RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 C2orf82Q6UX34 121 aa0.61□□□□□ -2.31
LTN1-204ENST00000475344 NPCDR1Q9BY65 106 aa0.61□□□□□ -2.31
LTN1-204ENST00000475344 PCTPQ9UKL6 214 aa0.61□□□□□ -2.31
LTN1-204ENST00000475344 PRNDQ9UKY0 176 aa0.61□□□□□ -2.31
LTN1-204ENST00000475344 APCP25054 2843 aa0.6□□□□□ -2.31
LTN1-204ENST00000475344 ARHGEF11O15085 1522 aa0.6□□□□□ -2.31
LTN1-204ENST00000475344 TRBV6-4A0A1B0GX49 114 aa0.6□□□□□ -2.31
LTN1-204ENST00000475344 NUPR1O60356 82 aa0.6□□□□□ -2.31
LTN1-204ENST00000475344 KLF7O75840 302 aaPredicted RBP0.6□□□□□ -2.31
LTN1-204ENST00000475344 NFYBP25208 207 aa0.6□□□□□ -2.31
LTN1-204ENST00000475344 INSL3P51460 131 aa0.6□□□□□ -2.31
LTN1-204ENST00000475344 DYNLT3P51808 116 aa0.6□□□□□ -2.31
LTN1-204ENST00000475344 ARF6P62330 175 aa0.6□□□□□ -2.31
LTN1-204ENST00000475344 PSG9Q00887 426 aa0.6□□□□□ -2.31
LTN1-204ENST00000475344 C1orf134Q5TEV5 83 aa0.6□□□□□ -2.31
LTN1-204ENST00000475344 LINC00322Q6ZN03 302 aaPredicted RBP0.6□□□□□ -2.31
LTN1-204ENST00000475344 CANT1Q8WVQ1 401 aa0.6□□□□□ -2.31
LTN1-204ENST00000475344 TP53RKQ96S44 253 aa0.6□□□□□ -2.31
LTN1-204ENST00000475344 TMEM14CQ9P0S9 112 aa0.6□□□□□ -2.31
LTN1-204ENST00000475344 PYCARDQ9ULZ3 195 aa0.6□□□□□ -2.31
LTN1-204ENST00000475344 NINQ8N4C6 2090 aa0.6□□□□□ -2.31
LTN1-204ENST00000475344 TANC2Q9HCD6 1990 aa0.59□□□□□ -2.31
LTN1-204ENST00000475344 A0A1W2PPM0 123 aa0.59□□□□□ -2.31
LTN1-204ENST00000475344 TLCD2A6NGC4 264 aa0.59□□□□□ -2.31
LTN1-204ENST00000475344 NCR3O14931 201 aa0.59□□□□□ -2.31
LTN1-204ENST00000475344 GGCTO75223 188 aaKnown RBP0.59□□□□□ -2.31
LTN1-204ENST00000475344 NDUFC2O95298 119 aa0.59□□□□□ -2.31
LTN1-204ENST00000475344 IGLV1-51P01701 117 aa0.59□□□□□ -2.31
LTN1-204ENST00000475344 CRHP06850 196 aa0.59□□□□□ -2.31
LTN1-204ENST00000475344 HLA-EP13747 358 aa0.59□□□□□ -2.31
LTN1-204ENST00000475344 BASP1P80723 227 aaKnown RBP0.59□□□□□ -2.31
LTN1-204ENST00000475344 MYL5Q02045 173 aa0.59□□□□□ -2.31
LTN1-204ENST00000475344 EIF5AL1Q6IS14 154 aaKnown RBP0.59□□□□□ -2.31
LTN1-204ENST00000475344 PATE2Q6UY27 113 aa0.59□□□□□ -2.31
LTN1-204ENST00000475344 Q8N6K4 173 aa0.59□□□□□ -2.31
LTN1-204ENST00000475344 CDC26Q8NHZ8 85 aa0.59□□□□□ -2.31
LTN1-204ENST00000475344 TEX37Q96LM6 180 aa0.59□□□□□ -2.31
LTN1-204ENST00000475344 PAIP2Q9BPZ3 127 aaKnown RBP0.59□□□□□ -2.31
LTN1-204ENST00000475344 ORMDL1Q9P0S3 153 aa0.59□□□□□ -2.31
LTN1-204ENST00000475344 SS18L2Q9UHA2 77 aa0.59□□□□□ -2.31
LTN1-204ENST00000475344 LY96Q9Y6Y9 160 aa0.59□□□□□ -2.31
LTN1-204ENST00000475344 IGLV3-32A0A0A0MS00 114 aa0.58□□□□□ -2.32
LTN1-204ENST00000475344 TRAV10A0A0B4J240 114 aa0.58□□□□□ -2.32
LTN1-204ENST00000475344 IGHV1-58A0A0C4DH39 117 aa0.58□□□□□ -2.32
LTN1-204ENST00000475344 DUXBA0A1W2PPF3 345 aa0.58□□□□□ -2.32
LTN1-204ENST00000475344 E7EUB6 86 aa0.58□□□□□ -2.32
LTN1-204ENST00000475344 G3V2T6 193 aa0.58□□□□□ -2.32
LTN1-204ENST00000475344 ATG12O94817 140 aa0.58□□□□□ -2.32
LTN1-204ENST00000475344 CXCL1P09341 107 aa0.58□□□□□ -2.32
LTN1-204ENST00000475344 DSCR4P56555 118 aaPredicted RBP0.58□□□□□ -2.32
LTN1-204ENST00000475344 SNCBQ16143 134 aa0.58□□□□□ -2.32
LTN1-204ENST00000475344 C4orf22Q6V702 233 aa0.58□□□□□ -2.32
LTN1-204ENST00000475344 ZNF833PQ6ZTB9 187 aa0.58□□□□□ -2.32
LTN1-204ENST00000475344 PLPP5Q8NEB5 264 aa0.58□□□□□ -2.32
LTN1-204ENST00000475344 OR5D14Q8NGL3 314 aa0.58□□□□□ -2.32
LTN1-204ENST00000475344 Q8TAT8 98 aa0.58□□□□□ -2.32
LTN1-204ENST00000475344 POP5Q969H6 163 aaKnown RBP0.58□□□□□ -2.32
LTN1-204ENST00000475344 ZHX1-C8orf76Q96EF9 292 aa0.58□□□□□ -2.32
LTN1-204ENST00000475344 LINC00052Q96N35 136 aa0.58□□□□□ -2.32
LTN1-204ENST00000475344 GGACTQ9BVM4 153 aa0.58□□□□□ -2.32
LTN1-204ENST00000475344 PSTPIP2Q9H939 334 aa0.58□□□□□ -2.32
LTN1-204ENST00000475344 POPDC3Q9HBV1 291 aa0.58□□□□□ -2.32
LTN1-204ENST00000475344 COL1A1P02452 1464 aaPredicted RBP0.58□□□□□ -2.32
LTN1-204ENST00000475344 CEP164Q9UPV0 1460 aa0.58□□□□□ -2.32
LTN1-204ENST00000475344 KNTC1P50748 2209 aa0.58□□□□□ -2.32
LTN1-204ENST00000475344 H7C1C5 153 aa0.57□□□□□ -2.32
LTN1-204ENST00000475344 PIAS1O75925 651 aa0.57□□□□□ -2.32
LTN1-204ENST00000475344 PHBP35232 272 aa0.57□□□□□ -2.32
LTN1-204ENST00000475344 TMBIM6P55061 237 aa0.57□□□□□ -2.32
LTN1-204ENST00000475344 ARPP19P56211 112 aa0.57□□□□□ -2.32
LTN1-204ENST00000475344 LCN6P62502 163 aa0.57□□□□□ -2.32
LTN1-204ENST00000475344 CDK6Q00534 326 aa0.57□□□□□ -2.32
LTN1-204ENST00000475344 AKR1C8PQ5T2L2 129 aa0.57□□□□□ -2.32
LTN1-204ENST00000475344 KRTAP26-1Q6PEX3 210 aa0.57□□□□□ -2.32
LTN1-204ENST00000475344 GKN2Q86XP6 184 aa0.57□□□□□ -2.32
LTN1-204ENST00000475344 SBSPONQ8IVN8 264 aa0.57□□□□□ -2.32
LTN1-204ENST00000475344 ZNF431Q8TF32 576 aaPredicted RBP0.57□□□□□ -2.32
LTN1-204ENST00000475344 ASB4Q9Y574 426 aa0.57□□□□□ -2.32
LTN1-204ENST00000475344 PTPRDP23468 1912 aa0.57□□□□□ -2.32
LTN1-204ENST00000475344 MUC4Q99102 2169 aa0.57□□□□□ -2.32
LTN1-204ENST00000475344 PHRF1Q9P1Y6 1649 aaKnown RBP0.56□□□□□ -2.32
LTN1-204ENST00000475344 A0A087WSZ3 146 aa0.56□□□□□ -2.32
LTN1-204ENST00000475344 ODAMA1E959 279 aa0.56□□□□□ -2.32
LTN1-204ENST00000475344 C17orf112F2Z3M2 114 aa0.56□□□□□ -2.32
LTN1-204ENST00000475344 K7ERJ3 54 aa0.56□□□□□ -2.32
LTN1-204ENST00000475344 M0R233 179 aa0.56□□□□□ -2.32
LTN1-204ENST00000475344 AIPO00170 330 aa0.56□□□□□ -2.32
LTN1-204ENST00000475344 ERC2-IT1O76042 136 aa0.56□□□□□ -2.32
LTN1-204ENST00000475344 IFNA1P01562 189 aa0.56□□□□□ -2.32
LTN1-204ENST00000475344 RPL19P84098 196 aaKnown RBP0.56□□□□□ -2.32
LTN1-204ENST00000475344 MSMO1Q15800 293 aa0.56□□□□□ -2.32
LTN1-204ENST00000475344 GRINAQ7Z429 371 aa0.56□□□□□ -2.32
LTN1-204ENST00000475344 SMIM20Q8N5G0 67 aa0.56□□□□□ -2.32
LTN1-204ENST00000475344 OR4K15Q8NH41 348 aa0.56□□□□□ -2.32
LTN1-204ENST00000475344 AP3S1Q92572 193 aa0.56□□□□□ -2.32
LTN1-204ENST00000475344 RAB37Q96AX2 223 aa0.56□□□□□ -2.32
LTN1-204ENST00000475344 CHCHD1Q96BP2 118 aaKnown RBP0.56□□□□□ -2.32
LTN1-204ENST00000475344 LYSMD1Q96S90 227 aa0.56□□□□□ -2.32
LTN1-204ENST00000475344 GPX7Q96SL4 187 aaPredicted RBP0.56□□□□□ -2.32
LTN1-204ENST00000475344 GINS3Q9BRX5 216 aa0.56□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms