RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 AMBPP02760 352 aa4.03□□□□□ -1.76
CCDC39-205ENST00000485055 LGALS1P09382 135 aaKnown RBP4.03□□□□□ -1.76
CCDC39-205ENST00000485055 RCC1P18754 421 aaPredicted RBP4.03□□□□□ -1.76
CCDC39-205ENST00000485055 MDKP21741 143 aaPredicted RBP4.03□□□□□ -1.76
CCDC39-205ENST00000485055 RPS28P62857 69 aaKnown RBP4.03□□□□□ -1.76
CCDC39-205ENST00000485055 MPV17LQ2QL34 196 aa4.03□□□□□ -1.76
CCDC39-205ENST00000485055 Q8N6K4 173 aa4.03□□□□□ -1.76
CCDC39-205ENST00000485055 GDPD1Q8N9F7 314 aa4.03□□□□□ -1.76
CCDC39-205ENST00000485055 RXFP4Q8TDU9 374 aa4.03□□□□□ -1.76
CCDC39-205ENST00000485055 PGLYRP4Q96LB8 373 aa4.03□□□□□ -1.76
CCDC39-205ENST00000485055 EDA2RQ9HAV5 297 aa4.03□□□□□ -1.76
CCDC39-205ENST00000485055 CYSLTR1Q9Y271 337 aa4.03□□□□□ -1.76
CCDC39-205ENST00000485055 RNF114Q9Y508 228 aa4.03□□□□□ -1.76
CCDC39-205ENST00000485055 LOC107986453A0A1B0GWG9 222 aa4.03□□□□□ -1.76
CCDC39-205ENST00000485055 FAM181BA6NEQ2 426 aa4.03□□□□□ -1.76
CCDC39-205ENST00000485055 GAGE12JA6NER3 117 aa4.03□□□□□ -1.76
CCDC39-205ENST00000485055 GAGE7O76087 117 aa4.03□□□□□ -1.76
CCDC39-205ENST00000485055 GAGE12FP0CL80 117 aa4.03□□□□□ -1.76
CCDC39-205ENST00000485055 GAGE12GP0CL81 117 aa4.03□□□□□ -1.76
CCDC39-205ENST00000485055 GAGE12IP0CL82 117 aa4.03□□□□□ -1.76
CCDC39-205ENST00000485055 G6PCP35575 357 aa4.03□□□□□ -1.76
CCDC39-205ENST00000485055 NCS1P62166 190 aa4.03□□□□□ -1.76
CCDC39-205ENST00000485055 IFITM3Q01628 133 aa4.03□□□□□ -1.76
CCDC39-205ENST00000485055 GAGE4Q13068 117 aa4.03□□□□□ -1.76
CCDC39-205ENST00000485055 SSX1Q16384 188 aa4.03□□□□□ -1.76
CCDC39-205ENST00000485055 IAH1Q2TAA2 248 aaPredicted RBP4.03□□□□□ -1.76
CCDC39-205ENST00000485055 SGPP2Q8IWX5 399 aa4.03□□□□□ -1.76
CCDC39-205ENST00000485055 C6orf223Q8N319 242 aa4.03□□□□□ -1.76
CCDC39-205ENST00000485055 C11orf72Q8NBR9 251 aa4.03□□□□□ -1.76
CCDC39-205ENST00000485055 OR1L1Q8NH94 360 aa4.03□□□□□ -1.76
CCDC39-205ENST00000485055 WDR13Q9H1Z4 485 aa4.03□□□□□ -1.76
CCDC39-205ENST00000485055 TMEM133Q9H2Q1 129 aa4.03□□□□□ -1.76
CCDC39-205ENST00000485055 PRO1933Q9H354 126 aa4.03□□□□□ -1.76
CCDC39-205ENST00000485055 V9GY05 133 aa4.03□□□□□ -1.76
CCDC39-205ENST00000485055 IGHV3OR15-7A0A075B7D8 119 aa4.02□□□□□ -1.77
CCDC39-205ENST00000485055 BORCS7-ASMTA0A0B4J1R7 106 aa4.02□□□□□ -1.77
CCDC39-205ENST00000485055 TRAV8-6A0A0B4J262 113 aa4.02□□□□□ -1.77
CCDC39-205ENST00000485055 PAX4O43316 350 aa4.02□□□□□ -1.77
CCDC39-205ENST00000485055 ZNF780AO75290 641 aaPredicted RBP4.02□□□□□ -1.77
CCDC39-205ENST00000485055 PDCD6O75340 191 aa4.02□□□□□ -1.77
CCDC39-205ENST00000485055 PGLYRP1O75594 196 aaPredicted RBP4.02□□□□□ -1.77
CCDC39-205ENST00000485055 IGHV4-59P01825 116 aa4.02□□□□□ -1.77
CCDC39-205ENST00000485055 CRYBA1P05813 215 aa4.02□□□□□ -1.77
CCDC39-205ENST00000485055 MFAP2P55001 183 aa4.02□□□□□ -1.77
CCDC39-205ENST00000485055 NANOS3P60323 173 aaKnown RBP4.02□□□□□ -1.77
CCDC39-205ENST00000485055 COL10A1Q03692 680 aa4.02□□□□□ -1.77
CCDC39-205ENST00000485055 IL15RAQ13261 267 aa4.02□□□□□ -1.77
CCDC39-205ENST00000485055 GLIPR1L1Q6UWM5 242 aa4.02□□□□□ -1.77
CCDC39-205ENST00000485055 HSD17B13Q7Z5P4 300 aaPredicted RBP4.02□□□□□ -1.77
CCDC39-205ENST00000485055 YIPF7Q8N8F6 280 aa4.02□□□□□ -1.77
CCDC39-205ENST00000485055 TMEM229BQ8NBD8 167 aa4.02□□□□□ -1.77
CCDC39-205ENST00000485055 OR5D14Q8NGL3 314 aa4.02□□□□□ -1.77
CCDC39-205ENST00000485055 ADAT3Q96EY9 351 aaPredicted RBP4.02□□□□□ -1.77
CCDC39-205ENST00000485055 ZNF714Q96N38 554 aa4.02□□□□□ -1.77
CCDC39-205ENST00000485055 ANAPC13Q9BS18 74 aa4.02□□□□□ -1.77
CCDC39-205ENST00000485055 NAT8BQ9UHF3 227 aa4.02□□□□□ -1.77
CCDC39-205ENST00000485055 ARHGAP32A7KAX9 2087 aa4.02□□□□□ -1.77
CCDC39-205ENST00000485055 TMEM272A0A1B0GTI8 110 aa4.02□□□□□ -1.77
CCDC39-205ENST00000485055 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.02□□□□□ -1.77
CCDC39-205ENST00000485055 TOMM40O96008 361 aa4.02□□□□□ -1.77
CCDC39-205ENST00000485055 FCGR3AP08637 254 aa4.02□□□□□ -1.77
CCDC39-205ENST00000485055 LINC00694P0DN24 101 aa4.02□□□□□ -1.77
CCDC39-205ENST00000485055 CNTFRP26992 372 aa4.02□□□□□ -1.77
CCDC39-205ENST00000485055 EGFEM1PQ0D2K5 195 aa4.02□□□□□ -1.77
CCDC39-205ENST00000485055 CDK5R1Q15078 307 aa4.02□□□□□ -1.77
CCDC39-205ENST00000485055 C17orf58Q2M2W7 97 aa4.02□□□□□ -1.77
CCDC39-205ENST00000485055 KLK9Q2XQG4 91 aa4.02□□□□□ -1.77
CCDC39-205ENST00000485055 ZNF880Q6PDB4 577 aa4.02□□□□□ -1.77
CCDC39-205ENST00000485055 FAM71E2Q8N5Q1 922 aa4.02□□□□□ -1.77
CCDC39-205ENST00000485055 MYOZ3Q8TDC0 251 aa4.02□□□□□ -1.77
CCDC39-205ENST00000485055 CLEC7AQ9BXN2 247 aa4.02□□□□□ -1.77
CCDC39-205ENST00000485055 JPT2Q9H910 190 aa4.02□□□□□ -1.77
CCDC39-205ENST00000485055 KLK9Q9UKQ9 250 aa4.02□□□□□ -1.77
CCDC39-205ENST00000485055 AMMECR1Q9Y4X0 333 aaPredicted RBP4.02□□□□□ -1.77
CCDC39-205ENST00000485055 SELENOKQ9Y6D0 94 aa4.02□□□□□ -1.77
CCDC39-205ENST00000485055 RTTNQ86VV8 2226 aa4.02□□□□□ -1.77
CCDC39-205ENST00000485055 IGKV1-12A0A0C4DH73 117 aa4.01□□□□□ -1.77
CCDC39-205ENST00000485055 IGKV1D-12P01611 117 aa4.01□□□□□ -1.77
CCDC39-205ENST00000485055 MT-ND4LP03901 98 aa4.01□□□□□ -1.77
CCDC39-205ENST00000485055 RAB3BP20337 219 aa4.01□□□□□ -1.77
CCDC39-205ENST00000485055 PSMB9P28065 219 aa4.01□□□□□ -1.77
CCDC39-205ENST00000485055 HNRNPA3P51991 378 aaKnown RBP4.01□□□□□ -1.77
CCDC39-205ENST00000485055 GP2P55259 537 aaKnown RBP4.01□□□□□ -1.77
CCDC39-205ENST00000485055 S100A10P60903 97 aa4.01□□□□□ -1.77
CCDC39-205ENST00000485055 HLA-DRB3P79483 266 aa4.01□□□□□ -1.77
CCDC39-205ENST00000485055 ZFP69Q49AA0 526 aa4.01□□□□□ -1.77
CCDC39-205ENST00000485055 RUSC1-AS1Q66K80 236 aa4.01□□□□□ -1.77
CCDC39-205ENST00000485055 ANKRD29Q8N6D5 301 aa4.01□□□□□ -1.77
CCDC39-205ENST00000485055 CHCHD10Q8WYQ3 142 aaPredicted RBP4.01□□□□□ -1.77
CCDC39-205ENST00000485055 BORCS8Q96FH0 119 aa4.01□□□□□ -1.77
CCDC39-205ENST00000485055 URB1-AS1Q96HZ7 61 aa4.01□□□□□ -1.77
CCDC39-205ENST00000485055 C20orf85Q9H1P6 137 aa4.01□□□□□ -1.77
CCDC39-205ENST00000485055 KCNIP2Q9NS61 270 aa4.01□□□□□ -1.77
CCDC39-205ENST00000485055 VSIG4Q9Y279 399 aa4.01□□□□□ -1.77
CCDC39-205ENST00000485055 IGHV2-26A0A0B4J1V2 119 aa4.01□□□□□ -1.77
CCDC39-205ENST00000485055 LINC00862A6NCI5 91 aa4.01□□□□□ -1.77
CCDC39-205ENST00000485055 E9PLD3 99 aa4.01□□□□□ -1.77
CCDC39-205ENST00000485055 NDUFS5O43920 106 aa4.01□□□□□ -1.77
CCDC39-205ENST00000485055 IGHV4-30-4P0DP06 118 aa4.01□□□□□ -1.77
CCDC39-205ENST00000485055 RBM11P57052 281 aaKnown RBP4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms