RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 PZPP20742 1482 aa2.02□□□□□ -2.09
SF3B1-210ENST00000482158 ARHGAP35Q9NRY4 1499 aa2.02□□□□□ -2.09
SF3B1-210ENST00000482158 TRAV9-1A0A075B6T8 112 aa2.02□□□□□ -2.09
SF3B1-210ENST00000482158 IGKV1D-43A0A0B4J1Z2 117 aa2.02□□□□□ -2.09
SF3B1-210ENST00000482158 ARRDC5A6NEK1 342 aa2.02□□□□□ -2.09
SF3B1-210ENST00000482158 C11orf86A6NJI1 115 aa2.02□□□□□ -2.09
SF3B1-210ENST00000482158 TMEM212A6NML5 194 aa2.02□□□□□ -2.09
SF3B1-210ENST00000482158 UBFD1O14562 309 aaKnown RBP2.02□□□□□ -2.09
SF3B1-210ENST00000482158 APODP05090 189 aa2.02□□□□□ -2.09
SF3B1-210ENST00000482158 GPX1P07203 203 aa2.02□□□□□ -2.09
SF3B1-210ENST00000482158 IGLC6P0CF74 106 aa2.02□□□□□ -2.09
SF3B1-210ENST00000482158 ZNF728P0DKX0 622 aa2.02□□□□□ -2.09
SF3B1-210ENST00000482158 HIST1H1BP16401 226 aaKnown RBP2.02□□□□□ -2.09
SF3B1-210ENST00000482158 CA7P43166 264 aa2.02□□□□□ -2.09
SF3B1-210ENST00000482158 GNG4P50150 75 aa2.02□□□□□ -2.09
SF3B1-210ENST00000482158 RAB5CP51148 216 aa2.02□□□□□ -2.09
SF3B1-210ENST00000482158 TAS2R45P59539 299 aa2.02□□□□□ -2.09
SF3B1-210ENST00000482158 CDK6Q00534 326 aa2.02□□□□□ -2.09
SF3B1-210ENST00000482158 GLT8D1Q68CQ7 371 aa2.02□□□□□ -2.09
SF3B1-210ENST00000482158 TMEM14EPQ6UXP3 125 aa2.02□□□□□ -2.09
SF3B1-210ENST00000482158 CTAGE3PQ8IX95 158 aa2.02□□□□□ -2.09
SF3B1-210ENST00000482158 TOMM6Q96B49 74 aa2.02□□□□□ -2.09
SF3B1-210ENST00000482158 TEX37Q96LM6 180 aa2.02□□□□□ -2.09
SF3B1-210ENST00000482158 SNHG12Q9BXW3 62 aa2.02□□□□□ -2.09
SF3B1-210ENST00000482158 OTORQ9NRC9 128 aa2.02□□□□□ -2.09
SF3B1-210ENST00000482158 TP73-AS1Q9UF72 201 aa2.02□□□□□ -2.09
SF3B1-210ENST00000482158 AK3Q9UIJ7 227 aa2.02□□□□□ -2.09
SF3B1-210ENST00000482158 BOKQ9UMX3 212 aaPredicted RBP2.02□□□□□ -2.09
SF3B1-210ENST00000482158 SIPA1L1O43166 1804 aa2.02□□□□□ -2.09
SF3B1-210ENST00000482158 MDC1Q14676 2089 aaKnown RBP2.02□□□□□ -2.09
SF3B1-210ENST00000482158 MYOM2P54296 1465 aa2.01□□□□□ -2.09
SF3B1-210ENST00000482158 CCDC18Q5T9S5 1454 aa2.01□□□□□ -2.09
SF3B1-210ENST00000482158 TROQ12816 1431 aaPredicted RBP2.01□□□□□ -2.09
SF3B1-210ENST00000482158 CEP162Q5TB80 1403 aa2.01□□□□□ -2.09
SF3B1-210ENST00000482158 TRBV20OR9-2A0A075B6H5 130 aa2.01□□□□□ -2.09
SF3B1-210ENST00000482158 TMEM218A2RU14 115 aa2.01□□□□□ -2.09
SF3B1-210ENST00000482158 GRIFINA4D1Z8 144 aa2.01□□□□□ -2.09
SF3B1-210ENST00000482158 IFITM5A6NNB3 132 aa2.01□□□□□ -2.09
SF3B1-210ENST00000482158 J3QR89 54 aa2.01□□□□□ -2.09
SF3B1-210ENST00000482158 NPFFO15130 113 aa2.01□□□□□ -2.09
SF3B1-210ENST00000482158 GNRH2O43555 120 aa2.01□□□□□ -2.09
SF3B1-210ENST00000482158 LYZL6O75951 148 aa2.01□□□□□ -2.09
SF3B1-210ENST00000482158 MT-ND4LP03901 98 aa2.01□□□□□ -2.09
SF3B1-210ENST00000482158 TRGC2P03986 189 aa2.01□□□□□ -2.09
SF3B1-210ENST00000482158 PAEPP09466 180 aa2.01□□□□□ -2.09
SF3B1-210ENST00000482158 HLA-EP13747 358 aa2.01□□□□□ -2.09
SF3B1-210ENST00000482158 INSL3P51460 131 aa2.01□□□□□ -2.09
SF3B1-210ENST00000482158 RBM11P57052 281 aaKnown RBP2.01□□□□□ -2.09
SF3B1-210ENST00000482158 RTL8BQ17RB0 113 aa2.01□□□□□ -2.09
SF3B1-210ENST00000482158 CNEP1R1Q8N9A8 125 aa2.01□□□□□ -2.09
SF3B1-210ENST00000482158 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.01□□□□□ -2.09
SF3B1-210ENST00000482158 OR5A2Q8NGI9 324 aa2.01□□□□□ -2.09
SF3B1-210ENST00000482158 DCANP1Q8TF63 244 aa2.01□□□□□ -2.09
SF3B1-210ENST00000482158 RAB2BQ8WUD1 216 aa2.01□□□□□ -2.09
SF3B1-210ENST00000482158 PP6455Q8WZ26 134 aa2.01□□□□□ -2.09
SF3B1-210ENST00000482158 C2orf50Q96LR7 162 aa2.01□□□□□ -2.09
SF3B1-210ENST00000482158 NAA38Q9BRA0 125 aaKnown RBP2.01□□□□□ -2.09
SF3B1-210ENST00000482158 TMEM133Q9H2Q1 129 aa2.01□□□□□ -2.09
SF3B1-210ENST00000482158 RNF122Q9H9V4 155 aa2.01□□□□□ -2.09
SF3B1-210ENST00000482158 NAT8Q9UHE5 227 aa2.01□□□□□ -2.09
SF3B1-210ENST00000482158 ZFC3H1O60293 1989 aaKnown RBP2.01□□□□□ -2.09
SF3B1-210ENST00000482158 PTPRBP23467 1997 aa2.01□□□□□ -2.09
SF3B1-210ENST00000482158 KDM5CP41229 1560 aa2.01□□□□□ -2.09
SF3B1-210ENST00000482158 MAP3K1Q13233 1512 aa2.01□□□□□ -2.09
SF3B1-210ENST00000482158 ADGRL2O95490 1459 aa2.01□□□□□ -2.09
SF3B1-210ENST00000482158 NUP98P52948 1817 aa2.01□□□□□ -2.09
SF3B1-210ENST00000482158 PARP14Q460N5 1801 aa2.01□□□□□ -2.09
SF3B1-210ENST00000482158 ABCA3Q99758 1704 aa2□□□□□ -2.09
SF3B1-210ENST00000482158 TRBV7-6A0A0J9YX20 115 aa2□□□□□ -2.09
SF3B1-210ENST00000482158 TLCD2A6NGC4 264 aa2□□□□□ -2.09
SF3B1-210ENST00000482158 GGT3PA6NGU5 568 aa2□□□□□ -2.09
SF3B1-210ENST00000482158 ZNF670-ZNF695F2Z2N8 137 aa2□□□□□ -2.09
SF3B1-210ENST00000482158 PLA2G10O15496 165 aa2□□□□□ -2.09
SF3B1-210ENST00000482158 NCR2O95944 276 aa2□□□□□ -2.09
SF3B1-210ENST00000482158 IGKV1-5P01602 117 aa2□□□□□ -2.09
SF3B1-210ENST00000482158 NFYBP25208 207 aa2□□□□□ -2.09
SF3B1-210ENST00000482158 ZNF80P51504 273 aaPredicted RBP2□□□□□ -2.09
SF3B1-210ENST00000482158 NDUFA6P56556 154 aa2□□□□□ -2.09
SF3B1-210ENST00000482158 RHOGP84095 191 aa2□□□□□ -2.09
SF3B1-210ENST00000482158 BCL2L15Q5TBC7 163 aa2□□□□□ -2.09
SF3B1-210ENST00000482158 TMEM244Q5VVB8 128 aa2□□□□□ -2.09
SF3B1-210ENST00000482158 C1orf140Q5VVS0 124 aa2□□□□□ -2.09
SF3B1-210ENST00000482158 LCA10Q71F78 164 aa2□□□□□ -2.09
SF3B1-210ENST00000482158 GPHB5Q86YW7 130 aa2□□□□□ -2.09
SF3B1-210ENST00000482158 RPP25LQ8N5L8 163 aaKnown RBP2□□□□□ -2.09
SF3B1-210ENST00000482158 OR2T10Q8NGZ9 312 aa2□□□□□ -2.09
SF3B1-210ENST00000482158 RPS4Y2Q8TD47 263 aa2□□□□□ -2.09
SF3B1-210ENST00000482158 H1FXQ92522 213 aaKnown RBP2□□□□□ -2.09
SF3B1-210ENST00000482158 FGF13Q92913 245 aa2□□□□□ -2.09
SF3B1-210ENST00000482158 RNASE6Q93091 150 aaKnown RBP2□□□□□ -2.09
SF3B1-210ENST00000482158 AP1S3Q96PC3 154 aa2□□□□□ -2.09
SF3B1-210ENST00000482158 MRPL57Q9BQC6 102 aaKnown RBP2□□□□□ -2.09
SF3B1-210ENST00000482158 EFCAB1Q9HAE3 211 aa2□□□□□ -2.09
SF3B1-210ENST00000482158 CBLN4Q9NTU7 201 aa2□□□□□ -2.09
SF3B1-210ENST00000482158 PRO2289Q9P1D8 64 aa2□□□□□ -2.09
SF3B1-210ENST00000482158 FAM215AQ9Y5M1 114 aa2□□□□□ -2.09
SF3B1-210ENST00000482158 SOX21Q9Y651 276 aaPredicted RBP2□□□□□ -2.09
SF3B1-210ENST00000482158 PSME4Q14997 1843 aa2□□□□□ -2.09
SF3B1-210ENST00000482158 NCAPD3P42695 1498 aa2□□□□□ -2.09
SF3B1-210ENST00000482158 LRRIQ1Q96JM4 1722 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms