RNA–Protein interactions for RNA: ENST00000487996.5

HLA-DMB-261, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 1,746 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-261ENST00000487996 ZNF98A6NK75 572 aa8.08□□□□□ -1.12
HLA-DMB-261ENST00000487996 OR7C2O60412 319 aa8.08□□□□□ -1.12
HLA-DMB-261ENST00000487996 NMBP08949 121 aa8.08□□□□□ -1.12
HLA-DMB-261ENST00000487996 STAG3L2P0CL84 134 aa8.08□□□□□ -1.12
HLA-DMB-261ENST00000487996 STAG3L3P0CL85 134 aa8.08□□□□□ -1.12
HLA-DMB-261ENST00000487996 RPL7P18124 248 aaKnown RBP8.08□□□□□ -1.12
HLA-DMB-261ENST00000487996 PPT1P50897 306 aa8.08□□□□□ -1.12
HLA-DMB-261ENST00000487996 KRTAP10-3P60369 221 aa8.08□□□□□ -1.12
HLA-DMB-261ENST00000487996 LCN15Q6UWW0 184 aa8.08□□□□□ -1.12
HLA-DMB-261ENST00000487996 MIR17HGQ75NE6 70 aa8.08□□□□□ -1.12
HLA-DMB-261ENST00000487996 BPIFA4PQ86YQ2 179 aa8.08□□□□□ -1.12
HLA-DMB-261ENST00000487996 ZNF747Q9BV97 191 aa8.08□□□□□ -1.12
HLA-DMB-261ENST00000487996 IGHV3OR16-8A0A075B7F1 116 aa8.07□□□□□ -1.12
HLA-DMB-261ENST00000487996 IGHV7-4-1A0A0J9YVY3 117 aa8.07□□□□□ -1.12
HLA-DMB-261ENST00000487996 ADARB2-AS1A8MUL3 147 aa8.07□□□□□ -1.12
HLA-DMB-261ENST00000487996 BUB3O43684 328 aa8.07□□□□□ -1.12
HLA-DMB-261ENST00000487996 PF4P02776 101 aa8.07□□□□□ -1.12
HLA-DMB-261ENST00000487996 CD5P06127 495 aa8.07□□□□□ -1.12
HLA-DMB-261ENST00000487996 PSMB3P49720 205 aa8.07□□□□□ -1.12
HLA-DMB-261ENST00000487996 SLURP1P55000 103 aa8.07□□□□□ -1.12
HLA-DMB-261ENST00000487996 ZNF726P1Q15940 193 aa8.07□□□□□ -1.12
HLA-DMB-261ENST00000487996 SHISA2Q6UWI4 295 aa8.07□□□□□ -1.12
HLA-DMB-261ENST00000487996 OR8I2Q8N0Y5 310 aa8.07□□□□□ -1.12
HLA-DMB-261ENST00000487996 OR9G4Q8NGQ1 327 aa8.07□□□□□ -1.12
HLA-DMB-261ENST00000487996 SPATA3Q8NHX4 192 aa8.07□□□□□ -1.12
HLA-DMB-261ENST00000487996 ZNF414Q96IQ9 312 aa8.07□□□□□ -1.12
HLA-DMB-261ENST00000487996 SCRT1Q9BWW7 348 aa8.07□□□□□ -1.12
HLA-DMB-261ENST00000487996 TMEM167BQ9NRX6 74 aa8.07□□□□□ -1.12
HLA-DMB-261ENST00000487996 TMEM14CQ9P0S9 112 aa8.07□□□□□ -1.12
HLA-DMB-261ENST00000487996 STAB1Q9NY15 2570 aa8.07□□□□□ -1.12
HLA-DMB-261ENST00000487996 ARL14EPLP0DKL9 152 aa8.06□□□□□ -1.12
HLA-DMB-261ENST00000487996 GALR1P47211 349 aa8.06□□□□□ -1.12
HLA-DMB-261ENST00000487996 MEOX2P50222 304 aa8.06□□□□□ -1.12
HLA-DMB-261ENST00000487996 SPATA31B1PQ5VZV4 182 aa8.06□□□□□ -1.12
HLA-DMB-261ENST00000487996 IL34Q6ZMJ4 242 aa8.06□□□□□ -1.12
HLA-DMB-261ENST00000487996 LYPD6BQ8NI32 183 aa8.06□□□□□ -1.12
HLA-DMB-261ENST00000487996 SUN5Q8TC36 379 aa8.06□□□□□ -1.12
HLA-DMB-261ENST00000487996 DUX3Q96PT4 197 aa8.06□□□□□ -1.12
HLA-DMB-261ENST00000487996 PAXXQ9BUH6 204 aa8.06□□□□□ -1.12
HLA-DMB-261ENST00000487996 SLC25A2Q9BXI2 301 aa8.06□□□□□ -1.12
HLA-DMB-261ENST00000487996 HRH4Q9H3N8 390 aa8.06□□□□□ -1.12
HLA-DMB-261ENST00000487996 U3KQE9 123 aa8.06□□□□□ -1.12
HLA-DMB-261ENST00000487996 TMEM213A2RRL7 107 aa8.06□□□□□ -1.12
HLA-DMB-261ENST00000487996 HELTA6NFD8 242 aa8.06□□□□□ -1.12
HLA-DMB-261ENST00000487996 OVOL1O14753 267 aa8.06□□□□□ -1.12
HLA-DMB-261ENST00000487996 HMGB3O15347 200 aaKnown RBP8.06□□□□□ -1.12
HLA-DMB-261ENST00000487996 ZNF207O43670 478 aaKnown RBP8.06□□□□□ -1.12
HLA-DMB-261ENST00000487996 IFNA1P01562 189 aa8.06□□□□□ -1.12
HLA-DMB-261ENST00000487996 TAGLN2P37802 199 aaKnown RBP8.06□□□□□ -1.12
HLA-DMB-261ENST00000487996 UBE2L3P68036 154 aaKnown RBP8.06□□□□□ -1.12
HLA-DMB-261ENST00000487996 TM4SF20Q53R12 229 aa8.06□□□□□ -1.12
HLA-DMB-261ENST00000487996 DLX4Q92988 240 aaPredicted RBP8.06□□□□□ -1.12
HLA-DMB-261ENST00000487996 FAM167A-AS1Q96KT0 104 aa8.06□□□□□ -1.12
HLA-DMB-261ENST00000487996 OR51M1Q9H341 326 aa8.06□□□□□ -1.12
HLA-DMB-261ENST00000487996 SMPXQ9UHP9 88 aa8.06□□□□□ -1.12
HLA-DMB-261ENST00000487996 C2orf70A6NJV1 201 aa8.05□□□□□ -1.12
HLA-DMB-261ENST00000487996 GCHFRP30047 84 aa8.05□□□□□ -1.12
HLA-DMB-261ENST00000487996 GUK1Q16774 197 aa8.05□□□□□ -1.12
HLA-DMB-261ENST00000487996 MORN5Q5VZ52 161 aa8.05□□□□□ -1.12
HLA-DMB-261ENST00000487996 LEMD1Q68G75 181 aa8.05□□□□□ -1.12
HLA-DMB-261ENST00000487996 SSX7Q7RTT5 188 aa8.05□□□□□ -1.12
HLA-DMB-261ENST00000487996 RHPN1-AS1Q9BWJ2 59 aa8.05□□□□□ -1.12
HLA-DMB-261ENST00000487996 MANBALQ9NQG1 85 aa8.05□□□□□ -1.12
HLA-DMB-261ENST00000487996 ARL2-SNX15V9GYD0 113 aa8.05□□□□□ -1.12
HLA-DMB-261ENST00000487996 TRAV5A0A0B4J249 113 aa8.04□□□□□ -1.12
HLA-DMB-261ENST00000487996 CHEK1O14757 476 aa8.04□□□□□ -1.12
HLA-DMB-261ENST00000487996 HIST1H1EP10412 219 aaKnown RBP8.04□□□□□ -1.12
HLA-DMB-261ENST00000487996 GP9P14770 177 aa8.04□□□□□ -1.12
HLA-DMB-261ENST00000487996 ATF4P18848 351 aaPredicted RBP8.04□□□□□ -1.12
HLA-DMB-261ENST00000487996 CBLN1P23435 193 aa8.04□□□□□ -1.12
HLA-DMB-261ENST00000487996 FGF8P55075 233 aaPredicted RBP8.04□□□□□ -1.12
HLA-DMB-261ENST00000487996 PMS2P11Q13670 270 aa8.04□□□□□ -1.12
HLA-DMB-261ENST00000487996 SAMD13Q5VXD3 122 aa8.04□□□□□ -1.12
HLA-DMB-261ENST00000487996 HIST2H2BDQ6DRA6 164 aa8.04□□□□□ -1.12
HLA-DMB-261ENST00000487996 C16orf54Q6UWD8 224 aa8.04□□□□□ -1.12
HLA-DMB-261ENST00000487996 SIGLEC15Q6ZMC9 328 aa8.04□□□□□ -1.12
HLA-DMB-261ENST00000487996 SIGLEC8Q9NYZ4 499 aa8.04□□□□□ -1.12
HLA-DMB-261ENST00000487996 A0A1B0GV50 99 aa8.03□□□□□ -1.12
HLA-DMB-261ENST00000487996 FOLR2P14207 255 aa8.03□□□□□ -1.12
HLA-DMB-261ENST00000487996 PDE6HQ13956 83 aa8.03□□□□□ -1.12
HLA-DMB-261ENST00000487996 PCNPQ8WW12 178 aaKnown RBP8.03□□□□□ -1.12
HLA-DMB-261ENST00000487996 GLMPQ8WWB7 406 aa8.03□□□□□ -1.12
HLA-DMB-261ENST00000487996 NKX6-2Q9C056 277 aaPredicted RBP8.03□□□□□ -1.12
HLA-DMB-261ENST00000487996 MED9Q9NWA0 146 aa8.03□□□□□ -1.12
HLA-DMB-261ENST00000487996 TENM1Q9UKZ4 2725 aa8.03□□□□□ -1.12
HLA-DMB-261ENST00000487996 IGHV3OR16-13A0A075B7E8 117 aa8.03□□□□□ -1.12
HLA-DMB-261ENST00000487996 IGHV3-49A0A0A0MS15 119 aa8.03□□□□□ -1.12
HLA-DMB-261ENST00000487996 IGHV3-74A0A0B4J1X5 117 aa8.03□□□□□ -1.12
HLA-DMB-261ENST00000487996 WIPF1O43516 503 aa8.03□□□□□ -1.12
HLA-DMB-261ENST00000487996 APOHP02749 345 aaPredicted RBP8.03□□□□□ -1.12
HLA-DMB-261ENST00000487996 OR10J4P0C629 311 aa8.03□□□□□ -1.12
HLA-DMB-261ENST00000487996 NBEAP1P0C6P0 100 aa8.03□□□□□ -1.12
HLA-DMB-261ENST00000487996 NDUFA5Q16718 116 aa8.03□□□□□ -1.12
HLA-DMB-261ENST00000487996 DYNLRB2Q8TF09 96 aa8.03□□□□□ -1.12
HLA-DMB-261ENST00000487996 TXNDC17Q9BRA2 123 aa8.03□□□□□ -1.12
HLA-DMB-261ENST00000487996 GNG13Q9P2W3 67 aa8.03□□□□□ -1.12
HLA-DMB-261ENST00000487996 A0A087X0K7 114 aa8.02□□□□□ -1.13
HLA-DMB-261ENST00000487996 IGHV3-66A0A0C4DH42 116 aa8.02□□□□□ -1.13
HLA-DMB-261ENST00000487996 ZNF785A8K8V0 405 aa8.02□□□□□ -1.13
HLA-DMB-261ENST00000487996 ZNF253O75346 499 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms