RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 TRAV8-1A0A0A6YYK1 113 aa13.11□□□□□ -0.31
TVP23B-202ENST00000476139 TRBV9A0A0B4J1U6 114 aa13.11□□□□□ -0.31
TVP23B-202ENST00000476139 VWC2LB2RUY7 222 aa13.11□□□□□ -0.31
TVP23B-202ENST00000476139 IGHV3-23P01764 117 aa13.11□□□□□ -0.31
TVP23B-202ENST00000476139 RPL19P84098 196 aaKnown RBP13.11□□□□□ -0.31
TVP23B-202ENST00000476139 TMEM183BQ1AE95 376 aa13.11□□□□□ -0.31
TVP23B-202ENST00000476139 FAM120AOSQ5T036 256 aa13.11□□□□□ -0.31
TVP23B-202ENST00000476139 SRSF8Q9BRL6 282 aaKnown RBP13.11□□□□□ -0.31
TVP23B-202ENST00000476139 CACNA1AO00555 2505 aa13.1□□□□□ -0.31
TVP23B-202ENST00000476139 KIR2DL5BA0A0G2JN68 375 aa13.1□□□□□ -0.31
TVP23B-202ENST00000476139 KIR2DL5BA0A0G2JPC4 375 aa13.1□□□□□ -0.31
TVP23B-202ENST00000476139 HIGD1CA8MV81 97 aa13.1□□□□□ -0.31
TVP23B-202ENST00000476139 KIR2DL5AQ8N109 375 aa13.1□□□□□ -0.31
TVP23B-202ENST00000476139 NEU1Q99519 415 aa13.1□□□□□ -0.31
TVP23B-202ENST00000476139 ESDP10768 282 aa13.1□□□□□ -0.31
TVP23B-202ENST00000476139 BATFQ16520 125 aa13.1□□□□□ -0.31
TVP23B-202ENST00000476139 ATOH7Q8N100 152 aa13.1□□□□□ -0.31
TVP23B-202ENST00000476139 MT-ND6P03923 174 aa13.09□□□□□ -0.31
TVP23B-202ENST00000476139 CCDC144NLQ6NUI1 221 aa13.09□□□□□ -0.31
TVP23B-202ENST00000476139 ZNF491Q8N8L2 437 aa13.09□□□□□ -0.31
TVP23B-202ENST00000476139 ARPC1AQ92747 370 aa13.09□□□□□ -0.31
TVP23B-202ENST00000476139 VAMP8Q9BV40 100 aa13.09□□□□□ -0.31
TVP23B-202ENST00000476139 SPG11Q96JI7 2443 aa13.09□□□□□ -0.31
TVP23B-202ENST00000476139 IGSF10Q6WRI0 2623 aa13.09□□□□□ -0.31
TVP23B-202ENST00000476139 DIRC3C9JPN6 131 aa13.09□□□□□ -0.31
TVP23B-202ENST00000476139 HLA-DQA1P01909 254 aa13.09□□□□□ -0.31
TVP23B-202ENST00000476139 IL4P05112 153 aa13.09□□□□□ -0.31
TVP23B-202ENST00000476139 G0S2P27469 103 aa13.09□□□□□ -0.31
TVP23B-202ENST00000476139 LMO4P61968 165 aa13.09□□□□□ -0.31
TVP23B-202ENST00000476139 Q8N6K4 173 aa13.09□□□□□ -0.31
TVP23B-202ENST00000476139 OR2D3Q8NGH3 330 aa13.09□□□□□ -0.31
TVP23B-202ENST00000476139 C7orf69Q9H7B7 122 aa13.09□□□□□ -0.31
TVP23B-202ENST00000476139 TMEM11P17152 192 aa13.08□□□□□ -0.31
TVP23B-202ENST00000476139 AJUBAQ96IF1 538 aa13.08□□□□□ -0.31
TVP23B-202ENST00000476139 KLF12Q9Y4X4 402 aa13.08□□□□□ -0.31
TVP23B-202ENST00000476139 TCRAP04437 139 aa13.08□□□□□ -0.32
TVP23B-202ENST00000476139 TSKUQ8WUA8 353 aa13.08□□□□□ -0.32
TVP23B-202ENST00000476139 IGLV11-55A0A075B6I3 123 aa13.08□□□□□ -0.32
TVP23B-202ENST00000476139 IGHV2-70DA0A0C4DH43 119 aa13.08□□□□□ -0.32
TVP23B-202ENST00000476139 TEX43Q6ZNM6 134 aa13.08□□□□□ -0.32
TVP23B-202ENST00000476139 C5orf17Q8NAS9 161 aa13.08□□□□□ -0.32
TVP23B-202ENST00000476139 MBD6Q96DN6 1003 aa13.08□□□□□ -0.32
TVP23B-202ENST00000476139 KCNS1Q96KK3 526 aa13.08□□□□□ -0.32
TVP23B-202ENST00000476139 M0R143 59 aa13.07□□□□□ -0.32
TVP23B-202ENST00000476139 GNG7O60262 68 aa13.07□□□□□ -0.32
TVP23B-202ENST00000476139 EGR2P11161 476 aaPredicted RBP13.07□□□□□ -0.32
TVP23B-202ENST00000476139 GRAMD2BQ96HH9 432 aa13.07□□□□□ -0.32
TVP23B-202ENST00000476139 GPR82Q96P67 336 aa13.07□□□□□ -0.32
TVP23B-202ENST00000476139 F8W735 103 aaPredicted RBP13.07□□□□□ -0.32
TVP23B-202ENST00000476139 FCGR2BP31994 310 aaPredicted RBP13.07□□□□□ -0.32
TVP23B-202ENST00000476139 MINOS1Q5TGZ0 78 aa13.07□□□□□ -0.32
TVP23B-202ENST00000476139 LCN12Q6JVE5 192 aa13.07□□□□□ -0.32
TVP23B-202ENST00000476139 C18orf32Q8TCD1 76 aa13.07□□□□□ -0.32
TVP23B-202ENST00000476139 RNF125Q96EQ8 232 aa13.07□□□□□ -0.32
TVP23B-202ENST00000476139 MLST8Q9BVC4 326 aa13.07□□□□□ -0.32
TVP23B-202ENST00000476139 MINOS1-NBL1R4GNA1 71 aa13.07□□□□□ -0.32
TVP23B-202ENST00000476139 M0QZ24 198 aa13.06□□□□□ -0.32
TVP23B-202ENST00000476139 TCAPO15273 167 aa13.06□□□□□ -0.32
TVP23B-202ENST00000476139 ZNF324O75467 553 aaPredicted RBP13.06□□□□□ -0.32
TVP23B-202ENST00000476139 OR10J3Q5JRS4 329 aa13.06□□□□□ -0.32
TVP23B-202ENST00000476139 Q8N976 141 aa13.06□□□□□ -0.32
TVP23B-202ENST00000476139 IGHV7-81A0A0B4J1V7 117 aa13.06□□□□□ -0.32
TVP23B-202ENST00000476139 OR2J3O76001 311 aa13.06□□□□□ -0.32
TVP23B-202ENST00000476139 HIST1H1EP10412 219 aaKnown RBP13.06□□□□□ -0.32
TVP23B-202ENST00000476139 SAA4P35542 130 aa13.06□□□□□ -0.32
TVP23B-202ENST00000476139 FOXA3P55318 350 aaPredicted RBP13.06□□□□□ -0.32
TVP23B-202ENST00000476139 NUTF2P61970 127 aaKnown RBP13.06□□□□□ -0.32
TVP23B-202ENST00000476139 EBI3Q14213 229 aa13.06□□□□□ -0.32
TVP23B-202ENST00000476139 FAM231DQ6ZW35 169 aa13.06□□□□□ -0.32
TVP23B-202ENST00000476139 PGLYRP4Q96LB8 373 aa13.06□□□□□ -0.32
TVP23B-202ENST00000476139 NDUFB8O95169 186 aa13.05□□□□□ -0.32
TVP23B-202ENST00000476139 NIT1Q86X76 327 aa13.05□□□□□ -0.32
TVP23B-202ENST00000476139 TTC9CQ8N5M4 171 aa13.05□□□□□ -0.32
TVP23B-202ENST00000476139 Q8N9W7 124 aa13.05□□□□□ -0.32
TVP23B-202ENST00000476139 SHANK2-AS3Q9BTD1 123 aa13.05□□□□□ -0.32
TVP23B-202ENST00000476139 SH2D7A6NKC9 451 aaPredicted RBP13.05□□□□□ -0.32
TVP23B-202ENST00000476139 NPIPB5A8MRT5 1133 aa13.05□□□□□ -0.32
TVP23B-202ENST00000476139 TOMM40O96008 361 aa13.05□□□□□ -0.32
TVP23B-202ENST00000476139 C3orf79P0CE67 100 aa13.05□□□□□ -0.32
TVP23B-202ENST00000476139 MAJINQ3KP22 176 aa13.05□□□□□ -0.32
TVP23B-202ENST00000476139 CIARTQ8N365 385 aaPredicted RBP13.05□□□□□ -0.32
TVP23B-202ENST00000476139 PIP4P2Q8N4L2 257 aa13.05□□□□□ -0.32
TVP23B-202ENST00000476139 TMEM14CQ9P0S9 112 aa13.05□□□□□ -0.32
TVP23B-202ENST00000476139 LTAP01374 205 aa13.05□□□□□ -0.32
TVP23B-202ENST00000476139 UBE2E1P51965 193 aa13.05□□□□□ -0.32
TVP23B-202ENST00000476139 PMCHL1Q16048 86 aa13.05□□□□□ -0.32
TVP23B-202ENST00000476139 Q56UQ5 140 aa13.05□□□□□ -0.32
TVP23B-202ENST00000476139 GOLT1AQ6ZVE7 132 aa13.05□□□□□ -0.32
TVP23B-202ENST00000476139 OR2T8A6NH00 312 aa13.04□□□□□ -0.32
TVP23B-202ENST00000476139 ACACBO00763 2458 aa13.04□□□□□ -0.32
TVP23B-202ENST00000476139 IGHV4-39P01824 125 aa13.04□□□□□ -0.32
TVP23B-202ENST00000476139 SSTP61278 116 aa13.04□□□□□ -0.32
TVP23B-202ENST00000476139 LBHQ53QV2 105 aaPredicted RBP13.04□□□□□ -0.32
TVP23B-202ENST00000476139 RNASEKQ6P5S7 137 aaKnown RBP13.04□□□□□ -0.32
TVP23B-202ENST00000476139 IGHV3OR16-8A0A075B7F1 116 aa13.04□□□□□ -0.32
TVP23B-202ENST00000476139 IGHV3-35A0A0C4DH35 117 aa13.04□□□□□ -0.32
TVP23B-202ENST00000476139 OOSP1A8MZH6 123 aa13.04□□□□□ -0.32
TVP23B-202ENST00000476139 H3BRN7 92 aa13.04□□□□□ -0.32
TVP23B-202ENST00000476139 OVOL3O00110 214 aa13.04□□□□□ -0.32
TVP23B-202ENST00000476139 FAM106CPP0CH98 169 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms