RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 CLEC7AQ9BXN2 247 aa3.94□□□□□ -1.78
SF3B6-202ENST00000478050 PRO1933Q9H354 126 aa3.94□□□□□ -1.78
SF3B6-202ENST00000478050 FNDC4Q9H6D8 234 aaPredicted RBP3.94□□□□□ -1.78
SF3B6-202ENST00000478050 ZNF355PQ9NSJ1 428 aa3.94□□□□□ -1.78
SF3B6-202ENST00000478050 FLNAP21333 2647 aaKnown RBP3.94□□□□□ -1.78
SF3B6-202ENST00000478050 PLXNB1O43157 2135 aa3.94□□□□□ -1.78
SF3B6-202ENST00000478050 AKAP9Q99996 3911 aa3.93□□□□□ -1.78
SF3B6-202ENST00000478050 IGHV2-26A0A0B4J1V2 119 aa3.93□□□□□ -1.78
SF3B6-202ENST00000478050 TRAV5A0A0B4J249 113 aa3.93□□□□□ -1.78
SF3B6-202ENST00000478050 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.93□□□□□ -1.78
SF3B6-202ENST00000478050 SMIM27A0A1W2PRY6 76 aa3.93□□□□□ -1.78
SF3B6-202ENST00000478050 IGLC7A0M8Q6 106 aa3.93□□□□□ -1.78
SF3B6-202ENST00000478050 IZUMO1RA6ND01 250 aa3.93□□□□□ -1.78
SF3B6-202ENST00000478050 A8MWP6 167 aa3.93□□□□□ -1.78
SF3B6-202ENST00000478050 FCN1O00602 326 aa3.93□□□□□ -1.78
SF3B6-202ENST00000478050 PEX7O00628 323 aa3.93□□□□□ -1.78
SF3B6-202ENST00000478050 SCGB1D1O95968 90 aa3.93□□□□□ -1.78
SF3B6-202ENST00000478050 IGLV1-47P01700 117 aa3.93□□□□□ -1.78
SF3B6-202ENST00000478050 IGLV2-8P01709 118 aa3.93□□□□□ -1.78
SF3B6-202ENST00000478050 MGST1P10620 155 aaKnown RBP3.93□□□□□ -1.78
SF3B6-202ENST00000478050 GCSHP23434 173 aa3.93□□□□□ -1.78
SF3B6-202ENST00000478050 IER3P46695 156 aa3.93□□□□□ -1.78
SF3B6-202ENST00000478050 PLP1P60201 277 aa3.93□□□□□ -1.78
SF3B6-202ENST00000478050 SSBP2P81877 361 aaPredicted RBP3.93□□□□□ -1.78
SF3B6-202ENST00000478050 TNXAQ16473 311 aa3.93□□□□□ -1.78
SF3B6-202ENST00000478050 MRGPRG-AS1Q2M3A8 158 aa3.93□□□□□ -1.78
SF3B6-202ENST00000478050 OR10J3Q5JRS4 329 aa3.93□□□□□ -1.78
SF3B6-202ENST00000478050 C10orf55Q5SWW7 151 aa3.93□□□□□ -1.78
SF3B6-202ENST00000478050 PATE2Q6UY27 113 aa3.93□□□□□ -1.78
SF3B6-202ENST00000478050 TMEM136Q6ZRR5 245 aa3.93□□□□□ -1.78
SF3B6-202ENST00000478050 ZNF329Q86UD4 541 aa3.93□□□□□ -1.78
SF3B6-202ENST00000478050 PRIMA1Q86XR5 153 aa3.93□□□□□ -1.78
SF3B6-202ENST00000478050 BAGE3Q86Y29 109 aa3.93□□□□□ -1.78
SF3B6-202ENST00000478050 BAGE2Q86Y30 109 aa3.93□□□□□ -1.78
SF3B6-202ENST00000478050 TMEM256Q8N2U0 113 aa3.93□□□□□ -1.78
SF3B6-202ENST00000478050 ZNF664Q8N3J9 261 aa3.93□□□□□ -1.78
SF3B6-202ENST00000478050 C11orf42Q8N5U0 333 aa3.93□□□□□ -1.78
SF3B6-202ENST00000478050 C8orf46Q8TAG6 207 aa3.93□□□□□ -1.78
SF3B6-202ENST00000478050 FXYD5Q96DB9 178 aa3.93□□□□□ -1.78
SF3B6-202ENST00000478050 GRAMD2BQ96HH9 432 aa3.93□□□□□ -1.78
SF3B6-202ENST00000478050 MS4A10Q96PG2 267 aa3.93□□□□□ -1.78
SF3B6-202ENST00000478050 NDUFAF3Q9BU61 184 aa3.93□□□□□ -1.78
SF3B6-202ENST00000478050 RNASE7Q9H1E1 156 aaKnown RBP3.93□□□□□ -1.78
SF3B6-202ENST00000478050 TNFRSF19Q9NS68 423 aa3.93□□□□□ -1.78
SF3B6-202ENST00000478050 TMEM160Q9NX00 188 aa3.93□□□□□ -1.78
SF3B6-202ENST00000478050 NAGKQ9UJ70 344 aa3.93□□□□□ -1.78
SF3B6-202ENST00000478050 INSIG2Q9Y5U4 225 aa3.93□□□□□ -1.78
SF3B6-202ENST00000478050 PPIAL4CA0A0B4J2A2 164 aa3.92□□□□□ -1.78
SF3B6-202ENST00000478050 IGHV1-3A0A0C4DH29 117 aa3.92□□□□□ -1.78
SF3B6-202ENST00000478050 KIR2DL5BA0A0G2JN68 375 aa3.92□□□□□ -1.78
SF3B6-202ENST00000478050 KIR2DL5BA0A0G2JPC4 375 aa3.92□□□□□ -1.78
SF3B6-202ENST00000478050 GRIFINA4D1Z8 144 aa3.92□□□□□ -1.78
SF3B6-202ENST00000478050 ZNF705FA8MVS1 300 aaPredicted RBP3.92□□□□□ -1.78
SF3B6-202ENST00000478050 KRTAP29-1A8MX34 341 aaPredicted RBP3.92□□□□□ -1.78
SF3B6-202ENST00000478050 BUB1B-PAK6H3BSN5 160 aa3.92□□□□□ -1.78
SF3B6-202ENST00000478050 HYPMO75409 117 aa3.92□□□□□ -1.78
SF3B6-202ENST00000478050 SERF1AO75920 110 aa3.92□□□□□ -1.78
SF3B6-202ENST00000478050 MOSP00540 346 aa3.92□□□□□ -1.78
SF3B6-202ENST00000478050 SLC25A5P05141 298 aaKnown RBP3.92□□□□□ -1.78
SF3B6-202ENST00000478050 ZNF705DP0CH99 300 aaPredicted RBP3.92□□□□□ -1.78
SF3B6-202ENST00000478050 ZNF705BP0CI00 300 aaPredicted RBP3.92□□□□□ -1.78
SF3B6-202ENST00000478050 PPIAL4GP0DN37 164 aa3.92□□□□□ -1.78
SF3B6-202ENST00000478050 PYYP10082 97 aa3.92□□□□□ -1.78
SF3B6-202ENST00000478050 HIST1H1EP10412 219 aaKnown RBP3.92□□□□□ -1.78
SF3B6-202ENST00000478050 BRS3P32247 399 aa3.92□□□□□ -1.78
SF3B6-202ENST00000478050 MYCNOSP40205 109 aa3.92□□□□□ -1.78
SF3B6-202ENST00000478050 CA7P43166 264 aa3.92□□□□□ -1.78
SF3B6-202ENST00000478050 UBE2G1P62253 170 aa3.92□□□□□ -1.78
SF3B6-202ENST00000478050 FXYD3Q14802 87 aa3.92□□□□□ -1.78
SF3B6-202ENST00000478050 USF2Q15853 346 aaPredicted RBP3.92□□□□□ -1.78
SF3B6-202ENST00000478050 TMEM183BQ1AE95 376 aa3.92□□□□□ -1.78
SF3B6-202ENST00000478050 PRR30Q53SZ7 412 aaPredicted RBP3.92□□□□□ -1.78
SF3B6-202ENST00000478050 C1orf194Q5T5A4 169 aa3.92□□□□□ -1.78
SF3B6-202ENST00000478050 MORN5Q5VZ52 161 aa3.92□□□□□ -1.78
SF3B6-202ENST00000478050 ZNF841Q6ZN19 808 aa3.92□□□□□ -1.78
SF3B6-202ENST00000478050 LINC00305Q7Z4B0 112 aa3.92□□□□□ -1.78
SF3B6-202ENST00000478050 PPP1R27Q86WC6 154 aa3.92□□□□□ -1.78
SF3B6-202ENST00000478050 KIR2DL5AQ8N109 375 aa3.92□□□□□ -1.78
SF3B6-202ENST00000478050 MUC15Q8N387 334 aa3.92□□□□□ -1.78
SF3B6-202ENST00000478050 LINC00469Q8N7U9 141 aa3.92□□□□□ -1.78
SF3B6-202ENST00000478050 TMEM116Q8NCL8 245 aa3.92□□□□□ -1.78
SF3B6-202ENST00000478050 ST6GALNAC3Q8NDV1 305 aa3.92□□□□□ -1.78
SF3B6-202ENST00000478050 OR8B3Q8NGG8 313 aa3.92□□□□□ -1.78
SF3B6-202ENST00000478050 WIPF2Q8TF74 440 aaPredicted RBP3.92□□□□□ -1.78
SF3B6-202ENST00000478050 RPEQ96AT9 228 aa3.92□□□□□ -1.78
SF3B6-202ENST00000478050 RBM14Q96PK6 669 aaKnown RBP3.92□□□□□ -1.78
SF3B6-202ENST00000478050 OR8B2Q96RD0 313 aa3.92□□□□□ -1.78
SF3B6-202ENST00000478050 NEU1Q99519 415 aa3.92□□□□□ -1.78
SF3B6-202ENST00000478050 C2orf88Q9BSF0 95 aa3.92□□□□□ -1.78
SF3B6-202ENST00000478050 ZNF331Q9NQX6 463 aaPredicted RBP3.92□□□□□ -1.78
SF3B6-202ENST00000478050 SERTAD4Q9NUC0 356 aa3.92□□□□□ -1.78
SF3B6-202ENST00000478050 MRPL36Q9P0J6 103 aaKnown RBP3.92□□□□□ -1.78
SF3B6-202ENST00000478050 NAT8BQ9UHF3 227 aa3.92□□□□□ -1.78
SF3B6-202ENST00000478050 TP53TG3Q9ULZ0 132 aa3.92□□□□□ -1.78
SF3B6-202ENST00000478050 EPDR1Q9UM22 224 aa3.92□□□□□ -1.78
SF3B6-202ENST00000478050 SIGLEC9Q9Y336 463 aa3.92□□□□□ -1.78
SF3B6-202ENST00000478050 F11RQ9Y624 299 aaKnown RBP3.92□□□□□ -1.78
SF3B6-202ENST00000478050 IGHV3-72A0A0B4J1Y9 119 aa3.91□□□□□ -1.78
SF3B6-202ENST00000478050 A0A1B0GUS0 222 aa3.91□□□□□ -1.78
SF3B6-202ENST00000478050 TEX22C9J3V5 150 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms