RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 ZNF98A6NK75 572 aa6.2□□□□□ -1.42
VMA21-203ENST00000477649 PPP5D1E7EU14 171 aa6.2□□□□□ -1.42
VMA21-203ENST00000477649 FSHBP01225 129 aa6.2□□□□□ -1.42
VMA21-203ENST00000477649 AMY1AP04745 511 aa6.2□□□□□ -1.42
VMA21-203ENST00000477649 SLC25A5P05141 298 aaKnown RBP6.2□□□□□ -1.42
VMA21-203ENST00000477649 IGLC2P0DOY2 106 aa6.2□□□□□ -1.42
VMA21-203ENST00000477649 IGHV4-31P0DP07 118 aa6.2□□□□□ -1.42
VMA21-203ENST00000477649 PYYP10082 97 aa6.2□□□□□ -1.42
VMA21-203ENST00000477649 UBE2G1P62253 170 aa6.2□□□□□ -1.42
VMA21-203ENST00000477649 PSG9Q00887 426 aa6.2□□□□□ -1.42
VMA21-203ENST00000477649 CENPWQ5EE01 88 aa6.2□□□□□ -1.42
VMA21-203ENST00000477649 FAM231DQ6ZW35 169 aa6.2□□□□□ -1.42
VMA21-203ENST00000477649 OCC1Q8TAD7 63 aa6.2□□□□□ -1.42
VMA21-203ENST00000477649 DERL1Q9BUN8 251 aa6.2□□□□□ -1.42
VMA21-203ENST00000477649 PRDM13Q9H4Q3 707 aa6.2□□□□□ -1.42
VMA21-203ENST00000477649 CLEC5AQ9NY25 188 aa6.2□□□□□ -1.42
VMA21-203ENST00000477649 HRNRQ86YZ3 2850 aaPredicted RBP6.2□□□□□ -1.42
VMA21-203ENST00000477649 TRBV20OR9-2A0A075B6H5 130 aa6.19□□□□□ -1.42
VMA21-203ENST00000477649 TRBV19A0A075B6N1 114 aa6.19□□□□□ -1.42
VMA21-203ENST00000477649 IGHV3OR16-10A0A075B7F0 116 aa6.19□□□□□ -1.42
VMA21-203ENST00000477649 CLEC3BP05452 202 aa6.19□□□□□ -1.42
VMA21-203ENST00000477649 CSN1S1P47710 185 aa6.19□□□□□ -1.42
VMA21-203ENST00000477649 RANP62826 216 aaKnown RBP6.19□□□□□ -1.42
VMA21-203ENST00000477649 BAGE2Q86Y30 109 aa6.19□□□□□ -1.42
VMA21-203ENST00000477649 NRGNQ92686 78 aa6.19□□□□□ -1.42
VMA21-203ENST00000477649 IGF2BP2-AS1Q96M15 143 aa6.19□□□□□ -1.42
VMA21-203ENST00000477649 Q9H3A6 140 aa6.19□□□□□ -1.42
VMA21-203ENST00000477649 SAV1Q9H4B6 383 aaPredicted RBP6.19□□□□□ -1.42
VMA21-203ENST00000477649 GSX1Q9H4S2 264 aaPredicted RBP6.19□□□□□ -1.42
VMA21-203ENST00000477649 AAMDCQ9H7C9 122 aa6.19□□□□□ -1.42
VMA21-203ENST00000477649 IL36BQ9NZH7 164 aa6.19□□□□□ -1.42
VMA21-203ENST00000477649 URGCP-MRPS24S4R325 110 aa6.19□□□□□ -1.42
VMA21-203ENST00000477649 ARHGAP32A7KAX9 2087 aa6.19□□□□□ -1.42
VMA21-203ENST00000477649 DOPEY2Q9Y3R5 2298 aa6.19□□□□□ -1.42
VMA21-203ENST00000477649 A0A087X0K7 114 aa6.18□□□□□ -1.42
VMA21-203ENST00000477649 OR2T8A6NH00 312 aa6.18□□□□□ -1.42
VMA21-203ENST00000477649 TCRAP04437 139 aa6.18□□□□□ -1.42
VMA21-203ENST00000477649 CXCL1P09341 107 aa6.18□□□□□ -1.42
VMA21-203ENST00000477649 PPIFP30405 207 aaKnown RBP6.18□□□□□ -1.42
VMA21-203ENST00000477649 IER3P46695 156 aa6.18□□□□□ -1.42
VMA21-203ENST00000477649 ERVFC1-1P60608 527 aa6.18□□□□□ -1.42
VMA21-203ENST00000477649 USF2Q15853 346 aaPredicted RBP6.18□□□□□ -1.42
VMA21-203ENST00000477649 CT83Q5H943 113 aa6.18□□□□□ -1.42
VMA21-203ENST00000477649 TMEM219Q86XT9 240 aa6.18□□□□□ -1.42
VMA21-203ENST00000477649 TMEM86BQ8N661 226 aa6.18□□□□□ -1.42
VMA21-203ENST00000477649 TMEM75Q8N9X5 138 aa6.18□□□□□ -1.42
VMA21-203ENST00000477649 BLNKQ8WV28 456 aa6.18□□□□□ -1.42
VMA21-203ENST00000477649 METTL26Q96S19 204 aa6.18□□□□□ -1.42
VMA21-203ENST00000477649 ZNF586Q9NXT0 402 aa6.18□□□□□ -1.42
VMA21-203ENST00000477649 VPREB3Q9UKI3 123 aa6.18□□□□□ -1.42
VMA21-203ENST00000477649 ZFP30Q9Y2G7 519 aa6.18□□□□□ -1.42
VMA21-203ENST00000477649 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.17□□□□□ -1.42
VMA21-203ENST00000477649 TGIF2-C20orf24A0A0A6YYL0 155 aa6.17□□□□□ -1.42
VMA21-203ENST00000477649 G3V318 75 aa6.17□□□□□ -1.42
VMA21-203ENST00000477649 MRPS12O15235 138 aaKnown RBP6.17□□□□□ -1.42
VMA21-203ENST00000477649 IGLV1-40P01703 118 aa6.17□□□□□ -1.42
VMA21-203ENST00000477649 TRGV3P03979 118 aa6.17□□□□□ -1.42
VMA21-203ENST00000477649 GPR183P32249 361 aa6.17□□□□□ -1.42
VMA21-203ENST00000477649 ADMP35318 185 aa6.17□□□□□ -1.42
VMA21-203ENST00000477649 SCGB2A2Q13296 93 aa6.17□□□□□ -1.42
VMA21-203ENST00000477649 RPEL1Q2QD12 228 aa6.17□□□□□ -1.42
VMA21-203ENST00000477649 DEFB112Q30KQ8 113 aa6.17□□□□□ -1.42
VMA21-203ENST00000477649 C9orf152Q5JTZ5 239 aa6.17□□□□□ -1.42
VMA21-203ENST00000477649 IBA57Q5T440 356 aaKnown RBP6.17□□□□□ -1.42
VMA21-203ENST00000477649 RASL11AQ6T310 242 aa6.17□□□□□ -1.42
VMA21-203ENST00000477649 TOMM20LQ6UXN7 152 aa6.17□□□□□ -1.42
VMA21-203ENST00000477649 Q6YL49 198 aa6.17□□□□□ -1.42
VMA21-203ENST00000477649 OR8I2Q8N0Y5 310 aa6.17□□□□□ -1.42
VMA21-203ENST00000477649 ZNF414Q96IQ9 312 aa6.17□□□□□ -1.42
VMA21-203ENST00000477649 Q96MF0 132 aa6.17□□□□□ -1.42
VMA21-203ENST00000477649 FOXC2Q99958 501 aa6.17□□□□□ -1.42
VMA21-203ENST00000477649 SLC50A1Q9BRV3 221 aa6.17□□□□□ -1.42
VMA21-203ENST00000477649 PRSS22Q9GZN4 317 aa6.17□□□□□ -1.42
VMA21-203ENST00000477649 NPFFR1Q9GZQ6 430 aa6.17□□□□□ -1.42
VMA21-203ENST00000477649 ZNF492Q9P255 531 aa6.17□□□□□ -1.42
VMA21-203ENST00000477649 USP9XQ93008 2570 aaPredicted RBP6.17□□□□□ -1.42
VMA21-203ENST00000477649 NAV3Q8IVL0 2385 aa6.17□□□□□ -1.42
VMA21-203ENST00000477649 A0A1W2PPQ1 181 aa6.16□□□□□ -1.42
VMA21-203ENST00000477649 A0A1W2PS18 150 aa6.16□□□□□ -1.42
VMA21-203ENST00000477649 FAM231BA6NCW3 169 aa6.16□□□□□ -1.42
VMA21-203ENST00000477649 C5orf52A6NGY3 159 aa6.16□□□□□ -1.42
VMA21-203ENST00000477649 K7EN84 100 aa6.16□□□□□ -1.42
VMA21-203ENST00000477649 NDUFA4O00483 81 aa6.16□□□□□ -1.42
VMA21-203ENST00000477649 LTAP01374 205 aa6.16□□□□□ -1.42
VMA21-203ENST00000477649 IGHG4P01861 327 aa6.16□□□□□ -1.42
VMA21-203ENST00000477649 MT-ND6P03923 174 aa6.16□□□□□ -1.42
VMA21-203ENST00000477649 S100A8P05109 93 aa6.16□□□□□ -1.42
VMA21-203ENST00000477649 BMI1P35226 326 aa6.16□□□□□ -1.42
VMA21-203ENST00000477649 TPPP2P59282 170 aa6.16□□□□□ -1.42
VMA21-203ENST00000477649 KRTAP10-9P60411 292 aa6.16□□□□□ -1.42
VMA21-203ENST00000477649 SLC35B1P78383 322 aa6.16□□□□□ -1.42
VMA21-203ENST00000477649 LY6EQ16553 131 aa6.16□□□□□ -1.42
VMA21-203ENST00000477649 SAMD13Q5VXD3 122 aa6.16□□□□□ -1.42
VMA21-203ENST00000477649 WDR73Q6P4I2 378 aa6.16□□□□□ -1.42
VMA21-203ENST00000477649 CLEC19AQ6UXS0 136 aa6.16□□□□□ -1.42
VMA21-203ENST00000477649 SIGLEC15Q6ZMC9 328 aa6.16□□□□□ -1.42
VMA21-203ENST00000477649 TMEM183AQ8IXX5 376 aa6.16□□□□□ -1.42
VMA21-203ENST00000477649 OR4B1Q8NGF8 309 aa6.16□□□□□ -1.42
VMA21-203ENST00000477649 MRPL53Q96EL3 112 aaKnown RBP6.16□□□□□ -1.42
VMA21-203ENST00000477649 GRAMD2BQ96HH9 432 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms