RNA–Protein interactions for RNA: ENST00000481786.1

USH2A-204, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-204ENST00000481786 RLN2P04090 185 aa1.14□□□□□ -2.23
USH2A-204ENST00000481786 GLAP06280 429 aa1.14□□□□□ -2.23
USH2A-204ENST00000481786 KRTAP2-3P0C7H8 128 aa1.14□□□□□ -2.23
USH2A-204ENST00000481786 UBCP0CG48 685 aaKnown RBP1.14□□□□□ -2.23
USH2A-204ENST00000481786 SAA1P0DJI8 122 aaPredicted RBP1.14□□□□□ -2.23
USH2A-204ENST00000481786 CRISP2P16562 243 aa1.14□□□□□ -2.23
USH2A-204ENST00000481786 ATP6V1B2P21281 511 aa1.14□□□□□ -2.23
USH2A-204ENST00000481786 NPPCP23582 126 aa1.14□□□□□ -2.23
USH2A-204ENST00000481786 RPL27AP46776 148 aaKnown RBP1.14□□□□□ -2.23
USH2A-204ENST00000481786 P2RY1P47900 373 aa1.14□□□□□ -2.23
USH2A-204ENST00000481786 HCCSP53701 268 aa1.14□□□□□ -2.23
USH2A-204ENST00000481786 SMIM11AP58511 58 aa1.14□□□□□ -2.23
USH2A-204ENST00000481786 TAS2R60P59551 318 aa1.14□□□□□ -2.23
USH2A-204ENST00000481786 SNRPGP62308 76 aaKnown RBP1.14□□□□□ -2.23
USH2A-204ENST00000481786 SLAQ13239 276 aa1.14□□□□□ -2.23
USH2A-204ENST00000481786 CIRBPQ14011 172 aaKnown RBP1.14□□□□□ -2.23
USH2A-204ENST00000481786 RCN1Q15293 331 aa1.14□□□□□ -2.23
USH2A-204ENST00000481786 HMGN3Q15651 99 aa1.14□□□□□ -2.23
USH2A-204ENST00000481786 SSX1Q16384 188 aa1.14□□□□□ -2.23
USH2A-204ENST00000481786 ZSCAN26Q16670 478 aa1.14□□□□□ -2.23
USH2A-204ENST00000481786 TPRXLQ17RH7 258 aa1.14□□□□□ -2.23
USH2A-204ENST00000481786 LRRC23Q53EV4 343 aaPredicted RBP1.14□□□□□ -2.23
USH2A-204ENST00000481786 Q56UQ5 140 aa1.14□□□□□ -2.23
USH2A-204ENST00000481786 FOXI2Q6ZQN5 318 aa1.14□□□□□ -2.23
USH2A-204ENST00000481786 ACOT7LQ6ZUV0 252 aa1.14□□□□□ -2.23
USH2A-204ENST00000481786 TRMT10CQ7L0Y3 403 aaKnown RBP1.14□□□□□ -2.23
USH2A-204ENST00000481786 TMEM144Q7Z5S9 345 aa1.14□□□□□ -2.23
USH2A-204ENST00000481786 VTCN1Q7Z7D3 282 aa1.14□□□□□ -2.23
USH2A-204ENST00000481786 FUNDC1Q8IVP5 155 aa1.14□□□□□ -2.23
USH2A-204ENST00000481786 TMEM256Q8N2U0 113 aa1.14□□□□□ -2.23
USH2A-204ENST00000481786 UBAC2Q8NBM4 344 aa1.14□□□□□ -2.23
USH2A-204ENST00000481786 OR52E5Q8NH55 327 aa1.14□□□□□ -2.23
USH2A-204ENST00000481786 ATP6V0E2Q8NHE4 81 aa1.14□□□□□ -2.23
USH2A-204ENST00000481786 GNPDA2Q8TDQ7 276 aa1.14□□□□□ -2.23
USH2A-204ENST00000481786 TNFAIP8L1Q8WVP5 186 aa1.14□□□□□ -2.23
USH2A-204ENST00000481786 BAALCQ8WXS3 180 aa1.14□□□□□ -2.23
USH2A-204ENST00000481786 ADAT3Q96EY9 351 aaPredicted RBP1.14□□□□□ -2.23
USH2A-204ENST00000481786 ZC2HC1AQ96GY0 325 aa1.14□□□□□ -2.23
USH2A-204ENST00000481786 NARS2Q96I59 477 aaKnown RBP1.14□□□□□ -2.23
USH2A-204ENST00000481786 FMO2Q99518 471 aa1.14□□□□□ -2.23
USH2A-204ENST00000481786 CGREF1Q99674 301 aa1.14□□□□□ -2.23
USH2A-204ENST00000481786 KRTAP2-4Q9BYR9 128 aa1.14□□□□□ -2.23
USH2A-204ENST00000481786 FAM192AQ9GZU8 254 aa1.14□□□□□ -2.23
USH2A-204ENST00000481786 NXF2Q9GZY0 626 aaKnown RBP1.14□□□□□ -2.23
USH2A-204ENST00000481786 SLC35B3Q9H1N7 401 aa1.14□□□□□ -2.23
USH2A-204ENST00000481786 OR51E2Q9H255 320 aa1.14□□□□□ -2.23
USH2A-204ENST00000481786 OR51V1Q9H2C8 321 aa1.14□□□□□ -2.23
USH2A-204ENST00000481786 SAV1Q9H4B6 383 aaPredicted RBP1.14□□□□□ -2.23
USH2A-204ENST00000481786 NOP10Q9NPE3 64 aaKnown RBP1.14□□□□□ -2.23
USH2A-204ENST00000481786 CMC2Q9NRP2 79 aa1.14□□□□□ -2.23
USH2A-204ENST00000481786 RDH8Q9NYR8 311 aa1.14□□□□□ -2.23
USH2A-204ENST00000481786 WARS2Q9UGM6 360 aaKnown RBP1.14□□□□□ -2.23
USH2A-204ENST00000481786 IKZF2Q9UKS7 526 aa1.14□□□□□ -2.23
USH2A-204ENST00000481786 ENPP4Q9Y6X5 453 aa1.14□□□□□ -2.23
USH2A-204ENST00000481786 IGLV1-50A0A075B6I6 118 aa1.13□□□□□ -2.23
USH2A-204ENST00000481786 TRAV1-1A0A0B4J248 108 aa1.13□□□□□ -2.23
USH2A-204ENST00000481786 LOC107986453A0A1B0GWG9 222 aa1.13□□□□□ -2.23
USH2A-204ENST00000481786 IGLC7A0M8Q6 106 aa1.13□□□□□ -2.23
USH2A-204ENST00000481786 M0R2T5 61 aa1.13□□□□□ -2.23
USH2A-204ENST00000481786 GABRPO00591 440 aa1.13□□□□□ -2.23
USH2A-204ENST00000481786 ANGPT2O15123 496 aa1.13□□□□□ -2.23
USH2A-204ENST00000481786 BIRC5O15392 142 aa1.13□□□□□ -2.23
USH2A-204ENST00000481786 SPAG7O75391 227 aa1.13□□□□□ -2.23
USH2A-204ENST00000481786 RPP14O95059 124 aaKnown RBP1.13□□□□□ -2.23
USH2A-204ENST00000481786 GADD45GO95257 159 aa1.13□□□□□ -2.23
USH2A-204ENST00000481786 CRYZL1O95825 349 aa1.13□□□□□ -2.23
USH2A-204ENST00000481786 PRM2P04554 102 aa1.13□□□□□ -2.23
USH2A-204ENST00000481786 KRT8P05787 483 aa1.13□□□□□ -2.23
USH2A-204ENST00000481786 GTF2F2P13984 249 aa1.13□□□□□ -2.23
USH2A-204ENST00000481786 CD36P16671 472 aa1.13□□□□□ -2.23
USH2A-204ENST00000481786 TBPP20226 339 aa1.13□□□□□ -2.23
USH2A-204ENST00000481786 CRYBB3P26998 211 aa1.13□□□□□ -2.23
USH2A-204ENST00000481786 SRIP30626 198 aa1.13□□□□□ -2.23
USH2A-204ENST00000481786 CEACAM6P40199 344 aa1.13□□□□□ -2.23
USH2A-204ENST00000481786 RORCP51449 518 aa1.13□□□□□ -2.23
USH2A-204ENST00000481786 MNAT1P51948 309 aa1.13□□□□□ -2.23
USH2A-204ENST00000481786 PSME3P61289 254 aa1.13□□□□□ -2.23
USH2A-204ENST00000481786 GPR176Q14439 515 aa1.13□□□□□ -2.23
USH2A-204ENST00000481786 ARL6IP1Q15041 203 aa1.13□□□□□ -2.23
USH2A-204ENST00000481786 ASB16-AS1Q495Z4 193 aa1.13□□□□□ -2.23
USH2A-204ENST00000481786 C1orf100Q5SVJ3 147 aa1.13□□□□□ -2.23
USH2A-204ENST00000481786 GDF5OSQ5U4N7 250 aa1.13□□□□□ -2.23
USH2A-204ENST00000481786 TMEM244Q5VVB8 128 aa1.13□□□□□ -2.23
USH2A-204ENST00000481786 TTC23Q5W5X9 447 aa1.13□□□□□ -2.23
USH2A-204ENST00000481786 RAB12Q6IQ22 244 aa1.13□□□□□ -2.23
USH2A-204ENST00000481786 EBLN2Q6P2I7 272 aa1.13□□□□□ -2.23
USH2A-204ENST00000481786 ZNF322Q6U7Q0 402 aaPredicted RBP1.13□□□□□ -2.23
USH2A-204ENST00000481786 IGFL1Q6UW32 110 aa1.13□□□□□ -2.23
USH2A-204ENST00000481786 TOMM20LQ6UXN7 152 aa1.13□□□□□ -2.23
USH2A-204ENST00000481786 SDIM1Q6ZPB5 146 aa1.13□□□□□ -2.23
USH2A-204ENST00000481786 RASSF6Q6ZTQ3 369 aa1.13□□□□□ -2.23
USH2A-204ENST00000481786 SSX6Q7RTT6 188 aa1.13□□□□□ -2.23
USH2A-204ENST00000481786 TMEM17Q86X19 198 aa1.13□□□□□ -2.23
USH2A-204ENST00000481786 DHFR2Q86XF0 187 aa1.13□□□□□ -2.23
USH2A-204ENST00000481786 GDPD1Q8N9F7 314 aa1.13□□□□□ -2.23
USH2A-204ENST00000481786 C9orf163Q8N9P6 203 aa1.13□□□□□ -2.23
USH2A-204ENST00000481786 MNS1Q8NEH6 495 aa1.13□□□□□ -2.23
USH2A-204ENST00000481786 ZNF555Q8NEP9 628 aa1.13□□□□□ -2.23
USH2A-204ENST00000481786 OR8J3Q8NGG0 315 aa1.13□□□□□ -2.23
USH2A-204ENST00000481786 OR51A2Q8NGJ7 313 aa1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms