RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 ORAOV1Q8WV07 137 aa2.19□□□□□ -2.06
SMC6-208ENST00000481708 TRAPPC2LQ9UL33 140 aa2.19□□□□□ -2.06
SMC6-208ENST00000481708 CACNA1CQ13936 2221 aa2.19□□□□□ -2.06
SMC6-208ENST00000481708 IGHV3-11P01762 117 aa2.19□□□□□ -2.06
SMC6-208ENST00000481708 CRISP2P16562 243 aa2.19□□□□□ -2.06
SMC6-208ENST00000481708 SPI1P17947 270 aa2.19□□□□□ -2.06
SMC6-208ENST00000481708 FA2HQ7L5A8 372 aa2.19□□□□□ -2.06
SMC6-208ENST00000481708 ZNF101Q8IZC7 436 aa2.19□□□□□ -2.06
SMC6-208ENST00000481708 ANKRD29Q8N6D5 301 aa2.19□□□□□ -2.06
SMC6-208ENST00000481708 WFDC11Q8NEX6 87 aa2.19□□□□□ -2.06
SMC6-208ENST00000481708 CAPZA3Q96KX2 299 aa2.19□□□□□ -2.06
SMC6-208ENST00000481708 DHCR7Q9UBM7 475 aaKnown RBP2.19□□□□□ -2.06
SMC6-208ENST00000481708 AGRNO00468 2067 aa2.19□□□□□ -2.06
SMC6-208ENST00000481708 IGHV3-64DA0A0J9YX35 117 aa2.18□□□□□ -2.06
SMC6-208ENST00000481708 PANO1I0J062 215 aa2.18□□□□□ -2.06
SMC6-208ENST00000481708 COX7A2LO14548 114 aa2.18□□□□□ -2.06
SMC6-208ENST00000481708 GYPCP04921 128 aa2.18□□□□□ -2.06
SMC6-208ENST00000481708 DDTP30046 118 aa2.18□□□□□ -2.06
SMC6-208ENST00000481708 POLR2HP52434 150 aaKnown RBP2.18□□□□□ -2.06
SMC6-208ENST00000481708 EBPQ15125 230 aaKnown RBP2.18□□□□□ -2.06
SMC6-208ENST00000481708 RHEBQ15382 184 aa2.18□□□□□ -2.06
SMC6-208ENST00000481708 MORN3Q6PF18 240 aaPredicted RBP2.18□□□□□ -2.06
SMC6-208ENST00000481708 OR5H2Q8NGV7 314 aa2.18□□□□□ -2.06
SMC6-208ENST00000481708 YPEL4Q96NS1 127 aa2.18□□□□□ -2.06
SMC6-208ENST00000481708 SERPINI1Q99574 410 aa2.18□□□□□ -2.06
SMC6-208ENST00000481708 CCDC32Q9BV29 185 aa2.18□□□□□ -2.06
SMC6-208ENST00000481708 PRTFDC1Q9NRG1 225 aa2.18□□□□□ -2.06
SMC6-208ENST00000481708 C9JQL5 133 aa2.18□□□□□ -2.06
SMC6-208ENST00000481708 PLA2G10O15496 165 aa2.18□□□□□ -2.06
SMC6-208ENST00000481708 ZNF432O94892 652 aa2.18□□□□□ -2.06
SMC6-208ENST00000481708 CXorf1O96002 111 aa2.18□□□□□ -2.06
SMC6-208ENST00000481708 SMIM17P0DL12 118 aa2.18□□□□□ -2.06
SMC6-208ENST00000481708 INPP1P49441 399 aa2.18□□□□□ -2.06
SMC6-208ENST00000481708 GABARAPL2P60520 117 aa2.18□□□□□ -2.06
SMC6-208ENST00000481708 LGALS9BQ3B8N2 356 aa2.18□□□□□ -2.06
SMC6-208ENST00000481708 LGALS9CQ6DKI2 356 aa2.18□□□□□ -2.06
SMC6-208ENST00000481708 MYO7BQ6PIF6 2116 aa2.18□□□□□ -2.06
SMC6-208ENST00000481708 MDP1Q86V88 176 aa2.18□□□□□ -2.06
SMC6-208ENST00000481708 GNPNAT1Q96EK6 184 aaPredicted RBP2.18□□□□□ -2.06
SMC6-208ENST00000481708 A0A1B0GVY2 172 aa2.18□□□□□ -2.06
SMC6-208ENST00000481708 FAM168BA1KXE4 195 aa2.18□□□□□ -2.06
SMC6-208ENST00000481708 A8MT66 165 aa2.18□□□□□ -2.06
SMC6-208ENST00000481708 DEGS1O15121 323 aa2.18□□□□□ -2.06
SMC6-208ENST00000481708 CRIP2P52943 208 aaPredicted RBP2.18□□□□□ -2.06
SMC6-208ENST00000481708 TOMM20LQ6UXN7 152 aa2.18□□□□□ -2.06
SMC6-208ENST00000481708 FAM24BQ8N5W8 94 aa2.18□□□□□ -2.06
SMC6-208ENST00000481708 OR9Q1Q8NGQ5 310 aa2.18□□□□□ -2.06
SMC6-208ENST00000481708 OR8S1Q8NH09 359 aa2.18□□□□□ -2.06
SMC6-208ENST00000481708 RAB2BQ8WUD1 216 aa2.18□□□□□ -2.06
SMC6-208ENST00000481708 LINC00470Q9BZP3 86 aa2.18□□□□□ -2.06
SMC6-208ENST00000481708 NOX3Q9HBY0 568 aa2.18□□□□□ -2.06
SMC6-208ENST00000481708 MAP1AP78559 2803 aaPredicted RBP2.18□□□□□ -2.06
SMC6-208ENST00000481708 TRAV8-1A0A0A6YYK1 113 aa2.17□□□□□ -2.06
SMC6-208ENST00000481708 OR5H14A6NHG9 310 aa2.17□□□□□ -2.06
SMC6-208ENST00000481708 SDC4P31431 198 aa2.17□□□□□ -2.06
SMC6-208ENST00000481708 KRTAP10-3P60369 221 aa2.17□□□□□ -2.06
SMC6-208ENST00000481708 HIST1H1AQ02539 215 aaPredicted RBP2.17□□□□□ -2.06
SMC6-208ENST00000481708 PLCXD2Q0VAA5 305 aa2.17□□□□□ -2.06
SMC6-208ENST00000481708 AKR1C8PQ5T2L2 129 aa2.17□□□□□ -2.06
SMC6-208ENST00000481708 RPL13AP3Q6NVV1 102 aa2.17□□□□□ -2.06
SMC6-208ENST00000481708 ZFP1Q6P2D0 407 aa2.17□□□□□ -2.06
SMC6-208ENST00000481708 WFDC9Q8NEX5 89 aa2.17□□□□□ -2.06
SMC6-208ENST00000481708 TRAV41A0A0B4J266 112 aa2.17□□□□□ -2.06
SMC6-208ENST00000481708 A0A0X1KG70 313 aa2.17□□□□□ -2.06
SMC6-208ENST00000481708 TAS2R30P59541 319 aa2.17□□□□□ -2.06
SMC6-208ENST00000481708 RAP1AP62834 184 aa2.17□□□□□ -2.06
SMC6-208ENST00000481708 KISS1Q15726 138 aa2.17□□□□□ -2.06
SMC6-208ENST00000481708 POM121L12Q8N7R1 296 aa2.17□□□□□ -2.06
SMC6-208ENST00000481708 OR51H1Q8NH63 302 aa2.17□□□□□ -2.06
SMC6-208ENST00000481708 ROPN1LQ96C74 230 aa2.17□□□□□ -2.06
SMC6-208ENST00000481708 PLEKHB2Q96CS7 222 aa2.17□□□□□ -2.06
SMC6-208ENST00000481708 C12orf57Q99622 126 aa2.17□□□□□ -2.06
SMC6-208ENST00000481708 NAA38Q9BRA0 125 aaKnown RBP2.17□□□□□ -2.06
SMC6-208ENST00000481708 SSR3Q9UNL2 185 aa2.17□□□□□ -2.06
SMC6-208ENST00000481708 HEY1Q9Y5J3 304 aa2.17□□□□□ -2.06
SMC6-208ENST00000481708 MEIKINA0A087WXM9 373 aa2.17□□□□□ -2.06
SMC6-208ENST00000481708 A0A0G2JMM0 328 aa2.17□□□□□ -2.06
SMC6-208ENST00000481708 A0A1W2PPB8 328 aa2.17□□□□□ -2.06
SMC6-208ENST00000481708 A0A1W2PRS3 328 aa2.17□□□□□ -2.06
SMC6-208ENST00000481708 KIR3DP1A8MWS1 328 aa2.17□□□□□ -2.06
SMC6-208ENST00000481708 LY6LH3BQJ8 138 aa2.17□□□□□ -2.06
SMC6-208ENST00000481708 CDRT1O95170 752 aa2.17□□□□□ -2.06
SMC6-208ENST00000481708 OPRK1P41145 380 aa2.17□□□□□ -2.06
SMC6-208ENST00000481708 RRAS2P62070 204 aaPredicted RBP2.17□□□□□ -2.06
SMC6-208ENST00000481708 RPS11P62280 158 aaKnown RBP eCLIP2.17□□□□□ -2.06
SMC6-208ENST00000481708 HNRNPA0Q13151 305 aaKnown RBP2.17□□□□□ -2.06
SMC6-208ENST00000481708 ZNF181Q2M3W8 571 aa2.17□□□□□ -2.06
SMC6-208ENST00000481708 C14orf177Q52M58 125 aa2.17□□□□□ -2.06
SMC6-208ENST00000481708 ANGPTL5Q86XS5 388 aa2.17□□□□□ -2.06
SMC6-208ENST00000481708 RPRMLQ8N4K4 120 aa2.17□□□□□ -2.06
SMC6-208ENST00000481708 ZDHHC22Q8N966 263 aa2.17□□□□□ -2.06
SMC6-208ENST00000481708 OR5C1Q8NGR4 320 aa2.17□□□□□ -2.06
SMC6-208ENST00000481708 MS4A6EQ96DS6 147 aa2.17□□□□□ -2.06
SMC6-208ENST00000481708 TPT1P8Q9HAU6 139 aa2.17□□□□□ -2.06
SMC6-208ENST00000481708 RNF11Q9Y3C5 154 aa2.17□□□□□ -2.06
SMC6-208ENST00000481708 CADP27708 2225 aa2.17□□□□□ -2.06
SMC6-208ENST00000481708 IGLV3-9A0A075B6K5 115 aa2.17□□□□□ -2.06
SMC6-208ENST00000481708 A0A087WUU8 490 aa2.17□□□□□ -2.06
SMC6-208ENST00000481708 IGHV3-66A0A0C4DH42 116 aa2.17□□□□□ -2.06
SMC6-208ENST00000481708 LOC100130705A0A1B0GUX0 176 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms