547 aa6.15□□□□□ -1.43
SSBP1-212ENST00000489378 GAGE12BA1L429 117 aa6.15□□□□□ -1.43
SSBP1-212ENST00000489378 GPR31O00270 319 aa6.15□□□□□ -1.43
SSBP1-212ENST00000489378 GAGE7O76087 117 aa6.15□□□□□ -1.43
SSBP1-212ENST00000489378 NXPH3O95157 252 aa6.15□□□□□ -1.43
SSBP1-212ENST00000489378 TOMM40O96008 361 aa6.15□□□□□ -1.43
SSBP1-212ENST00000489378 GAGE12FP0CL80 117 aa6.15□□□□□ -1.43
SSBP1-212ENST00000489378 GAGE12GP0CL81 117 aa6.15□□□□□ -1.43
SSBP1-212ENST00000489378 GAGE12IP0CL82 117 aa6.15□□□□□ -1.43
SSBP1-212ENST00000489378 RD3LP0DJH9 198 aa6.15□□□□□ -1.43
SSBP1-212ENST00000489378 RAB3BP20337 219 aa6.15□□□□□ -1.43
SSBP1-212ENST00000489378 TAS2R60P59551 318 aa6.15□□□□□ -1.43
SSBP1-212ENST00000489378 SSTP61278 116 aa6.15□□□□□ -1.43
SSBP1-212ENST00000489378 BSXQ3C1V8 233 aa6.15□□□□□ -1.43
SSBP1-212ENST00000489378 DHRS11Q6UWP2 260 aa6.15□□□□□ -1.43
SSBP1-212ENST00000489378 TMEM144Q7Z5S9 345 aa6.15□□□□□ -1.43
SSBP1-212ENST00000489378 CMTM1Q8IZ96 169 aa6.15□□□□□ -1.43
SSBP1-212ENST00000489378 C8orf59Q8N0T1 100 aaPredicted RBP6.15□□□□□ -1.43
SSBP1-212ENST00000489378 DHRSXQ8N5I4 330 aa6.15□□□□□ -1.43
SSBP1-212ENST00000489378 OR5AP2Q8NGF4 316 aa6.15□□□□□ -1.43
SSBP1-212ENST00000489378 RNASE8Q8TDE3 154 aaKnown RBP6.15□□□□□ -1.43
SSBP1-212ENST00000489378 ZNF2Q9BSG1 426 aaPredicted RBP6.15□□□□□ -1.43
SSBP1-212ENST00000489378 FXYD6Q9H0Q3 95 aa6.15□□□□□ -1.43
SSBP1-212ENST00000489378 ACOT13Q9NPJ3 140 aa6.15□□□□□ -1.43
SSBP1-212ENST00000489378 EHFQ9NZC4 300 aa6.15□□□□□ -1.43
SSBP1-212ENST00000489378 TRAV18A0A075B6X5 111 aa6.14□□□□□ -1.43
SSBP1-212ENST00000489378 MEIS3P1A6NDR6 274 aa6.14□□□□□ -1.43
SSBP1-212ENST00000489378 MT1HL1P0DM35 61 aa6.14□□□□□ -1.43
SSBP1-212ENST00000489378 PSG1P11464 419 aa6.14□□□□□ -1.43
SSBP1-212ENST00000489378 UCP1P25874 307 aa6.14□□□□□ -1.43
SSBP1-212ENST00000489378 CDKN1BP46527 198 aa6.14□□□□□ -1.43
SSBP1-212ENST00000489378 RFX2P48378 723 aa6.14□□□□□ -1.43
SSBP1-212ENST00000489378 TIRAPP58753 221 aa6.14□□□□□ -1.43
SSBP1-212ENST00000489378 GPR141Q7Z602 305 aa6.14□□□□□ -1.43
SSBP1-212ENST00000489378 NPIPB3Q92617 1050 aa6.14□□□□□ -1.43
SSBP1-212ENST00000489378 PBDC1Q9BVG4 233 aa6.14□□□□□ -1.43
SSBP1-212ENST00000489378 SLC25A39Q9BZJ4 359 aaPredicted RBP6.14□□□□□ -1.43
SSBP1-212ENST00000489378 SLC25A32Q9H2D1 315 aa6.14□□□□□ -1.43
SSBP1-212ENST00000489378 C8orf4Q9NR00 106 aa6.14□□□□□ -1.43
SSBP1-212ENST00000489378 RAB26Q9ULW5 256 aa6.14□□□□□ -1.43
SSBP1-212ENST00000489378 SCGNO76038 276 aa6.13□□□□□ -1.43
SSBP1-212ENST00000489378 IGKV1-5P01602 117 aa6.13□□□□□ -1.43
SSBP1-212ENST00000489378 SMIM18P0DKX4 95 aa6.13□□□□□ -1.43
SSBP1-212ENST00000489378 MYL9P24844 172 aa6.13□□□□□ -1.43
SSBP1-212ENST00000489378 PSMB9P28065 219 aa6.13□□□□□ -1.43
SSBP1-212ENST00000489378 UCP3P55916 312 aa6.13□□□□□ -1.43
SSBP1-212ENST00000489378 MLLT11Q13015 90 aaPredicted RBP6.13□□□□□ -1.43
SSBP1-212ENST00000489378 TBC1D26Q86UD7 250 aa6.13□□□□□ -1.43
SSBP1-212ENST00000489378 Q8N814 137 aa6.13□□□□□ -1.43
SSBP1-212ENST00000489378 TMEM263Q8WUH6 116 aaKnown RBP6.13□□□□□ -1.43
SSBP1-212ENST00000489378 C8orf49Q96NF6 230 aa6.13□□□□□ -1.43
SSBP1-212ENST00000489378 TREM1Q9NP99 234 aa6.13□□□□□ -1.43
SSBP1-212ENST00000489378 TRAV9-2A0A087WT02 112 aa6.12□□□□□ -1.43
SSBP1-212ENST00000489378 PAGE4O60829 102 aa6.12□□□□□ -1.43
SSBP1-212ENST00000489378 ADAP1O75689 374 aa6.12□□□□□ -1.43
SSBP1-212ENST00000489378 PMP2P02689 132 aa6.12□□□□□ -1.43
SSBP1-212ENST00000489378 PRB4P10163 310 aaPredicted RBP6.12□□□□□ -1.43
SSBP1-212ENST00000489378 SLC25A4P12235 298 aa6.12□□□□□ -1.43
SSBP1-212ENST00000489378 PCP4P48539 62 aa6.12□□□□□ -1.43
SSBP1-212ENST00000489378 CAMPP49913 170 aa6.12□□□□□ -1.43
SSBP1-212ENST00000489378 SUPT4H1P63272 117 aaKnown RBP6.12□□□□□ -1.43
SSBP1-212ENST00000489378 IL18Q14116 193 aa6.12□□□□□ -1.43
SSBP1-212ENST00000489378 IGFL4Q6B9Z1 124 aa6.12□□□□□ -1.43
SSBP1-212ENST00000489378 ZNF493Q6ZR52 646 aa6.12□□□□□ -1.43
SSBP1-212ENST00000489378 SCXQ7RTU7 201 aa6.12□□□□□ -1.43
SSBP1-212ENST00000489378 TMEM256Q8N2U0 113 aa6.12□□□□□ -1.43
SSBP1-212ENST00000489378 ACY3Q96HD9 319 aa6.12□□□□□ -1.43
SSBP1-212ENST00000489378 CNBD2Q96M20 576 aa6.12□□□□□ -1.43
SSBP1-212ENST00000489378 LINC00467Q9BRT7 94 aa6.12□□□□□ -1.43
SSBP1-212ENST00000489378 ENY2Q9NPA8 101 aa6.12□□□□□ -1.43
SSBP1-212ENST00000489378 RHBDL2Q9NX52 303 aa6.12□□□□□ -1.43
SSBP1-212ENST00000489378 LY96Q9Y6Y9 160 aa6.12□□□□□ -1.43
SSBP1-212ENST00000489378 ZNF98A6NK75 572 aa6.11□□□□□ -1.43
SSBP1-212ENST00000489378 DUSP14O95147 198 aaKnown RBP6.11□□□□□ -1.43
SSBP1-212ENST00000489378 RLN2P04090 185 aa6.11□□□□□ -1.43
SSBP1-212ENST00000489378 HNRNPA3P51991 378 aaKnown RBP6.11□□□□□ -1.43
SSBP1-212ENST00000489378 TAS2R20P59543 309 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms