RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 SPARTQ8N0X7 666 aa7.52□□□□□ -1.21
HDAC6-233ENST00000489352 Q8N976 141 aa7.52□□□□□ -1.21
HDAC6-233ENST00000489352 RRNAD1Q96FB5 475 aaKnown RBP7.52□□□□□ -1.21
HDAC6-233ENST00000489352 TRAV8-6A0A0B4J262 113 aa7.51□□□□□ -1.21
HDAC6-233ENST00000489352 TRGV4A0A0C4DH28 118 aa7.51□□□□□ -1.21
HDAC6-233ENST00000489352 K7EQD1 137 aa7.51□□□□□ -1.21
HDAC6-233ENST00000489352 ATG12O94817 140 aa7.51□□□□□ -1.21
HDAC6-233ENST00000489352 SCAND1P57086 179 aa7.51□□□□□ -1.21
HDAC6-233ENST00000489352 KLF9Q13886 244 aaPredicted RBP7.51□□□□□ -1.21
HDAC6-233ENST00000489352 LINC01556Q5JQF7 62 aa7.51□□□□□ -1.21
HDAC6-233ENST00000489352 C9orf47Q6ZRZ4 202 aa7.51□□□□□ -1.21
HDAC6-233ENST00000489352 TBC1D26Q86UD7 250 aa7.51□□□□□ -1.21
HDAC6-233ENST00000489352 CCDC190Q86UF4 302 aa7.51□□□□□ -1.21
HDAC6-233ENST00000489352 ZBTB8BQ8NAP8 495 aaPredicted RBP7.51□□□□□ -1.21
HDAC6-233ENST00000489352 OR1B1Q8NGR6 318 aa7.51□□□□□ -1.21
HDAC6-233ENST00000489352 ST6GAL2Q96JF0 529 aa7.51□□□□□ -1.21
HDAC6-233ENST00000489352 LINC01600Q96MT4 127 aa7.51□□□□□ -1.21
HDAC6-233ENST00000489352 IGKV1-39P01597 117 aa7.5□□□□□ -1.21
HDAC6-233ENST00000489352 IGHV3-30P01768 117 aa7.5□□□□□ -1.21
HDAC6-233ENST00000489352 IGHV3-33P01772 117 aa7.5□□□□□ -1.21
HDAC6-233ENST00000489352 IGKV1D-39P04432 117 aa7.5□□□□□ -1.21
HDAC6-233ENST00000489352 IGHV3-30-3P0DP02 117 aa7.5□□□□□ -1.21
HDAC6-233ENST00000489352 IGHV3-30-5P0DP03 117 aa7.5□□□□□ -1.21
HDAC6-233ENST00000489352 BSXQ3C1V8 233 aa7.5□□□□□ -1.21
HDAC6-233ENST00000489352 LCE2AQ5TA79 106 aaPredicted RBP7.5□□□□□ -1.21
HDAC6-233ENST00000489352 STEAP1BQ6NZ63 245 aa7.5□□□□□ -1.21
HDAC6-233ENST00000489352 LPCAT3Q6P1A2 487 aa7.5□□□□□ -1.21
HDAC6-233ENST00000489352 DHRS11Q6UWP2 260 aa7.5□□□□□ -1.21
HDAC6-233ENST00000489352 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.5□□□□□ -1.21
HDAC6-233ENST00000489352 NOXA1Q86UR1 476 aa7.5□□□□□ -1.21
HDAC6-233ENST00000489352 ZNF680Q8NEM1 530 aa7.5□□□□□ -1.21
HDAC6-233ENST00000489352 LRRC20Q8TCA0 184 aa7.5□□□□□ -1.21
HDAC6-233ENST00000489352 BLNKQ8WV28 456 aa7.5□□□□□ -1.21
HDAC6-233ENST00000489352 CYGBQ8WWM9 190 aa7.5□□□□□ -1.21
HDAC6-233ENST00000489352 BAALCQ8WXS3 180 aa7.5□□□□□ -1.21
HDAC6-233ENST00000489352 MRPL32Q9BYC8 188 aaKnown RBP7.5□□□□□ -1.21
HDAC6-233ENST00000489352 SLC25A32Q9H2D1 315 aa7.5□□□□□ -1.21
HDAC6-233ENST00000489352 GSN-AS1Q9NRJ2 163 aa7.5□□□□□ -1.21
HDAC6-233ENST00000489352 PSORS1C1Q9UIG5 152 aa7.5□□□□□ -1.21
HDAC6-233ENST00000489352 RPH3ALQ9UNE2 315 aa7.5□□□□□ -1.21
HDAC6-233ENST00000489352 NXPH3O95157 252 aa7.49□□□□□ -1.21
HDAC6-233ENST00000489352 ORM1P02763 201 aa7.49□□□□□ -1.21
HDAC6-233ENST00000489352 RAB3BP20337 219 aa7.49□□□□□ -1.21
HDAC6-233ENST00000489352 MYL9P24844 172 aa7.49□□□□□ -1.21
HDAC6-233ENST00000489352 S100A7P31151 101 aa7.49□□□□□ -1.21
HDAC6-233ENST00000489352 PPT1P50897 306 aa7.49□□□□□ -1.21
HDAC6-233ENST00000489352 C2orf83Q53S99 150 aa7.49□□□□□ -1.21
HDAC6-233ENST00000489352 RNASE11Q8TAA1 199 aaKnown RBP7.49□□□□□ -1.21
HDAC6-233ENST00000489352 GPR82Q96P67 336 aa7.49□□□□□ -1.21
HDAC6-233ENST00000489352 PYGO2Q9BRQ0 406 aa7.49□□□□□ -1.21
HDAC6-233ENST00000489352 SLC25A31Q9H0C2 315 aa7.49□□□□□ -1.21
HDAC6-233ENST00000489352 IFT46Q9NQC8 304 aa7.49□□□□□ -1.21
HDAC6-233ENST00000489352 GABARAPH6UMI1 98 aa7.48□□□□□ -1.21
HDAC6-233ENST00000489352 J3KRW8 73 aa7.48□□□□□ -1.21
HDAC6-233ENST00000489352 GABARAPO95166 117 aa7.48□□□□□ -1.21
HDAC6-233ENST00000489352 RFX2P48378 723 aa7.48□□□□□ -1.21
HDAC6-233ENST00000489352 ZNF90Q03938 601 aa7.48□□□□□ -1.21
HDAC6-233ENST00000489352 LAGE3Q14657 143 aa7.48□□□□□ -1.21
HDAC6-233ENST00000489352 TRIM16LQ309B1 348 aa7.48□□□□□ -1.21
HDAC6-233ENST00000489352 OR10J3Q5JRS4 329 aa7.48□□□□□ -1.21
HDAC6-233ENST00000489352 GFI1BQ5VTD9 330 aa7.48□□□□□ -1.21
HDAC6-233ENST00000489352 C10orf67Q8IYJ2 551 aa7.48□□□□□ -1.21
HDAC6-233ENST00000489352 THAP8Q8NA92 274 aa7.48□□□□□ -1.21
HDAC6-233ENST00000489352 ACOT13Q9NPJ3 140 aa7.48□□□□□ -1.21
HDAC6-233ENST00000489352 TMEM56-RWDD3S4R434 201 aa7.48□□□□□ -1.21
HDAC6-233ENST00000489352 TRAV18A0A075B6X5 111 aa7.47□□□□□ -1.21
HDAC6-233ENST00000489352 TRAV8-3A0A0A6YYJ7 113 aa7.47□□□□□ -1.21
HDAC6-233ENST00000489352 TRAV8-2A0A0B4J237 113 aa7.47□□□□□ -1.21
HDAC6-233ENST00000489352 TRAV12-3A0A0B4J271 114 aa7.47□□□□□ -1.21
HDAC6-233ENST00000489352 SPCS3P61009 180 aa7.47□□□□□ -1.21
HDAC6-233ENST00000489352 FABP5Q01469 135 aa7.47□□□□□ -1.21
HDAC6-233ENST00000489352 FHL2Q14192 279 aa7.47□□□□□ -1.21
HDAC6-233ENST00000489352 SH2D6Q7Z4S9 175 aa7.47□□□□□ -1.21
HDAC6-233ENST00000489352 OR4D5Q8NGN0 318 aa7.47□□□□□ -1.21
HDAC6-233ENST00000489352 ATP6V0E2Q8NHE4 81 aa7.47□□□□□ -1.21
HDAC6-233ENST00000489352 COX11Q9Y6N1 276 aa7.47□□□□□ -1.21
HDAC6-233ENST00000489352 TRAV1-2A0A0B4J238 106 aa7.46□□□□□ -1.22
HDAC6-233ENST00000489352 CRYM-AS1A6NIL9 109 aa7.46□□□□□ -1.22
HDAC6-233ENST00000489352 PMP2P02689 132 aa7.46□□□□□ -1.22
HDAC6-233ENST00000489352 GATA2P23769 480 aaPredicted RBP7.46□□□□□ -1.22
HDAC6-233ENST00000489352 FAM219AQ8IW50 185 aa7.46□□□□□ -1.22
HDAC6-233ENST00000489352 NHLRC2Q8NBF2 726 aa7.46□□□□□ -1.22
HDAC6-233ENST00000489352 IL22RA2Q969J5 263 aa7.46□□□□□ -1.22
HDAC6-233ENST00000489352 A0A0J9YXV3 536 aa7.45□□□□□ -1.22
HDAC6-233ENST00000489352 MEIS3P1A6NDR6 274 aa7.45□□□□□ -1.22
HDAC6-233ENST00000489352 CEBPZOSA8MTT3 80 aa7.45□□□□□ -1.22
HDAC6-233ENST00000489352 SPINK4O60575 86 aa7.45□□□□□ -1.22
HDAC6-233ENST00000489352 IGKV1-5P01602 117 aa7.45□□□□□ -1.22
HDAC6-233ENST00000489352 ZFP1Q6P2D0 407 aa7.45□□□□□ -1.22
HDAC6-233ENST00000489352 ARRDC1Q8N5I2 433 aa7.45□□□□□ -1.22
HDAC6-233ENST00000489352 OR5H2Q8NGV7 314 aa7.45□□□□□ -1.22
HDAC6-233ENST00000489352 RPUSD4Q96CM3 377 aaKnown RBP7.45□□□□□ -1.22
HDAC6-233ENST00000489352 VGLL1Q99990 258 aa7.45□□□□□ -1.22
HDAC6-233ENST00000489352 PARD6GQ9BYG4 376 aaPredicted RBP7.45□□□□□ -1.22
HDAC6-233ENST00000489352 FXYD6Q9H0Q3 95 aa7.45□□□□□ -1.22
HDAC6-233ENST00000489352 PLCXD1Q9NUJ7 323 aa7.45□□□□□ -1.22
HDAC6-233ENST00000489352 PTGES3LE9PB15 166 aa7.44□□□□□ -1.22
HDAC6-233ENST00000489352 TSPAN5P62079 268 aa7.44□□□□□ -1.22
HDAC6-233ENST00000489352 ZNF846Q147U1 533 aa7.44□□□□□ -1.22
HDAC6-233ENST00000489352 SLC35E1Q96K37 410 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms