RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 MARCOQ9UEW3 520 aaPredicted RBP2.03□□□□□ -2.08
PRPF4-203ENST00000488937 KDM5CP41229 1560 aa2.02□□□□□ -2.09
PRPF4-203ENST00000488937 MBD5Q9P267 1494 aa2.02□□□□□ -2.09
PRPF4-203ENST00000488937 MYOM3Q5VTT5 1437 aa2.02□□□□□ -2.09
PRPF4-203ENST00000488937 ALPK3Q96L96 1907 aa2.02□□□□□ -2.09
PRPF4-203ENST00000488937 K7ERJ3 54 aa2.02□□□□□ -2.09
PRPF4-203ENST00000488937 CORTO00230 105 aa2.02□□□□□ -2.09
PRPF4-203ENST00000488937 NDUFB3O43676 98 aa2.02□□□□□ -2.09
PRPF4-203ENST00000488937 IGKV3-15P01624 115 aa2.02□□□□□ -2.09
PRPF4-203ENST00000488937 CLPSP04118 112 aa2.02□□□□□ -2.09
PRPF4-203ENST00000488937 COX6A1P12074 109 aa2.02□□□□□ -2.09
PRPF4-203ENST00000488937 ZNF14P17017 642 aaPredicted RBP2.02□□□□□ -2.09
PRPF4-203ENST00000488937 ZNF22P17026 224 aaPredicted RBP2.02□□□□□ -2.09
PRPF4-203ENST00000488937 NFYAP23511 347 aaPredicted RBP2.02□□□□□ -2.09
PRPF4-203ENST00000488937 RBP2P50120 134 aa2.02□□□□□ -2.09
PRPF4-203ENST00000488937 AKR1D1P51857 326 aa2.02□□□□□ -2.09
PRPF4-203ENST00000488937 EIF4EBP1Q13541 118 aaPredicted RBP2.02□□□□□ -2.09
PRPF4-203ENST00000488937 CCSMST1Q4G0I0 132 aa2.02□□□□□ -2.09
PRPF4-203ENST00000488937 TMEM155Q4W5P6 130 aa2.02□□□□□ -2.09
PRPF4-203ENST00000488937 LINC00483Q53H64 154 aa2.02□□□□□ -2.09
PRPF4-203ENST00000488937 IFT20Q8IY31 132 aa2.02□□□□□ -2.09
PRPF4-203ENST00000488937 MMGT1Q8N4V1 131 aa2.02□□□□□ -2.09
PRPF4-203ENST00000488937 TEX29Q8N6K0 151 aa2.02□□□□□ -2.09
PRPF4-203ENST00000488937 MORN4Q8NDC4 146 aa2.02□□□□□ -2.09
PRPF4-203ENST00000488937 DIRC1Q969H9 104 aa2.02□□□□□ -2.09
PRPF4-203ENST00000488937 AP1S3Q96PC3 154 aa2.02□□□□□ -2.09
PRPF4-203ENST00000488937 GNG8Q9UK08 70 aa2.02□□□□□ -2.09
PRPF4-203ENST00000488937 STRCQ7RTU9 1775 aa2.02□□□□□ -2.09
PRPF4-203ENST00000488937 PLA2R1Q13018 1463 aa2.01□□□□□ -2.09
PRPF4-203ENST00000488937 MYO16Q9Y6X6 1858 aa2.01□□□□□ -2.09
PRPF4-203ENST00000488937 KIDINS220Q9ULH0 1771 aa2.01□□□□□ -2.09
PRPF4-203ENST00000488937 IGLV3-12A0A075B6K2 115 aa2.01□□□□□ -2.09
PRPF4-203ENST00000488937 TRAV7A0A075B6U4 112 aa2.01□□□□□ -2.09
PRPF4-203ENST00000488937 TRGV5A0A0B4J1U4 118 aa2.01□□□□□ -2.09
PRPF4-203ENST00000488937 C7orf66A4D0T2 115 aa2.01□□□□□ -2.09
PRPF4-203ENST00000488937 C7orf71A4D174 169 aa2.01□□□□□ -2.09
PRPF4-203ENST00000488937 ZNF670-ZNF695F2Z2N8 137 aa2.01□□□□□ -2.09
PRPF4-203ENST00000488937 F6UZH7 168 aa2.01□□□□□ -2.09
PRPF4-203ENST00000488937 SLC22A1O15245 554 aa2.01□□□□□ -2.09
PRPF4-203ENST00000488937 RTL8CO15255 209 aa2.01□□□□□ -2.09
PRPF4-203ENST00000488937 TCRAP04437 139 aa2.01□□□□□ -2.09
PRPF4-203ENST00000488937 FXYD2P54710 66 aa2.01□□□□□ -2.09
PRPF4-203ENST00000488937 DYNLT1P63172 113 aa2.01□□□□□ -2.09
PRPF4-203ENST00000488937 KRTAP25-1Q3LHN0 102 aa2.01□□□□□ -2.09
PRPF4-203ENST00000488937 GLIPR1L1Q6UWM5 242 aa2.01□□□□□ -2.09
PRPF4-203ENST00000488937 SOSTDC1Q6X4U4 206 aa2.01□□□□□ -2.09
PRPF4-203ENST00000488937 C7orf65Q6ZTY9 151 aa2.01□□□□□ -2.09
PRPF4-203ENST00000488937 OR10AC1Q8NH08 325 aa2.01□□□□□ -2.09
PRPF4-203ENST00000488937 PRR34Q9NV39 138 aa2.01□□□□□ -2.09
PRPF4-203ENST00000488937 TXNL4BQ9NX01 149 aaKnown RBP2.01□□□□□ -2.09
PRPF4-203ENST00000488937 CITO14578 2027 aa2.01□□□□□ -2.09
PRPF4-203ENST00000488937 CACNA1DQ01668 2161 aa2□□□□□ -2.09
PRPF4-203ENST00000488937 A0A0D9SG52 128 aa2□□□□□ -2.09
PRPF4-203ENST00000488937 LOC100130705A0A1B0GUX0 176 aa2□□□□□ -2.09
PRPF4-203ENST00000488937 UQCRQO14949 82 aa2□□□□□ -2.09
PRPF4-203ENST00000488937 GNRH2O43555 120 aa2□□□□□ -2.09
PRPF4-203ENST00000488937 CREBL2O60519 120 aaPredicted RBP2□□□□□ -2.09
PRPF4-203ENST00000488937 APODP05090 189 aa2□□□□□ -2.09
PRPF4-203ENST00000488937 SLC25A5P05141 298 aaKnown RBP2□□□□□ -2.09
PRPF4-203ENST00000488937 KRTAP1-4P0C5Y4 121 aa2□□□□□ -2.09
PRPF4-203ENST00000488937 EBI3Q14213 229 aa2□□□□□ -2.09
PRPF4-203ENST00000488937 LGALSLQ3ZCW2 172 aaPredicted RBP2□□□□□ -2.09
PRPF4-203ENST00000488937 HSD17B12Q53GQ0 312 aa2□□□□□ -2.09
PRPF4-203ENST00000488937 EIF5AL1Q6IS14 154 aaKnown RBP2□□□□□ -2.09
PRPF4-203ENST00000488937 SPINT4Q6UDR6 99 aa2□□□□□ -2.09
PRPF4-203ENST00000488937 LYZL1Q6UWQ5 148 aa2□□□□□ -2.09
PRPF4-203ENST00000488937 TEN1Q86WV5 123 aa2□□□□□ -2.09
PRPF4-203ENST00000488937 RPS19BP1Q86WX3 136 aaKnown RBP2□□□□□ -2.09
PRPF4-203ENST00000488937 OR5D16Q8NGK9 328 aa2□□□□□ -2.09
PRPF4-203ENST00000488937 CCL4L1Q8NHW4 92 aa2□□□□□ -2.09
PRPF4-203ENST00000488937 MRPS24Q96EL2 167 aaKnown RBP2□□□□□ -2.09
PRPF4-203ENST00000488937 PPP3R2Q96LZ3 170 aa2□□□□□ -2.09
PRPF4-203ENST00000488937 MCEEQ96PE7 176 aa2□□□□□ -2.09
PRPF4-203ENST00000488937 NIT2Q9NQR4 276 aa2□□□□□ -2.09
PRPF4-203ENST00000488937 RIC1Q4ADV7 1423 aa2□□□□□ -2.09
PRPF4-203ENST00000488937 CUL7Q14999 1698 aa1.99□□□□□ -2.09
PRPF4-203ENST00000488937 MYLKQ15746 1914 aa1.99□□□□□ -2.09
PRPF4-203ENST00000488937 TRAV27A0A087WT01 109 aa1.99□□□□□ -2.09
PRPF4-203ENST00000488937 TRBV10-2A0A0K0K1G8 114 aa1.99□□□□□ -2.09
PRPF4-203ENST00000488937 FAM236AA0A1B0GUQ0 79 aa1.99□□□□□ -2.09
PRPF4-203ENST00000488937 FAM236BA0A1B0GV22 79 aa1.99□□□□□ -2.09
PRPF4-203ENST00000488937 OR2T8A6NH00 312 aa1.99□□□□□ -2.09
PRPF4-203ENST00000488937 C11orf86A6NJI1 115 aa1.99□□□□□ -2.09
PRPF4-203ENST00000488937 A8MWV9 139 aa1.99□□□□□ -2.09
PRPF4-203ENST00000488937 RER1O15258 196 aa1.99□□□□□ -2.09
PRPF4-203ENST00000488937 IFNA4P05014 189 aa1.99□□□□□ -2.09
PRPF4-203ENST00000488937 HLA-DRB4P13762 266 aa1.99□□□□□ -2.09
PRPF4-203ENST00000488937 MRPS10P82664 201 aaKnown RBP1.99□□□□□ -2.09
PRPF4-203ENST00000488937 MYL5Q02045 173 aa1.99□□□□□ -2.09
PRPF4-203ENST00000488937 PLGLB1Q02325 96 aa1.99□□□□□ -2.09
PRPF4-203ENST00000488937 PABPC1L2AQ5JQF8 200 aa1.99□□□□□ -2.09
PRPF4-203ENST00000488937 KRTAP5-7Q6L8G8 165 aa1.99□□□□□ -2.09
PRPF4-203ENST00000488937 TMEM91Q6ZNR0 172 aa1.99□□□□□ -2.09
PRPF4-203ENST00000488937 TMEM136Q6ZRR5 245 aa1.99□□□□□ -2.09
PRPF4-203ENST00000488937 LINC00311Q8N616 119 aa1.99□□□□□ -2.09
PRPF4-203ENST00000488937 TCTEX1D1Q8N7M0 179 aa1.99□□□□□ -2.09
PRPF4-203ENST00000488937 OR5H6Q8NGV6 325 aa1.99□□□□□ -2.09
PRPF4-203ENST00000488937 FGF13Q92913 245 aa1.99□□□□□ -2.09
PRPF4-203ENST00000488937 PRELID3AQ96N28 172 aa1.99□□□□□ -2.09
PRPF4-203ENST00000488937 OR8B2Q96RD0 313 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms