RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 SLC35B1P78383 322 aa11.1□□□□□ -0.63
COL4A6-206ENST00000477085 RELQ04864 619 aaPredicted RBP11.1□□□□□ -0.63
COL4A6-206ENST00000477085 HIST2H2BDQ6DRA6 164 aa11.1□□□□□ -0.63
COL4A6-206ENST00000477085 BLNKQ8WV28 456 aa11.1□□□□□ -0.63
COL4A6-206ENST00000477085 RPUSD4Q96CM3 377 aaKnown RBP11.1□□□□□ -0.63
COL4A6-206ENST00000477085 DERL1Q9BUN8 251 aa11.1□□□□□ -0.63
COL4A6-206ENST00000477085 ARL2-SNX15V9GYD0 113 aa11.1□□□□□ -0.63
COL4A6-206ENST00000477085 SETXQ7Z333 2677 aaKnown RBP11.1□□□□□ -0.63
COL4A6-206ENST00000477085 BAHCC1Q9P281 2608 aa11.09□□□□□ -0.63
COL4A6-206ENST00000477085 PDE6DO43924 150 aa11.09□□□□□ -0.63
COL4A6-206ENST00000477085 NDUFB4O95168 129 aa11.09□□□□□ -0.63
COL4A6-206ENST00000477085 SNAPINO95295 136 aa11.09□□□□□ -0.63
COL4A6-206ENST00000477085 IGLC2P0DOY2 106 aa11.09□□□□□ -0.63
COL4A6-206ENST00000477085 SUMO1P63165 101 aaKnown RBP11.09□□□□□ -0.63
COL4A6-206ENST00000477085 FAM74A3Q4VXF1 159 aa11.09□□□□□ -0.63
COL4A6-206ENST00000477085 KLHDC1Q8N7A1 406 aa11.09□□□□□ -0.63
COL4A6-206ENST00000477085 CLRN3Q8NCR9 226 aa11.09□□□□□ -0.63
COL4A6-206ENST00000477085 C20orf24Q9BUV8 137 aa11.09□□□□□ -0.63
COL4A6-206ENST00000477085 ELOVL1Q9BW60 279 aa11.09□□□□□ -0.63
COL4A6-206ENST00000477085 PARLQ9H300 379 aa11.09□□□□□ -0.63
COL4A6-206ENST00000477085 PEF1Q9UBV8 284 aaKnown RBP11.09□□□□□ -0.63
COL4A6-206ENST00000477085 SMAD5-AS1Q9Y6J3 95 aa11.09□□□□□ -0.63
COL4A6-206ENST00000477085 RANP62826 216 aaKnown RBP11.08□□□□□ -0.64
COL4A6-206ENST00000477085 SCGB2A2Q13296 93 aa11.08□□□□□ -0.64
COL4A6-206ENST00000477085 C18orf65Q6ZTR6 163 aa11.08□□□□□ -0.64
COL4A6-206ENST00000477085 ZNF418Q8TF45 676 aaPredicted RBP11.08□□□□□ -0.64
COL4A6-206ENST00000477085 WIPF2Q8TF74 440 aaPredicted RBP11.08□□□□□ -0.64
COL4A6-206ENST00000477085 TXNDC17Q9BRA2 123 aa11.08□□□□□ -0.64
COL4A6-206ENST00000477085 U3KQE9 123 aa11.08□□□□□ -0.64
COL4A6-206ENST00000477085 IGHV3-49A0A0A0MS15 119 aa11.08□□□□□ -0.64
COL4A6-206ENST00000477085 IGHV3-66A0A0C4DH42 116 aa11.08□□□□□ -0.64
COL4A6-206ENST00000477085 BUB3O43684 328 aa11.08□□□□□ -0.64
COL4A6-206ENST00000477085 HIST1H1EP10412 219 aaKnown RBP11.08□□□□□ -0.64
COL4A6-206ENST00000477085 ZNF674Q2M3X9 581 aa11.08□□□□□ -0.64
COL4A6-206ENST00000477085 BPIFA4PQ86YQ2 179 aa11.08□□□□□ -0.64
COL4A6-206ENST00000477085 NSD1Q96L73 2696 aaPredicted RBP11.08□□□□□ -0.64
COL4A6-206ENST00000477085 IGHV3OR16-13A0A075B7E8 117 aa11.07□□□□□ -0.64
COL4A6-206ENST00000477085 IGHV3-74A0A0B4J1X5 117 aa11.07□□□□□ -0.64
COL4A6-206ENST00000477085 ZNF727A8MUV8 499 aa11.07□□□□□ -0.64
COL4A6-206ENST00000477085 F6UZH7 168 aa11.07□□□□□ -0.64
COL4A6-206ENST00000477085 NDUFA4O00483 81 aa11.07□□□□□ -0.64
COL4A6-206ENST00000477085 CRYBB3P26998 211 aa11.07□□□□□ -0.64
COL4A6-206ENST00000477085 C11orf52Q96A22 123 aa11.07□□□□□ -0.64
COL4A6-206ENST00000477085 TRBV20OR9-2A0A075B6H5 130 aa11.06□□□□□ -0.64
COL4A6-206ENST00000477085 TRBV19A0A075B6N1 114 aa11.06□□□□□ -0.64
COL4A6-206ENST00000477085 GGCTO75223 188 aaKnown RBP11.06□□□□□ -0.64
COL4A6-206ENST00000477085 AKR1C3P42330 323 aa11.06□□□□□ -0.64
COL4A6-206ENST00000477085 SRSF2Q01130 221 aaKnown RBP11.06□□□□□ -0.64
COL4A6-206ENST00000477085 AWAT1Q58HT5 328 aa11.06□□□□□ -0.64
COL4A6-206ENST00000477085 UBE2E2Q96LR5 201 aa11.06□□□□□ -0.64
COL4A6-206ENST00000477085 SMIM7Q9BQ49 75 aa11.06□□□□□ -0.64
COL4A6-206ENST00000477085 PGPA6NDG6 321 aa11.05□□□□□ -0.64
COL4A6-206ENST00000477085 SLC17A3O00476 420 aa11.05□□□□□ -0.64
COL4A6-206ENST00000477085 TSPAN4O14817 238 aa11.05□□□□□ -0.64
COL4A6-206ENST00000477085 FAM209BQ5JX69 171 aa11.05□□□□□ -0.64
COL4A6-206ENST00000477085 LINC01006Q8NI28 216 aa11.05□□□□□ -0.64
COL4A6-206ENST00000477085 NIPSNAP3BQ9BS92 247 aa11.05□□□□□ -0.64
COL4A6-206ENST00000477085 C16orf95Q9H693 158 aa11.05□□□□□ -0.64
COL4A6-206ENST00000477085 SDF2L1Q9HCN8 221 aa11.05□□□□□ -0.64
COL4A6-206ENST00000477085 FN1P02751 2386 aaKnown RBP11.05□□□□□ -0.64
COL4A6-206ENST00000477085 LGALS1P09382 135 aaKnown RBP11.05□□□□□ -0.64
COL4A6-206ENST00000477085 EDN2P20800 178 aa11.05□□□□□ -0.64
COL4A6-206ENST00000477085 GNG5P63218 68 aa11.05□□□□□ -0.64
COL4A6-206ENST00000477085 OR8I2Q8N0Y5 310 aa11.05□□□□□ -0.64
COL4A6-206ENST00000477085 EXOC3-AS1Q8N2X6 119 aa11.05□□□□□ -0.64
COL4A6-206ENST00000477085 C2CD4CQ8TF44 421 aa11.05□□□□□ -0.64
COL4A6-206ENST00000477085 TMEM190Q8WZ59 177 aa11.05□□□□□ -0.64
COL4A6-206ENST00000477085 LINC00479Q96M42 142 aa11.05□□□□□ -0.64
COL4A6-206ENST00000477085 METTL26Q96S19 204 aa11.05□□□□□ -0.64
COL4A6-206ENST00000477085 Q9H3A6 140 aa11.05□□□□□ -0.64
COL4A6-206ENST00000477085 C7orf77A4D0Y5 90 aa11.04□□□□□ -0.64
COL4A6-206ENST00000477085 M0R036 132 aa11.04□□□□□ -0.64
COL4A6-206ENST00000477085 CRYBA1P05813 215 aa11.04□□□□□ -0.64
COL4A6-206ENST00000477085 SIGLEC15Q6ZMC9 328 aa11.04□□□□□ -0.64
COL4A6-206ENST00000477085 S100A7AQ86SG5 101 aa11.04□□□□□ -0.64
COL4A6-206ENST00000477085 OR4F17Q8NGA8 305 aa11.04□□□□□ -0.64
COL4A6-206ENST00000477085 TVP23CQ96ET8 276 aa11.04□□□□□ -0.64
COL4A6-206ENST00000477085 IGHV4OR15-8A0A075B7B6 117 aa11.03□□□□□ -0.64
COL4A6-206ENST00000477085 A0A087WW49 117 aa11.03□□□□□ -0.64
COL4A6-206ENST00000477085 ZNF320A2RRD8 509 aa11.03□□□□□ -0.64
COL4A6-206ENST00000477085 PGPEP1LA6NFU8 196 aa11.03□□□□□ -0.64
COL4A6-206ENST00000477085 PRB4P10163 310 aaPredicted RBP11.03□□□□□ -0.64
COL4A6-206ENST00000477085 RPL35P42766 123 aaKnown RBP11.03□□□□□ -0.64
COL4A6-206ENST00000477085 TMEM241Q24JQ0 296 aa11.03□□□□□ -0.64
COL4A6-206ENST00000477085 TM4SF20Q53R12 229 aa11.03□□□□□ -0.64
COL4A6-206ENST00000477085 TMEM88Q6PEY1 159 aa11.03□□□□□ -0.64
COL4A6-206ENST00000477085 GPHB5Q86YW7 130 aa11.03□□□□□ -0.64
COL4A6-206ENST00000477085 CBLN2Q8IUK8 224 aa11.03□□□□□ -0.64
COL4A6-206ENST00000477085 CRLF1O75462 422 aa11.03□□□□□ -0.64
COL4A6-206ENST00000477085 RPL7P18124 248 aaKnown RBP11.03□□□□□ -0.64
COL4A6-206ENST00000477085 CDX1P47902 265 aaPredicted RBP11.03□□□□□ -0.64
COL4A6-206ENST00000477085 RPL23P62829 140 aaKnown RBP11.03□□□□□ -0.64
COL4A6-206ENST00000477085 AURKAIP1Q9NWT8 199 aaPredicted RBP11.03□□□□□ -0.64
COL4A6-206ENST00000477085 NAT8Q9UHE5 227 aa11.03□□□□□ -0.64
COL4A6-206ENST00000477085 EPDR1Q9UM22 224 aa11.03□□□□□ -0.64
COL4A6-206ENST00000477085 LOC105371267A0A1B0GV96 52 aa11.02□□□□□ -0.65
COL4A6-206ENST00000477085 DEFB136Q30KP8 78 aa11.02□□□□□ -0.65
COL4A6-206ENST00000477085 C1orf194Q5T5A4 169 aa11.02□□□□□ -0.65
COL4A6-206ENST00000477085 C16orf54Q6UWD8 224 aa11.02□□□□□ -0.65
COL4A6-206ENST00000477085 RPS10P5Q9NQ39 176 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms