RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 HLA-DRB4P13762 266 aa10.21□□□□□ -0.77
RTFDC1-207ENST00000477573 BCL3P20749 454 aa10.21□□□□□ -0.77
RTFDC1-207ENST00000477573 TMEM116Q8NCL8 245 aa10.21□□□□□ -0.77
RTFDC1-207ENST00000477573 IFI27L2Q9H2X8 130 aa10.21□□□□□ -0.77
RTFDC1-207ENST00000477573 ZNF442Q9H7R0 627 aa10.21□□□□□ -0.77
RTFDC1-207ENST00000477573 HLA-DRB4X5D2U9 266 aa10.21□□□□□ -0.77
RTFDC1-207ENST00000477573 C9JAW5 83 aa10.21□□□□□ -0.78
RTFDC1-207ENST00000477573 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.21□□□□□ -0.78
RTFDC1-207ENST00000477573 MGST3O14880 152 aa10.21□□□□□ -0.78
RTFDC1-207ENST00000477573 CRYGBP07316 175 aa10.21□□□□□ -0.78
RTFDC1-207ENST00000477573 EDDM3BP56851 147 aa10.21□□□□□ -0.78
RTFDC1-207ENST00000477573 C12orf74Q32Q52 190 aa10.21□□□□□ -0.78
RTFDC1-207ENST00000477573 SGK494Q96LW2 274 aa10.21□□□□□ -0.78
RTFDC1-207ENST00000477573 TMEM167BQ9NRX6 74 aa10.21□□□□□ -0.78
RTFDC1-207ENST00000477573 HIGD1AQ9Y241 93 aa10.21□□□□□ -0.78
RTFDC1-207ENST00000477573 ZNF503-AS2A6NEH8 195 aa10.2□□□□□ -0.78
RTFDC1-207ENST00000477573 CAMPP49913 170 aa10.2□□□□□ -0.78
RTFDC1-207ENST00000477573 Q6ZT83 130 aa10.2□□□□□ -0.78
RTFDC1-207ENST00000477573 PCP2Q8IVA1 136 aa10.2□□□□□ -0.78
RTFDC1-207ENST00000477573 ZNF808Q8N4W9 903 aaPredicted RBP10.2□□□□□ -0.78
RTFDC1-207ENST00000477573 AJUBAQ96IF1 538 aa10.2□□□□□ -0.78
RTFDC1-207ENST00000477573 AP5S1Q9NUS5 200 aa10.2□□□□□ -0.78
RTFDC1-207ENST00000477573 CUL9Q8IWT3 2517 aa10.2□□□□□ -0.78
RTFDC1-207ENST00000477573 FAM90A10PA6NDY2 464 aa10.19□□□□□ -0.78
RTFDC1-207ENST00000477573 FAM90A20PA6NIJ5 464 aa10.19□□□□□ -0.78
RTFDC1-207ENST00000477573 FAM90A7PA6NKC0 464 aa10.19□□□□□ -0.78
RTFDC1-207ENST00000477573 FAM90A22PA8MWA6 464 aa10.19□□□□□ -0.78
RTFDC1-207ENST00000477573 FAM90A12PA8MX19 464 aa10.19□□□□□ -0.78
RTFDC1-207ENST00000477573 FAM90A5PA8MXJ8 464 aa10.19□□□□□ -0.78
RTFDC1-207ENST00000477573 FAM90A23PA8MXZ1 464 aa10.19□□□□□ -0.78
RTFDC1-207ENST00000477573 SHISA9B4DS77 424 aa10.19□□□□□ -0.78
RTFDC1-207ENST00000477573 NDUFS7O75251 213 aa10.19□□□□□ -0.78
RTFDC1-207ENST00000477573 NCR2O95944 276 aa10.19□□□□□ -0.78
RTFDC1-207ENST00000477573 FAM90A15PP0C7V4 464 aa10.19□□□□□ -0.78
RTFDC1-207ENST00000477573 FAM90A13PP0C7W8 464 aa10.19□□□□□ -0.78
RTFDC1-207ENST00000477573 FAM90A14PP0C7W9 464 aa10.19□□□□□ -0.78
RTFDC1-207ENST00000477573 FAM90A24PP0C7X0 464 aa10.19□□□□□ -0.78
RTFDC1-207ENST00000477573 PRSS12P56730 875 aa10.19□□□□□ -0.78
RTFDC1-207ENST00000477573 TBC1D28Q2M2D7 210 aa10.19□□□□□ -0.78
RTFDC1-207ENST00000477573 SPRNQ5BIV9 151 aa10.19□□□□□ -0.78
RTFDC1-207ENST00000477573 ZNF474Q6S9Z5 364 aaPredicted RBP10.19□□□□□ -0.78
RTFDC1-207ENST00000477573 RBPMS2Q6ZRY4 209 aaKnown RBP10.19□□□□□ -0.78
RTFDC1-207ENST00000477573 MDP1Q86V88 176 aa10.19□□□□□ -0.78
RTFDC1-207ENST00000477573 CNEP1R1Q8N9A8 125 aa10.19□□□□□ -0.78
RTFDC1-207ENST00000477573 KIR2DL5BQ8NHK3 375 aa10.19□□□□□ -0.78
RTFDC1-207ENST00000477573 SLC25A10Q9UBX3 287 aaPredicted RBP10.19□□□□□ -0.78
RTFDC1-207ENST00000477573 DOCK7Q96N67 2140 aa10.19□□□□□ -0.78
RTFDC1-207ENST00000477573 IGKV1-27A0A075B6S5 117 aa10.19□□□□□ -0.78
RTFDC1-207ENST00000477573 SPRY1O43609 319 aaPredicted RBP10.19□□□□□ -0.78
RTFDC1-207ENST00000477573 NMUP48645 174 aa10.19□□□□□ -0.78
RTFDC1-207ENST00000477573 FOXA3P55318 350 aaPredicted RBP10.19□□□□□ -0.78
RTFDC1-207ENST00000477573 OR1L8Q8NGR8 309 aa10.19□□□□□ -0.78
RTFDC1-207ENST00000477573 F11RQ9Y624 299 aaKnown RBP10.19□□□□□ -0.78
RTFDC1-207ENST00000477573 ASPMQ8IZT6 3477 aa10.18□□□□□ -0.78
RTFDC1-207ENST00000477573 CACNA1GO43497 2377 aa10.18□□□□□ -0.78
RTFDC1-207ENST00000477573 HIGD1CA8MV81 97 aa10.18□□□□□ -0.78
RTFDC1-207ENST00000477573 LYRM7Q5U5X0 104 aa10.18□□□□□ -0.78
RTFDC1-207ENST00000477573 SBSPONQ8IVN8 264 aa10.18□□□□□ -0.78
RTFDC1-207ENST00000477573 PIP4P2Q8N4L2 257 aa10.18□□□□□ -0.78
RTFDC1-207ENST00000477573 ZNRF2Q8NHG8 242 aa10.18□□□□□ -0.78
RTFDC1-207ENST00000477573 TMEM101Q96IK0 257 aa10.18□□□□□ -0.78
RTFDC1-207ENST00000477573 PRADC1Q9BSG0 188 aa10.18□□□□□ -0.78
RTFDC1-207ENST00000477573 TMUB1Q9BVT8 246 aa10.18□□□□□ -0.78
RTFDC1-207ENST00000477573 SPANXDQ9BXN6 97 aa10.18□□□□□ -0.78
RTFDC1-207ENST00000477573 OBP2BQ9NPH6 170 aa10.18□□□□□ -0.78
RTFDC1-207ENST00000477573 ZFHX4Q86UP3 3567 aa10.18□□□□□ -0.78
RTFDC1-207ENST00000477573 TRAV4A0A0B4J268 109 aa10.18□□□□□ -0.78
RTFDC1-207ENST00000477573 ORM2P19652 201 aa10.18□□□□□ -0.78
RTFDC1-207ENST00000477573 IGHV1-2P23083 117 aa10.18□□□□□ -0.78
RTFDC1-207ENST00000477573 EFNB3Q15768 340 aa10.18□□□□□ -0.78
RTFDC1-207ENST00000477573 PIGYQ3MUY2 71 aa10.18□□□□□ -0.78
RTFDC1-207ENST00000477573 Q6ZR03 302 aa10.18□□□□□ -0.78
RTFDC1-207ENST00000477573 RPRMLQ8N4K4 120 aa10.18□□□□□ -0.78
RTFDC1-207ENST00000477573 OR13A1Q8NGR1 328 aa10.18□□□□□ -0.78
RTFDC1-207ENST00000477573 FAM168AQ92567 244 aa10.18□□□□□ -0.78
RTFDC1-207ENST00000477573 SNRNP40Q96DI7 357 aaKnown RBP10.18□□□□□ -0.78
RTFDC1-207ENST00000477573 LOC400499M0QZD8 3231 aa10.18□□□□□ -0.78
RTFDC1-207ENST00000477573 NGFP01138 241 aa10.17□□□□□ -0.78
RTFDC1-207ENST00000477573 RBM11P57052 281 aaKnown RBP10.17□□□□□ -0.78
RTFDC1-207ENST00000477573 C9orf106Q8NAJ2 232 aa10.17□□□□□ -0.78
RTFDC1-207ENST00000477573 ZNF355PQ9NSJ1 428 aa10.17□□□□□ -0.78
RTFDC1-207ENST00000477573 NPFFO15130 113 aa10.16□□□□□ -0.78
RTFDC1-207ENST00000477573 SCTP09683 121 aa10.16□□□□□ -0.78
RTFDC1-207ENST00000477573 GATA4P43694 442 aa10.16□□□□□ -0.78
RTFDC1-207ENST00000477573 TNFAIP6P98066 277 aaPredicted RBP10.16□□□□□ -0.78
RTFDC1-207ENST00000477573 TMEM219Q86XT9 240 aa10.16□□□□□ -0.78
RTFDC1-207ENST00000477573 FAM234AQ9H0X4 552 aa10.16□□□□□ -0.78
RTFDC1-207ENST00000477573 PRRG2O14669 202 aa10.16□□□□□ -0.78
RTFDC1-207ENST00000477573 LYZL6O75951 148 aa10.16□□□□□ -0.78
RTFDC1-207ENST00000477573 FOXC1Q12948 553 aa10.16□□□□□ -0.78
RTFDC1-207ENST00000477573 MRPL23Q16540 153 aaKnown RBP10.16□□□□□ -0.78
RTFDC1-207ENST00000477573 MKXQ8IYA7 352 aa10.16□□□□□ -0.78
RTFDC1-207ENST00000477573 TCF19Q9Y242 345 aa10.16□□□□□ -0.78
RTFDC1-207ENST00000477573 C16orf97H3BN30 126 aa10.15□□□□□ -0.78
RTFDC1-207ENST00000477573 TMEM158Q8WZ71 300 aa10.15□□□□□ -0.78
RTFDC1-207ENST00000477573 RND1Q92730 232 aa10.15□□□□□ -0.78
RTFDC1-207ENST00000477573 COQ2Q96H96 371 aa10.15□□□□□ -0.78
RTFDC1-207ENST00000477573 PROCRQ9UNN8 238 aa10.15□□□□□ -0.78
RTFDC1-207ENST00000477573 TRBV25-1A0A075B6N4 114 aa10.15□□□□□ -0.79
RTFDC1-207ENST00000477573 IGKV1-12A0A0C4DH73 117 aa10.15□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms