RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 FAM159AQ6UWV7 190 aa11.74□□□□□ -0.53
HDAC6-220ENST00000477528 ODF3L1Q8IXM7 274 aa11.74□□□□□ -0.53
HDAC6-220ENST00000477528 TSPOP30536 169 aa11.74□□□□□ -0.53
HDAC6-220ENST00000477528 TEX29Q8N6K0 151 aa11.74□□□□□ -0.53
HDAC6-220ENST00000477528 IGKV2-40A0A087WW87 121 aaPredicted RBP11.74□□□□□ -0.53
HDAC6-220ENST00000477528 IGKV2D-40P01614 121 aaPredicted RBP11.74□□□□□ -0.53
HDAC6-220ENST00000477528 PAX8Q06710 450 aa11.74□□□□□ -0.53
HDAC6-220ENST00000477528 PLCE1Q9P212 2302 aa11.73□□□□□ -0.53
HDAC6-220ENST00000477528 NPFFO15130 113 aa11.73□□□□□ -0.53
HDAC6-220ENST00000477528 GNLYP22749 145 aa11.73□□□□□ -0.53
HDAC6-220ENST00000477528 PDE6HQ13956 83 aa11.73□□□□□ -0.53
HDAC6-220ENST00000477528 ZNF492Q9P255 531 aa11.73□□□□□ -0.53
HDAC6-220ENST00000477528 FAM231DQ6ZW35 169 aa11.73□□□□□ -0.53
HDAC6-220ENST00000477528 CENPFP49454 3210 aa11.73□□□□□ -0.53
HDAC6-220ENST00000477528 GFRA4Q9GZZ7 299 aa11.73□□□□□ -0.53
HDAC6-220ENST00000477528 FNDC4Q9H6D8 234 aaPredicted RBP11.73□□□□□ -0.53
HDAC6-220ENST00000477528 WDR87Q6ZQQ6 2873 aa11.73□□□□□ -0.53
HDAC6-220ENST00000477528 NPIPB5A8MRT5 1133 aa11.72□□□□□ -0.53
HDAC6-220ENST00000477528 M0R381 172 aa11.72□□□□□ -0.53
HDAC6-220ENST00000477528 ZNF664Q8N3J9 261 aa11.72□□□□□ -0.53
HDAC6-220ENST00000477528 PYGO2Q9BRQ0 406 aa11.72□□□□□ -0.53
HDAC6-220ENST00000477528 PPBPP02775 128 aa11.72□□□□□ -0.53
HDAC6-220ENST00000477528 AKAP6Q13023 2319 aa11.72□□□□□ -0.53
HDAC6-220ENST00000477528 SAMD13Q5VXD3 122 aa11.72□□□□□ -0.53
HDAC6-220ENST00000477528 C18orf15Q96N68 181 aa11.72□□□□□ -0.53
HDAC6-220ENST00000477528 BPESC1Q9GZL8 116 aa11.72□□□□□ -0.53
HDAC6-220ENST00000477528 LAMTOR2Q9Y2Q5 125 aa11.72□□□□□ -0.53
HDAC6-220ENST00000477528 FAM181BA6NEQ2 426 aa11.72□□□□□ -0.53
HDAC6-220ENST00000477528 MED12LQ86YW9 2145 aa11.72□□□□□ -0.53
HDAC6-220ENST00000477528 PRB4P10163 310 aaPredicted RBP11.71□□□□□ -0.53
HDAC6-220ENST00000477528 CT83Q5H943 113 aa11.71□□□□□ -0.53
HDAC6-220ENST00000477528 DGAT2L7PQ6IED9 249 aa11.71□□□□□ -0.53
HDAC6-220ENST00000477528 F2Z2F3 143 aa11.71□□□□□ -0.53
HDAC6-220ENST00000477528 UQCRFS1P47985 274 aa11.71□□□□□ -0.53
HDAC6-220ENST00000477528 ST6GALNAC6Q969X2 333 aa11.71□□□□□ -0.53
HDAC6-220ENST00000477528 FXYD5Q96DB9 178 aa11.71□□□□□ -0.53
HDAC6-220ENST00000477528 IGLC7A0M8Q6 106 aa11.71□□□□□ -0.54
HDAC6-220ENST00000477528 SAA4P35542 130 aa11.71□□□□□ -0.54
HDAC6-220ENST00000477528 UNQ6494/PRO21346Q6UXR6 183 aa11.71□□□□□ -0.54
HDAC6-220ENST00000477528 TMEM219Q86XT9 240 aa11.71□□□□□ -0.54
HDAC6-220ENST00000477528 ZNF295-AS1Q8N0V1 137 aa11.71□□□□□ -0.54
HDAC6-220ENST00000477528 OTOGLQ3ZCN5 2332 aa11.71□□□□□ -0.54
HDAC6-220ENST00000477528 TRBV7-1A0A0A6YYK4 115 aa11.71□□□□□ -0.54
HDAC6-220ENST00000477528 A0A1B0GUS0 222 aa11.71□□□□□ -0.54
HDAC6-220ENST00000477528 C7orf71A4D174 169 aa11.71□□□□□ -0.54
HDAC6-220ENST00000477528 ATP5LO75964 103 aa11.71□□□□□ -0.54
HDAC6-220ENST00000477528 IGHV2-70P01814 119 aa11.71□□□□□ -0.54
HDAC6-220ENST00000477528 UBE2E1P51965 193 aa11.71□□□□□ -0.54
HDAC6-220ENST00000477528 SRSF9Q13242 221 aaKnown RBP eCLIP11.71□□□□□ -0.54
HDAC6-220ENST00000477528 LINC00527Q9UJ94 153 aa11.71□□□□□ -0.54
HDAC6-220ENST00000477528 M0R3E3 92 aa11.7□□□□□ -0.54
HDAC6-220ENST00000477528 TMEM14CQ9P0S9 112 aa11.7□□□□□ -0.54
HDAC6-220ENST00000477528 FAM231BA6NCW3 169 aa11.7□□□□□ -0.54
HDAC6-220ENST00000477528 PPP1R17O96001 155 aa11.7□□□□□ -0.54
HDAC6-220ENST00000477528 TGFAP01135 160 aa11.7□□□□□ -0.54
HDAC6-220ENST00000477528 C3orf79P0CE67 100 aa11.7□□□□□ -0.54
HDAC6-220ENST00000477528 Q1RN00 199 aa11.7□□□□□ -0.54
HDAC6-220ENST00000477528 SIGLEC15Q6ZMC9 328 aa11.7□□□□□ -0.54
HDAC6-220ENST00000477528 SH2D7A6NKC9 451 aaPredicted RBP11.7□□□□□ -0.54
HDAC6-220ENST00000477528 HBDP02042 147 aa11.7□□□□□ -0.54
HDAC6-220ENST00000477528 PAX1P15863 534 aa11.7□□□□□ -0.54
HDAC6-220ENST00000477528 PSMG4Q5JS54 123 aa11.7□□□□□ -0.54
HDAC6-220ENST00000477528 TRBV19A0A075B6N1 114 aa11.7□□□□□ -0.54
HDAC6-220ENST00000477528 SMIM27A0A1W2PRY6 76 aa11.7□□□□□ -0.54
HDAC6-220ENST00000477528 IGLC1P0CG04 106 aa11.7□□□□□ -0.54
HDAC6-220ENST00000477528 CD33P20138 364 aa11.7□□□□□ -0.54
HDAC6-220ENST00000477528 TDGF1P3P51864 188 aa11.7□□□□□ -0.54
HDAC6-220ENST00000477528 LYRM7Q5U5X0 104 aa11.7□□□□□ -0.54
HDAC6-220ENST00000477528 KLK15Q9H2R5 256 aa11.7□□□□□ -0.54
HDAC6-220ENST00000477528 K7EN84 100 aa11.69□□□□□ -0.54
HDAC6-220ENST00000477528 BRWD1-AS2P59051 145 aa11.69□□□□□ -0.54
HDAC6-220ENST00000477528 LYZL1Q6UWQ5 148 aa11.69□□□□□ -0.54
HDAC6-220ENST00000477528 TMEM75Q8N9X5 138 aa11.69□□□□□ -0.54
HDAC6-220ENST00000477528 ABCA1O95477 2261 aa11.69□□□□□ -0.54
HDAC6-220ENST00000477528 A1L4Q6 167 aa11.69□□□□□ -0.54
HDAC6-220ENST00000477528 SCGB1C2P0DMR2 95 aa11.69□□□□□ -0.54
HDAC6-220ENST00000477528 SSBP2P81877 361 aaPredicted RBP11.69□□□□□ -0.54
HDAC6-220ENST00000477528 PCNTO95613 3336 aa11.69□□□□□ -0.54
HDAC6-220ENST00000477528 SH2D1AO60880 128 aa11.69□□□□□ -0.54
HDAC6-220ENST00000477528 RNF224P0DH78 156 aa11.69□□□□□ -0.54
HDAC6-220ENST00000477528 LINC00469Q8N7U9 141 aa11.69□□□□□ -0.54
HDAC6-220ENST00000477528 ZNF502Q8TBZ5 544 aa11.69□□□□□ -0.54
HDAC6-220ENST00000477528 NXT2Q9NPJ8 142 aaKnown RBP11.69□□□□□ -0.54
HDAC6-220ENST00000477528 LCN12Q6JVE5 192 aa11.68□□□□□ -0.54
HDAC6-220ENST00000477528 KIR2DL4Q99706 377 aa11.68□□□□□ -0.54
HDAC6-220ENST00000477528 NPFFR1Q9GZQ6 430 aa11.68□□□□□ -0.54
HDAC6-220ENST00000477528 TRAV21A0A0B4J279 112 aa11.68□□□□□ -0.54
HDAC6-220ENST00000477528 C22orf46C9J442 243 aa11.68□□□□□ -0.54
HDAC6-220ENST00000477528 PROP1O75360 226 aa11.68□□□□□ -0.54
HDAC6-220ENST00000477528 NDUFB8O95169 186 aa11.68□□□□□ -0.54
HDAC6-220ENST00000477528 CGB3P0DN86 165 aa11.68□□□□□ -0.54
HDAC6-220ENST00000477528 CGB7P0DN87 165 aa11.68□□□□□ -0.54
HDAC6-220ENST00000477528 PRR31Q5SQ13 230 aa11.68□□□□□ -0.54
HDAC6-220ENST00000477528 FAM110DQ8TAY7 271 aaPredicted RBP11.68□□□□□ -0.54
HDAC6-220ENST00000477528 DSCR9P59020 149 aa11.68□□□□□ -0.54
HDAC6-220ENST00000477528 OVOL1O14753 267 aa11.67□□□□□ -0.54
HDAC6-220ENST00000477528 RNASE4P34096 147 aaKnown RBP11.67□□□□□ -0.54
HDAC6-220ENST00000477528 CACNG7P62955 275 aa11.67□□□□□ -0.54
HDAC6-220ENST00000477528 CPAMD8Q8IZJ3 1885 aa11.67□□□□□ -0.54
HDAC6-220ENST00000477528 GCSHP23434 173 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms