RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 HNRNPA3P51991 378 aaKnown RBP4.36□□□□□ -1.71
SMC4-217ENST00000485867 SUB1P53999 127 aaKnown RBP eCLIP4.36□□□□□ -1.71
SMC4-217ENST00000485867 FABP5Q01469 135 aa4.36□□□□□ -1.71
SMC4-217ENST00000485867 TRAM1Q15629 374 aa4.36□□□□□ -1.71
SMC4-217ENST00000485867 TBCEQ15813 527 aaPredicted RBP4.36□□□□□ -1.71
SMC4-217ENST00000485867 IZUMO4Q1ZYL8 232 aa4.36□□□□□ -1.71
SMC4-217ENST00000485867 ZFP1Q6P2D0 407 aa4.36□□□□□ -1.71
SMC4-217ENST00000485867 SFXN4Q6P4A7 337 aa4.36□□□□□ -1.71
SMC4-217ENST00000485867 PRSS54Q6PEW0 395 aa4.36□□□□□ -1.71
SMC4-217ENST00000485867 ZNF493Q6ZR52 646 aa4.36□□□□□ -1.71
SMC4-217ENST00000485867 TMEM144Q7Z5S9 345 aa4.36□□□□□ -1.71
SMC4-217ENST00000485867 GPR141Q7Z602 305 aa4.36□□□□□ -1.71
SMC4-217ENST00000485867 HOGA1Q86XE5 327 aa4.36□□□□□ -1.71
SMC4-217ENST00000485867 TMEM256Q8N2U0 113 aa4.36□□□□□ -1.71
SMC4-217ENST00000485867 TMEM263Q8WUH6 116 aaKnown RBP4.36□□□□□ -1.71
SMC4-217ENST00000485867 MRGPRFQ96AM1 343 aa4.36□□□□□ -1.71
SMC4-217ENST00000485867 LINC01587Q99440 93 aa4.36□□□□□ -1.71
SMC4-217ENST00000485867 CCDC90BQ9GZT6 254 aa4.36□□□□□ -1.71
SMC4-217ENST00000485867 PLCXD1Q9NUJ7 323 aa4.36□□□□□ -1.71
SMC4-217ENST00000485867 LY96Q9Y6Y9 160 aa4.36□□□□□ -1.71
SMC4-217ENST00000485867 BOLA2-SMG1P6H3BVE0 249 aa4.35□□□□□ -1.71
SMC4-217ENST00000485867 PDCD5O14737 125 aa4.35□□□□□ -1.71
SMC4-217ENST00000485867 CIB2O75838 187 aa4.35□□□□□ -1.71
SMC4-217ENST00000485867 DUSP14O95147 198 aaKnown RBP4.35□□□□□ -1.71
SMC4-217ENST00000485867 FCER2P06734 321 aa4.35□□□□□ -1.71
SMC4-217ENST00000485867 HSMCR30P0CW71 290 aa4.35□□□□□ -1.71
SMC4-217ENST00000485867 HTN1P15515 57 aa4.35□□□□□ -1.71
SMC4-217ENST00000485867 PSMA1P25786 263 aaKnown RBP4.35□□□□□ -1.71
SMC4-217ENST00000485867 UCP1P25874 307 aa4.35□□□□□ -1.71
SMC4-217ENST00000485867 PSMB9P28065 219 aa4.35□□□□□ -1.71
SMC4-217ENST00000485867 ETV6P41212 452 aa4.35□□□□□ -1.71
SMC4-217ENST00000485867 BSXQ3C1V8 233 aa4.35□□□□□ -1.71
SMC4-217ENST00000485867 PRR26Q8N8Z3 221 aa4.35□□□□□ -1.71
SMC4-217ENST00000485867 OR51G1Q8NGK1 321 aa4.35□□□□□ -1.71
SMC4-217ENST00000485867 CYGBQ8WWM9 190 aa4.35□□□□□ -1.71
SMC4-217ENST00000485867 URB1-AS1Q96HZ7 61 aa4.35□□□□□ -1.71
SMC4-217ENST00000485867 FXYD6Q9H0Q3 95 aa4.35□□□□□ -1.71
SMC4-217ENST00000485867 FAM212BQ9NTI7 297 aaPredicted RBP4.35□□□□□ -1.71
SMC4-217ENST00000485867 FAT4Q6V0I7 4981 aa4.34□□□□□ -1.71
SMC4-217ENST00000485867 TRAV1-2A0A0B4J238 106 aa4.34□□□□□ -1.71
SMC4-217ENST00000485867 ZNF98A6NK75 572 aa4.34□□□□□ -1.71
SMC4-217ENST00000485867 K7EP13 123 aa4.34□□□□□ -1.71
SMC4-217ENST00000485867 GPR31O00270 319 aa4.34□□□□□ -1.71
SMC4-217ENST00000485867 PSCAO43653 123 aa4.34□□□□□ -1.71
SMC4-217ENST00000485867 SCGNO76038 276 aa4.34□□□□□ -1.71
SMC4-217ENST00000485867 RLN2P04090 185 aa4.34□□□□□ -1.71
SMC4-217ENST00000485867 RD3LP0DJH9 198 aa4.34□□□□□ -1.71
SMC4-217ENST00000485867 SLC25A4P12235 298 aa4.34□□□□□ -1.71
SMC4-217ENST00000485867 SUPT4H1P63272 117 aaKnown RBP4.34□□□□□ -1.71
SMC4-217ENST00000485867 C1orf194Q5T5A4 169 aa4.34□□□□□ -1.71
SMC4-217ENST00000485867 SAMD13Q5VXD3 122 aa4.34□□□□□ -1.71
SMC4-217ENST00000485867 OR8G2PQ6IF36 304 aa4.34□□□□□ -1.71
SMC4-217ENST00000485867 CMTM1Q8IZ96 169 aa4.34□□□□□ -1.71
SMC4-217ENST00000485867 SLC24A4Q8NFF2 622 aa4.34□□□□□ -1.71
SMC4-217ENST00000485867 OR5AP2Q8NGF4 316 aa4.34□□□□□ -1.71
SMC4-217ENST00000485867 PBDC1Q9BVG4 233 aa4.34□□□□□ -1.71
SMC4-217ENST00000485867 SLC25A39Q9BZJ4 359 aaPredicted RBP4.34□□□□□ -1.71
SMC4-217ENST00000485867 EHFQ9NZC4 300 aa4.34□□□□□ -1.71
SMC4-217ENST00000485867 ICOSQ9Y6W8 199 aa4.34□□□□□ -1.71
SMC4-217ENST00000485867 A0A087WYN8 130 aa4.33□□□□□ -1.72
SMC4-217ENST00000485867 A0A0B4J293 547 aa4.33□□□□□ -1.72
SMC4-217ENST00000485867 SMIM30A4D0T7 59 aa4.33□□□□□ -1.72
SMC4-217ENST00000485867 GAGE12JA6NER3 117 aa4.33□□□□□ -1.72
SMC4-217ENST00000485867 IGKV1-5P01602 117 aa4.33□□□□□ -1.72
SMC4-217ENST00000485867 RAB3BP20337 219 aa4.33□□□□□ -1.72
SMC4-217ENST00000485867 EVI2AP22794 236 aa4.33□□□□□ -1.72
SMC4-217ENST00000485867 MEOX2P50222 304 aa4.33□□□□□ -1.72
SMC4-217ENST00000485867 RPL36AP83881 106 aaKnown RBP4.33□□□□□ -1.72
SMC4-217ENST00000485867 PHLDA2Q53GA4 152 aa4.33□□□□□ -1.72
SMC4-217ENST00000485867 LYPD5Q6UWN5 251 aa4.33□□□□□ -1.72
SMC4-217ENST00000485867 DHRS11Q6UWP2 260 aa4.33□□□□□ -1.72
SMC4-217ENST00000485867 WFDC10BQ8IUB3 73 aa4.33□□□□□ -1.72
SMC4-217ENST00000485867 NPIPB3Q92617 1050 aa4.33□□□□□ -1.72
SMC4-217ENST00000485867 ZNF2Q9BSG1 426 aaPredicted RBP4.33□□□□□ -1.72
SMC4-217ENST00000485867 ENY2Q9NPA8 101 aa4.33□□□□□ -1.72
SMC4-217ENST00000485867 ACOT13Q9NPJ3 140 aa4.33□□□□□ -1.72
SMC4-217ENST00000485867 IGLV2-8P01709 118 aa4.32□□□□□ -1.72
SMC4-217ENST00000485867 CRYGDP07320 174 aa4.32□□□□□ -1.72
SMC4-217ENST00000485867 GNAO1P09471 354 aa4.32□□□□□ -1.72
SMC4-217ENST00000485867 ZNF182P17025 639 aaPredicted RBP4.32□□□□□ -1.72
SMC4-217ENST00000485867 MYL9P24844 172 aa4.32□□□□□ -1.72
SMC4-217ENST00000485867 HTR2BP41595 481 aa4.32□□□□□ -1.72
SMC4-217ENST00000485867 RPL37AP61513 92 aaKnown RBP4.32□□□□□ -1.72
SMC4-217ENST00000485867 MLLT11Q13015 90 aaPredicted RBP4.32□□□□□ -1.72
SMC4-217ENST00000485867 GAMTQ14353 236 aa4.32□□□□□ -1.72
SMC4-217ENST00000485867 WFDC2Q14508 124 aa4.32□□□□□ -1.72
SMC4-217ENST00000485867 GFI1BQ5VTD9 330 aa4.32□□□□□ -1.72
SMC4-217ENST00000485867 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.32□□□□□ -1.72
SMC4-217ENST00000485867 Q6ZTI0 123 aa4.32□□□□□ -1.72
SMC4-217ENST00000485867 TBC1D26Q86UD7 250 aa4.32□□□□□ -1.72
SMC4-217ENST00000485867 C8orf59Q8N0T1 100 aaPredicted RBP4.32□□□□□ -1.72
SMC4-217ENST00000485867 OR8I2Q8N0Y5 310 aa4.32□□□□□ -1.72
SMC4-217ENST00000485867 C10orf126Q8N4M7 172 aa4.32□□□□□ -1.72
SMC4-217ENST00000485867 DHRSXQ8N5I4 330 aa4.32□□□□□ -1.72
SMC4-217ENST00000485867 LRTM2Q8N967 370 aa4.32□□□□□ -1.72
SMC4-217ENST00000485867 CIRBP-AS1Q8TBR5 109 aa4.32□□□□□ -1.72
SMC4-217ENST00000485867 ACY3Q96HD9 319 aa4.32□□□□□ -1.72
SMC4-217ENST00000485867 PDCD10Q9BUL8 212 aa4.32□□□□□ -1.72
SMC4-217ENST00000485867 CHAC1Q9BUX1 264 aa4.32□□□□□ -1.72
SMC4-217ENST00000485867 RHBDL2Q9NX52 303 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 175 ms