RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 C16orf97H3BN30 126 aa9.29□□□□□ -0.92
SEC61A1-205ENST00000483956 PRCDQ00LT1 54 aa9.29□□□□□ -0.92
SEC61A1-205ENST00000483956 ODF1Q14990 250 aa9.29□□□□□ -0.92
SEC61A1-205ENST00000483956 LINC00322Q6ZN03 302 aaPredicted RBP9.29□□□□□ -0.92
SEC61A1-205ENST00000483956 CACNA1GO43497 2377 aa9.29□□□□□ -0.92
SEC61A1-205ENST00000483956 IGLL5B9A064 214 aa9.29□□□□□ -0.92
SEC61A1-205ENST00000483956 LTAP01374 205 aa9.29□□□□□ -0.92
SEC61A1-205ENST00000483956 CSN1S1P47710 185 aa9.29□□□□□ -0.92
SEC61A1-205ENST00000483956 SSBP2P81877 361 aaPredicted RBP9.29□□□□□ -0.92
SEC61A1-205ENST00000483956 MORN5Q5VZ52 161 aa9.29□□□□□ -0.92
SEC61A1-205ENST00000483956 MOB3BQ86TA1 216 aa9.29□□□□□ -0.92
SEC61A1-205ENST00000483956 C1QTNF4Q9BXJ3 329 aa9.29□□□□□ -0.92
SEC61A1-205ENST00000483956 IGKV1OR2-108A0A075B7D4 117 aa9.28□□□□□ -0.92
SEC61A1-205ENST00000483956 TCRBV4S1A1TA0A5B7 111 aa9.28□□□□□ -0.92
SEC61A1-205ENST00000483956 PEX7O00628 323 aa9.28□□□□□ -0.92
SEC61A1-205ENST00000483956 GNG5P63218 68 aa9.28□□□□□ -0.92
SEC61A1-205ENST00000483956 UBE2L3P68036 154 aaKnown RBP9.28□□□□□ -0.92
SEC61A1-205ENST00000483956 LOXL1Q08397 574 aaPredicted RBP9.28□□□□□ -0.92
SEC61A1-205ENST00000483956 KLRD1Q13241 179 aa9.28□□□□□ -0.92
SEC61A1-205ENST00000483956 SRSF6Q13247 344 aaKnown RBP9.28□□□□□ -0.92
SEC61A1-205ENST00000483956 C17orf58Q2M2W7 97 aa9.28□□□□□ -0.92
SEC61A1-205ENST00000483956 ZNF502Q8TBZ5 544 aa9.28□□□□□ -0.92
SEC61A1-205ENST00000483956 GLMPQ8WWB7 406 aa9.28□□□□□ -0.92
SEC61A1-205ENST00000483956 IGHV3-13P01766 116 aa9.28□□□□□ -0.92
SEC61A1-205ENST00000483956 IGHG3P01860 377 aa9.28□□□□□ -0.92
SEC61A1-205ENST00000483956 FOXI1Q12951 378 aa9.28□□□□□ -0.92
SEC61A1-205ENST00000483956 C2orf83Q53S99 150 aa9.28□□□□□ -0.92
SEC61A1-205ENST00000483956 MRPL32Q9BYC8 188 aaKnown RBP9.28□□□□□ -0.92
SEC61A1-205ENST00000483956 RPP21Q9H633 154 aaKnown RBP9.28□□□□□ -0.92
SEC61A1-205ENST00000483956 DSCAML1Q8TD84 2053 aa9.27□□□□□ -0.92
SEC61A1-205ENST00000483956 A0A096LNJ9 63 aa9.27□□□□□ -0.93
SEC61A1-205ENST00000483956 ANXA2RQ3ZCQ2 193 aa9.27□□□□□ -0.93
SEC61A1-205ENST00000483956 HES3Q5TGS1 186 aa9.27□□□□□ -0.93
SEC61A1-205ENST00000483956 DMXL1Q9Y485 3027 aa9.27□□□□□ -0.93
SEC61A1-205ENST00000483956 FAM90A27PA6NNH2 459 aa9.27□□□□□ -0.93
SEC61A1-205ENST00000483956 NPIPB6E9PJ23 425 aa9.27□□□□□ -0.93
SEC61A1-205ENST00000483956 C8orf88P0DMB2 117 aa9.27□□□□□ -0.93
SEC61A1-205ENST00000483956 FXYD7P58549 80 aa9.27□□□□□ -0.93
SEC61A1-205ENST00000483956 LGALS9BQ3B8N2 356 aa9.27□□□□□ -0.93
SEC61A1-205ENST00000483956 UTF1Q5T230 341 aa9.27□□□□□ -0.93
SEC61A1-205ENST00000483956 LGALS9CQ6DKI2 356 aa9.27□□□□□ -0.93
SEC61A1-205ENST00000483956 CNEP1R1Q8N9A8 125 aa9.27□□□□□ -0.93
SEC61A1-205ENST00000483956 ZNRF1Q8ND25 227 aa9.27□□□□□ -0.93
SEC61A1-205ENST00000483956 SLC25A33Q9BSK2 321 aa9.27□□□□□ -0.93
SEC61A1-205ENST00000483956 TNFRSF18Q9Y5U5 241 aa9.27□□□□□ -0.93
SEC61A1-205ENST00000483956 TANC2Q9HCD6 1990 aa9.27□□□□□ -0.93
SEC61A1-205ENST00000483956 HEATR1Q9H583 2144 aaKnown RBP9.27□□□□□ -0.93
SEC61A1-205ENST00000483956 IGHV1-18A0A0C4DH31 117 aa9.26□□□□□ -0.93
SEC61A1-205ENST00000483956 UPK2O00526 184 aa9.26□□□□□ -0.93
SEC61A1-205ENST00000483956 PYYP10082 97 aa9.26□□□□□ -0.93
SEC61A1-205ENST00000483956 FAM169BQ8N8A8 192 aa9.26□□□□□ -0.93
SEC61A1-205ENST00000483956 OR1L8Q8NGR8 309 aa9.26□□□□□ -0.93
SEC61A1-205ENST00000483956 PRSS3P2Q8NHM4 247 aa9.26□□□□□ -0.93
SEC61A1-205ENST00000483956 CHAC1Q9BUX1 264 aa9.26□□□□□ -0.93
SEC61A1-205ENST00000483956 IGHV3OR15-7A0A075B7D8 119 aa9.26□□□□□ -0.93
SEC61A1-205ENST00000483956 LHBP01229 141 aa9.26□□□□□ -0.93
SEC61A1-205ENST00000483956 MYOD1P15172 320 aa9.26□□□□□ -0.93
SEC61A1-205ENST00000483956 LPAL2Q16609 132 aa9.26□□□□□ -0.93
SEC61A1-205ENST00000483956 ZNF329Q86UD4 541 aa9.26□□□□□ -0.93
SEC61A1-205ENST00000483956 LEAP2Q969E1 77 aa9.26□□□□□ -0.93
SEC61A1-205ENST00000483956 hADV38S2A0JD32 116 aa9.26□□□□□ -0.93
SEC61A1-205ENST00000483956 PRSS29PA6NIE9 313 aa9.26□□□□□ -0.93
SEC61A1-205ENST00000483956 FAM167A-AS1Q96KT0 104 aa9.26□□□□□ -0.93
SEC61A1-205ENST00000483956 ZFHX2Q9C0A1 2572 aaPredicted RBP9.26□□□□□ -0.93
SEC61A1-205ENST00000483956 KNTC1P50748 2209 aa9.25□□□□□ -0.93
SEC61A1-205ENST00000483956 IGKV2D-26A0A0A0MRZ7 120 aa9.25□□□□□ -0.93
SEC61A1-205ENST00000483956 PRRG2O14669 202 aa9.25□□□□□ -0.93
SEC61A1-205ENST00000483956 RBPMS2Q6ZRY4 209 aaKnown RBP9.25□□□□□ -0.93
SEC61A1-205ENST00000483956 PRELID3AQ96N28 172 aa9.25□□□□□ -0.93
SEC61A1-205ENST00000483956 ZNF714Q96N38 554 aa9.25□□□□□ -0.93
SEC61A1-205ENST00000483956 SLC25A2Q9BXI2 301 aa9.25□□□□□ -0.93
SEC61A1-205ENST00000483956 LINC00574Q9H8X3 128 aa9.25□□□□□ -0.93
SEC61A1-205ENST00000483956 SOX21Q9Y651 276 aaPredicted RBP9.25□□□□□ -0.93
SEC61A1-205ENST00000483956 TMEM30BQ3MIR4 351 aa9.25□□□□□ -0.93
SEC61A1-205ENST00000483956 NFE4Q86UQ8 179 aa9.25□□□□□ -0.93
SEC61A1-205ENST00000483956 C1orf210Q8IVY1 113 aa9.25□□□□□ -0.93
SEC61A1-205ENST00000483956 LAMA5O15230 3695 aa9.25□□□□□ -0.93
SEC61A1-205ENST00000483956 NHLRC4P0CG21 123 aaPredicted RBP9.24□□□□□ -0.93
SEC61A1-205ENST00000483956 RNASE2P10153 161 aaKnown RBP9.24□□□□□ -0.93
SEC61A1-205ENST00000483956 IFI27P40305 119 aaPredicted RBP9.24□□□□□ -0.93
SEC61A1-205ENST00000483956 ID1P41134 155 aa9.24□□□□□ -0.93
SEC61A1-205ENST00000483956 CD69Q07108 199 aa9.24□□□□□ -0.93
SEC61A1-205ENST00000483956 C9orf106Q8NAJ2 232 aa9.24□□□□□ -0.93
SEC61A1-205ENST00000483956 PRRC2CQ9Y520 2896 aaKnown RBP9.24□□□□□ -0.93
SEC61A1-205ENST00000483956 PRR14LQ5THK1 2151 aa9.24□□□□□ -0.93
SEC61A1-205ENST00000483956 P01737 135 aa9.24□□□□□ -0.93
SEC61A1-205ENST00000483956 Q6AWC8 147 aa9.24□□□□□ -0.93
SEC61A1-205ENST00000483956 OR10X1Q8NGY0 326 aa9.24□□□□□ -0.93
SEC61A1-205ENST00000483956 OR9G1Q8NH87 305 aa9.24□□□□□ -0.93
SEC61A1-205ENST00000483956 ZNF414Q96IQ9 312 aa9.24□□□□□ -0.93
SEC61A1-205ENST00000483956 DKK2Q9UBU2 259 aa9.24□□□□□ -0.93
SEC61A1-205ENST00000483956 MAP1BP46821 2468 aaKnown RBP9.24□□□□□ -0.93
SEC61A1-205ENST00000483956 LOC389332A0A1B0GUA5 103 aa9.23□□□□□ -0.93
SEC61A1-205ENST00000483956 MSMPQ1L6U9 139 aa9.23□□□□□ -0.93
SEC61A1-205ENST00000483956 MOGAT3Q86VF5 341 aa9.23□□□□□ -0.93
SEC61A1-205ENST00000483956 RPRMLQ8N4K4 120 aa9.23□□□□□ -0.93
SEC61A1-205ENST00000483956 PRSS22Q9GZN4 317 aa9.23□□□□□ -0.93
SEC61A1-205ENST00000483956 GVINP1Q7Z2Y8 2422 aa9.23□□□□□ -0.93
SEC61A1-205ENST00000483956 INS-IGF2F8WCM5 200 aa9.23□□□□□ -0.93
SEC61A1-205ENST00000483956 CEND1Q8N111 149 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms