RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 SCO2A0A1W2PP80 73 aa11.32□□□□□ -0.6
POLR2J3-204ENST00000486319 H3BRN7 92 aa11.32□□□□□ -0.6
POLR2J3-204ENST00000486319 TRGV3P03979 118 aa11.32□□□□□ -0.6
POLR2J3-204ENST00000486319 CLEC3BP05452 202 aa11.32□□□□□ -0.6
POLR2J3-204ENST00000486319 GP9P14770 177 aa11.32□□□□□ -0.6
POLR2J3-204ENST00000486319 GPR183P32249 361 aa11.32□□□□□ -0.6
POLR2J3-204ENST00000486319 AKR1C3P42330 323 aa11.32□□□□□ -0.6
POLR2J3-204ENST00000486319 TCEAL7Q9BRU2 100 aa11.32□□□□□ -0.6
POLR2J3-204ENST00000486319 NBEAP1P0C6P0 100 aa11.31□□□□□ -0.6
POLR2J3-204ENST00000486319 SUMO1P63165 101 aaKnown RBP11.31□□□□□ -0.6
POLR2J3-204ENST00000486319 USMG5Q96IX5 58 aa11.31□□□□□ -0.6
POLR2J3-204ENST00000486319 ANK2Q01484 3957 aa11.31□□□□□ -0.6
POLR2J3-204ENST00000486319 A0A1B0GUS0 222 aa11.3□□□□□ -0.6
POLR2J3-204ENST00000486319 GGTLC3B5MD39 225 aa11.3□□□□□ -0.6
POLR2J3-204ENST00000486319 TSPAN4O14817 238 aa11.3□□□□□ -0.6
POLR2J3-204ENST00000486319 NDUFA7O95182 113 aa11.3□□□□□ -0.6
POLR2J3-204ENST00000486319 ADMP35318 185 aa11.3□□□□□ -0.6
POLR2J3-204ENST00000486319 RPL23P62829 140 aaKnown RBP11.3□□□□□ -0.6
POLR2J3-204ENST00000486319 ADIRFQ15847 76 aa11.3□□□□□ -0.6
POLR2J3-204ENST00000486319 USF2Q15853 346 aaPredicted RBP11.3□□□□□ -0.6
POLR2J3-204ENST00000486319 LEMD1Q68G75 181 aa11.3□□□□□ -0.6
POLR2J3-204ENST00000486319 ZNF343Q6P1L6 599 aa11.3□□□□□ -0.6
POLR2J3-204ENST00000486319 BPIFA4PQ86YQ2 179 aa11.3□□□□□ -0.6
POLR2J3-204ENST00000486319 C15orf54Q8N8G6 183 aa11.3□□□□□ -0.6
POLR2J3-204ENST00000486319 CCDC140Q96MF4 163 aa11.3□□□□□ -0.6
POLR2J3-204ENST00000486319 NOL4LQ96MY1 436 aaPredicted RBP11.3□□□□□ -0.6
POLR2J3-204ENST00000486319 CHRDL1Q9BU40 450 aa11.3□□□□□ -0.6
POLR2J3-204ENST00000486319 TENM1Q9UKZ4 2725 aa11.3□□□□□ -0.6
POLR2J3-204ENST00000486319 CXorf65A6NEN9 183 aa11.3□□□□□ -0.6
POLR2J3-204ENST00000486319 BMPR1BO00238 502 aa11.3□□□□□ -0.6
POLR2J3-204ENST00000486319 TGOLN2O43493 480 aa11.3□□□□□ -0.6
POLR2J3-204ENST00000486319 HIST1H1EP10412 219 aaKnown RBP11.3□□□□□ -0.6
POLR2J3-204ENST00000486319 TPPP2P59282 170 aa11.3□□□□□ -0.6
POLR2J3-204ENST00000486319 CLEC19AQ6UXS0 136 aa11.3□□□□□ -0.6
POLR2J3-204ENST00000486319 Q6ZS46 218 aa11.3□□□□□ -0.6
POLR2J3-204ENST00000486319 TMEM190Q8WZ59 177 aa11.3□□□□□ -0.6
POLR2J3-204ENST00000486319 DERL1Q9BUN8 251 aa11.3□□□□□ -0.6
POLR2J3-204ENST00000486319 ZNF747Q9BV97 191 aa11.3□□□□□ -0.6
POLR2J3-204ENST00000486319 CTDSP1Q9GZU7 261 aa11.3□□□□□ -0.6
POLR2J3-204ENST00000486319 TMEM242Q9NWH2 141 aa11.3□□□□□ -0.6
POLR2J3-204ENST00000486319 RABAC1Q9UI14 185 aa11.3□□□□□ -0.6
POLR2J3-204ENST00000486319 TMA7Q9Y2S6 64 aaKnown RBP11.3□□□□□ -0.6
POLR2J3-204ENST00000486319 ZNF98A6NK75 572 aa11.29□□□□□ -0.6
POLR2J3-204ENST00000486319 C9JCJ5 164 aa11.29□□□□□ -0.6
POLR2J3-204ENST00000486319 IGLV1-40P01703 118 aa11.29□□□□□ -0.6
POLR2J3-204ENST00000486319 MT-ND4LP03901 98 aa11.29□□□□□ -0.6
POLR2J3-204ENST00000486319 CRYBB3P26998 211 aa11.29□□□□□ -0.6
POLR2J3-204ENST00000486319 RELQ04864 619 aaPredicted RBP11.29□□□□□ -0.6
POLR2J3-204ENST00000486319 OR4F17Q8NGA8 305 aa11.29□□□□□ -0.6
POLR2J3-204ENST00000486319 BLNKQ8WV28 456 aa11.29□□□□□ -0.6
POLR2J3-204ENST00000486319 PRSS22Q9GZN4 317 aa11.29□□□□□ -0.6
POLR2J3-204ENST00000486319 A0A0G2JLM5 398 aa11.28□□□□□ -0.6
POLR2J3-204ENST00000486319 HELTA6NFD8 242 aa11.28□□□□□ -0.6
POLR2J3-204ENST00000486319 MYCNOSP40205 109 aa11.28□□□□□ -0.6
POLR2J3-204ENST00000486319 CFHR3Q02985 330 aa11.28□□□□□ -0.6
POLR2J3-204ENST00000486319 SHISA2Q6UWI4 295 aa11.28□□□□□ -0.6
POLR2J3-204ENST00000486319 ZNF329Q86UD4 541 aa11.28□□□□□ -0.6
POLR2J3-204ENST00000486319 ELOVL1Q9BW60 279 aa11.28□□□□□ -0.6
POLR2J3-204ENST00000486319 NPFFR1Q9GZQ6 430 aa11.28□□□□□ -0.6
POLR2J3-204ENST00000486319 GNB4Q9HAV0 340 aa11.28□□□□□ -0.6
POLR2J3-204ENST00000486319 LY96Q9Y6Y9 160 aa11.28□□□□□ -0.6
POLR2J3-204ENST00000486319 CLPSL1A2RUU4 121 aa11.27□□□□□ -0.61
POLR2J3-204ENST00000486319 PF4V1P10720 104 aa11.27□□□□□ -0.61
POLR2J3-204ENST00000486319 RPL35P42766 123 aaKnown RBP11.27□□□□□ -0.61
POLR2J3-204ENST00000486319 RAB9AP51151 201 aa11.27□□□□□ -0.61
POLR2J3-204ENST00000486319 RANP62826 216 aaKnown RBP11.27□□□□□ -0.61
POLR2J3-204ENST00000486319 TOMM20LQ6UXN7 152 aa11.27□□□□□ -0.61
POLR2J3-204ENST00000486319 Q6ZSV7 163 aa11.27□□□□□ -0.61
POLR2J3-204ENST00000486319 LINC01551Q86U37 167 aa11.27□□□□□ -0.61
POLR2J3-204ENST00000486319 LINC01006Q8NI28 216 aa11.27□□□□□ -0.61
POLR2J3-204ENST00000486319 C2CD4CQ8TF44 421 aa11.27□□□□□ -0.61
POLR2J3-204ENST00000486319 HIST1H2BAQ96A08 127 aa11.27□□□□□ -0.61
POLR2J3-204ENST00000486319 ANAPC16Q96DE5 110 aa11.27□□□□□ -0.61
POLR2J3-204ENST00000486319 ZFAND3Q9H8U3 227 aa11.27□□□□□ -0.61
POLR2J3-204ENST00000486319 PGPA6NDG6 321 aa11.26□□□□□ -0.61
POLR2J3-204ENST00000486319 COLCA2A8K830 154 aa11.26□□□□□ -0.61
POLR2J3-204ENST00000486319 RNF212Q495C1 297 aa11.26□□□□□ -0.61
POLR2J3-204ENST00000486319 ISOC2Q96AB3 205 aa11.26□□□□□ -0.61
POLR2J3-204ENST00000486319 ZNF586Q9NXT0 402 aa11.26□□□□□ -0.61
POLR2J3-204ENST00000486319 RNF114Q9Y508 228 aa11.26□□□□□ -0.61
POLR2J3-204ENST00000486319 TRBV20OR9-2A0A075B6H5 130 aa11.25□□□□□ -0.61
POLR2J3-204ENST00000486319 PEX7O00628 323 aa11.25□□□□□ -0.61
POLR2J3-204ENST00000486319 MRPS12O15235 138 aaKnown RBP11.25□□□□□ -0.61
POLR2J3-204ENST00000486319 IGHG4P01861 327 aa11.25□□□□□ -0.61
POLR2J3-204ENST00000486319 IGLC2P0DOY2 106 aa11.25□□□□□ -0.61
POLR2J3-204ENST00000486319 RPL7P18124 248 aaKnown RBP11.25□□□□□ -0.61
POLR2J3-204ENST00000486319 ARL3P36405 182 aa11.25□□□□□ -0.61
POLR2J3-204ENST00000486319 TAS2R60P59551 318 aa11.25□□□□□ -0.61
POLR2J3-204ENST00000486319 FAM209BQ5JX69 171 aa11.25□□□□□ -0.61
POLR2J3-204ENST00000486319 LYPD1Q8N2G4 141 aa11.25□□□□□ -0.61
POLR2J3-204ENST00000486319 C5orf17Q8NAS9 161 aa11.25□□□□□ -0.61
POLR2J3-204ENST00000486319 Q9H3A6 140 aa11.25□□□□□ -0.61
POLR2J3-204ENST00000486319 C16orf95Q9H693 158 aa11.25□□□□□ -0.61
POLR2J3-204ENST00000486319 OTORQ9NRC9 128 aa11.25□□□□□ -0.61
POLR2J3-204ENST00000486319 TRBV19A0A075B6N1 114 aa11.25□□□□□ -0.61
POLR2J3-204ENST00000486319 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.25□□□□□ -0.61
POLR2J3-204ENST00000486319 SLC25A5P05141 298 aaKnown RBP11.25□□□□□ -0.61
POLR2J3-204ENST00000486319 SNRPCP09234 159 aaKnown RBP11.25□□□□□ -0.61
POLR2J3-204ENST00000486319 GNG4P50150 75 aa11.25□□□□□ -0.61
POLR2J3-204ENST00000486319 CNN1P51911 297 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms