RNA–Protein interactions for RNA: ENST00000479099.2

RC3H1-204, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-204ENST00000479099 CHCHD2Q9Y6H1 151 aaPredicted RBP3.89□□□□□ -1.79
RC3H1-204ENST00000479099 TDRD6O60522 2096 aaKnown RBP3.89□□□□□ -1.79
RC3H1-204ENST00000479099 ARHGEF28Q8N1W1 1705 aaKnown RBP3.89□□□□□ -1.79
RC3H1-204ENST00000479099 ANAPC1Q9H1A4 1944 aa3.88□□□□□ -1.79
RC3H1-204ENST00000479099 COL1A1P02452 1464 aaPredicted RBP3.88□□□□□ -1.79
RC3H1-204ENST00000479099 A0A0J9YW62 118 aa3.88□□□□□ -1.79
RC3H1-204ENST00000479099 FAM168BA1KXE4 195 aa3.88□□□□□ -1.79
RC3H1-204ENST00000479099 C19orf71A6NCJ1 209 aa3.88□□□□□ -1.79
RC3H1-204ENST00000479099 H3BQF6 201 aa3.88□□□□□ -1.79
RC3H1-204ENST00000479099 GZMBP10144 247 aa3.88□□□□□ -1.79
RC3H1-204ENST00000479099 IFITM1P13164 125 aa3.88□□□□□ -1.79
RC3H1-204ENST00000479099 ZNF19P17023 458 aa3.88□□□□□ -1.79
RC3H1-204ENST00000479099 CRIP2P52943 208 aaPredicted RBP3.88□□□□□ -1.79
RC3H1-204ENST00000479099 FOXA1P55317 472 aa3.88□□□□□ -1.79
RC3H1-204ENST00000479099 ZNF90Q03938 601 aa3.88□□□□□ -1.79
RC3H1-204ENST00000479099 PYY3Q5JQD4 70 aa3.88□□□□□ -1.79
RC3H1-204ENST00000479099 LCE1EQ5T753 118 aa3.88□□□□□ -1.79
RC3H1-204ENST00000479099 ZC2HC1BQ5TFG8 222 aa3.88□□□□□ -1.79
RC3H1-204ENST00000479099 ZNF660Q6AZW8 331 aaPredicted RBP3.88□□□□□ -1.79
RC3H1-204ENST00000479099 NOXRED1Q6NXP6 359 aa3.88□□□□□ -1.79
RC3H1-204ENST00000479099 MRPL54Q6P161 138 aaKnown RBP3.88□□□□□ -1.79
RC3H1-204ENST00000479099 PATE2Q6UY27 113 aa3.88□□□□□ -1.79
RC3H1-204ENST00000479099 SOSTDC1Q6X4U4 206 aa3.88□□□□□ -1.79
RC3H1-204ENST00000479099 TYMSOSQ8TAI1 123 aa3.88□□□□□ -1.79
RC3H1-204ENST00000479099 COPS9Q8WXC6 57 aa3.88□□□□□ -1.79
RC3H1-204ENST00000479099 AGPAT4-IT1Q9H0P7 198 aa3.88□□□□□ -1.79
RC3H1-204ENST00000479099 SLC35B3Q9H1N7 401 aa3.88□□□□□ -1.79
RC3H1-204ENST00000479099 SAR1AQ9NR31 198 aa3.88□□□□□ -1.79
RC3H1-204ENST00000479099 TRAPPC1Q9Y5R8 145 aa3.88□□□□□ -1.79
RC3H1-204ENST00000479099 RIMBP3CA6NJZ7 1639 aa3.88□□□□□ -1.79
RC3H1-204ENST00000479099 RIMBP3BA6NNM3 1639 aa3.88□□□□□ -1.79
RC3H1-204ENST00000479099 KTN1Q86UP2 1357 aaKnown RBP3.88□□□□□ -1.79
RC3H1-204ENST00000479099 RIMBP3Q9UFD9 1639 aa3.88□□□□□ -1.79
RC3H1-204ENST00000479099 ALPK3Q96L96 1907 aa3.87□□□□□ -1.79
RC3H1-204ENST00000479099 MYH13Q9UKX3 1938 aa3.87□□□□□ -1.79
RC3H1-204ENST00000479099 NISCHQ9Y2I1 1504 aa3.87□□□□□ -1.79
RC3H1-204ENST00000479099 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.87□□□□□ -1.79
RC3H1-204ENST00000479099 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.87□□□□□ -1.79
RC3H1-204ENST00000479099 OR51F1A6NGY5 319 aa3.87□□□□□ -1.79
RC3H1-204ENST00000479099 GEMIN2O14893 280 aaKnown RBP3.87□□□□□ -1.79
RC3H1-204ENST00000479099 LSM3P62310 102 aaKnown RBP3.87□□□□□ -1.79
RC3H1-204ENST00000479099 Q56UQ5 140 aa3.87□□□□□ -1.79
RC3H1-204ENST00000479099 SDIM1Q6ZPB5 146 aa3.87□□□□□ -1.79
RC3H1-204ENST00000479099 SLC35E3Q7Z769 313 aa3.87□□□□□ -1.79
RC3H1-204ENST00000479099 SPANXA2-OT1Q8N9U9 137 aa3.87□□□□□ -1.79
RC3H1-204ENST00000479099 LCN9Q8WX39 176 aa3.87□□□□□ -1.79
RC3H1-204ENST00000479099 SMDT1Q9H4I9 107 aa3.87□□□□□ -1.79
RC3H1-204ENST00000479099 LSM2Q9Y333 95 aaKnown RBP3.87□□□□□ -1.79
RC3H1-204ENST00000479099 ADGRB1O14514 1584 aa3.87□□□□□ -1.79
RC3H1-204ENST00000479099 GLI3P10071 1580 aa3.87□□□□□ -1.79
RC3H1-204ENST00000479099 LTBP1Q14766 1721 aa3.87□□□□□ -1.79
RC3H1-204ENST00000479099 CFTRP13569 1480 aa3.86□□□□□ -1.79
RC3H1-204ENST00000479099 POLEQ07864 2286 aa3.86□□□□□ -1.79
RC3H1-204ENST00000479099 IGLV3-9A0A075B6K5 115 aa3.86□□□□□ -1.79
RC3H1-204ENST00000479099 PINLYPA6NC86 204 aa3.86□□□□□ -1.79
RC3H1-204ENST00000479099 TCL1BO95988 128 aa3.86□□□□□ -1.79
RC3H1-204ENST00000479099 LHBP01229 141 aa3.86□□□□□ -1.79
RC3H1-204ENST00000479099 UBE2SQ16763 222 aa3.86□□□□□ -1.79
RC3H1-204ENST00000479099 CLLU1Q5K131 121 aa3.86□□□□□ -1.79
RC3H1-204ENST00000479099 GFI1BQ5VTD9 330 aa3.86□□□□□ -1.79
RC3H1-204ENST00000479099 Q8N2B8 174 aa3.86□□□□□ -1.79
RC3H1-204ENST00000479099 RBMXL1Q96E39 390 aaKnown RBP3.86□□□□□ -1.79
RC3H1-204ENST00000479099 LINC00526Q96FQ7 95 aa3.86□□□□□ -1.79
RC3H1-204ENST00000479099 ICOSQ9Y6W8 199 aa3.86□□□□□ -1.79
RC3H1-204ENST00000479099 U3KQK5 164 aa3.86□□□□□ -1.79
RC3H1-204ENST00000479099 ANKRD36BQ8N2N9 1353 aa3.86□□□□□ -1.79
RC3H1-204ENST00000479099 KIF26AQ9ULI4 1882 aaPredicted RBP3.86□□□□□ -1.79
RC3H1-204ENST00000479099 RPRD2Q5VT52 1461 aaKnown RBP3.86□□□□□ -1.79
RC3H1-204ENST00000479099 MAP3K1Q13233 1512 aa3.85□□□□□ -1.79
RC3H1-204ENST00000479099 BAZ1AQ9NRL2 1556 aaPredicted RBP3.85□□□□□ -1.79
RC3H1-204ENST00000479099 IGKV1OR2-108A0A075B7D4 117 aa3.85□□□□□ -1.79
RC3H1-204ENST00000479099 A8MUU9 505 aa3.85□□□□□ -1.79
RC3H1-204ENST00000479099 H3BT86 120 aa3.85□□□□□ -1.79
RC3H1-204ENST00000479099 OR1I1O60431 355 aa3.85□□□□□ -1.79
RC3H1-204ENST00000479099 PITX3O75364 302 aa3.85□□□□□ -1.79
RC3H1-204ENST00000479099 ZNF432O94892 652 aa3.85□□□□□ -1.79
RC3H1-204ENST00000479099 CTSDP07339 412 aaPredicted RBP3.85□□□□□ -1.79
RC3H1-204ENST00000479099 UBA52P62987 128 aaKnown RBP3.85□□□□□ -1.79
RC3H1-204ENST00000479099 DYNLT1P63172 113 aa3.85□□□□□ -1.79
RC3H1-204ENST00000479099 Q6ZUT4 128 aa3.85□□□□□ -1.79
RC3H1-204ENST00000479099 SVBPQ8N300 66 aa3.85□□□□□ -1.79
RC3H1-204ENST00000479099 MUC7Q8TAX7 377 aa3.85□□□□□ -1.79
RC3H1-204ENST00000479099 GINS4Q9BRT9 223 aa3.85□□□□□ -1.79
RC3H1-204ENST00000479099 SEC11CQ9BY50 192 aa3.85□□□□□ -1.79
RC3H1-204ENST00000479099 CCDC88AQ3V6T2 1871 aa3.85□□□□□ -1.79
RC3H1-204ENST00000479099 FRMPD1Q5SYB0 1578 aa3.85□□□□□ -1.79
RC3H1-204ENST00000479099 IGHV3-15A0A0B4J1V0 119 aa3.84□□□□□ -1.79
RC3H1-204ENST00000479099 IGHV3-73A0A0B4J1V6 119 aa3.84□□□□□ -1.79
RC3H1-204ENST00000479099 TCRBV3S1A0A5B6 114 aa3.84□□□□□ -1.79
RC3H1-204ENST00000479099 PLXNB1O43157 2135 aa3.84□□□□□ -1.79
RC3H1-204ENST00000479099 PMP2P02689 132 aa3.84□□□□□ -1.79
RC3H1-204ENST00000479099 CD3DP04234 171 aa3.84□□□□□ -1.79
RC3H1-204ENST00000479099 MSMBP08118 114 aa3.84□□□□□ -1.79
RC3H1-204ENST00000479099 CRYGAP11844 174 aa3.84□□□□□ -1.79
RC3H1-204ENST00000479099 CCL4P13236 92 aa3.84□□□□□ -1.79
RC3H1-204ENST00000479099 TPT1P13693 172 aaKnown RBP3.84□□□□□ -1.79
RC3H1-204ENST00000479099 CD24P25063 80 aa3.84□□□□□ -1.79
RC3H1-204ENST00000479099 MT3P25713 68 aa3.84□□□□□ -1.79
RC3H1-204ENST00000479099 IGLV3-21P80748 117 aaPredicted RBP3.84□□□□□ -1.79
RC3H1-204ENST00000479099 MRPS36P82909 103 aaKnown RBP3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms