RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 OR2T8A6NH00 312 aa16.99■□□□□ 0.31
CCM2-206ENST00000474617 LTAP01374 205 aa16.99■□□□□ 0.31
CCM2-206ENST00000474617 RPL15P61313 204 aaKnown RBP16.99■□□□□ 0.31
CCM2-206ENST00000474617 CT83Q5H943 113 aa16.99■□□□□ 0.31
CCM2-206ENST00000474617 BRD3OSQ6XYD6 125 aa16.99■□□□□ 0.31
CCM2-206ENST00000474617 AAMDCQ9H7C9 122 aa16.99■□□□□ 0.31
CCM2-206ENST00000474617 MED13LQ71F56 2210 aa16.99■□□□□ 0.31
CCM2-206ENST00000474617 A0A096LNT2 108 aa16.98■□□□□ 0.31
CCM2-206ENST00000474617 SMIM27A0A1W2PRY6 76 aa16.98■□□□□ 0.31
CCM2-206ENST00000474617 IGHG2P01859 326 aa16.98■□□□□ 0.31
CCM2-206ENST00000474617 OR5I1Q13606 314 aa16.98■□□□□ 0.31
CCM2-206ENST00000474617 TMEM75Q8N9X5 138 aa16.98■□□□□ 0.31
CCM2-206ENST00000474617 MLST8Q9BVC4 326 aa16.98■□□□□ 0.31
CCM2-206ENST00000474617 TRAPPC1Q9Y5R8 145 aa16.98■□□□□ 0.31
CCM2-206ENST00000474617 S100A2P29034 98 aa16.97■□□□□ 0.31
CCM2-206ENST00000474617 MEOX2P50222 304 aa16.97■□□□□ 0.31
CCM2-206ENST00000474617 ATP5G2Q06055 141 aa16.97■□□□□ 0.31
CCM2-206ENST00000474617 GRAMD2BQ96HH9 432 aa16.97■□□□□ 0.31
CCM2-206ENST00000474617 ZNF414Q96IQ9 312 aa16.97■□□□□ 0.31
CCM2-206ENST00000474617 GNB1LQ9BYB4 327 aa16.97■□□□□ 0.31
CCM2-206ENST00000474617 ZFP30Q9Y2G7 519 aa16.97■□□□□ 0.31
CCM2-206ENST00000474617 ABCA1O95477 2261 aa16.97■□□□□ 0.31
CCM2-206ENST00000474617 ZNF705GA8MUZ8 300 aaPredicted RBP16.96■□□□□ 0.31
CCM2-206ENST00000474617 GATCO43716 136 aaKnown RBP16.96■□□□□ 0.31
CCM2-206ENST00000474617 AMY1AP04745 511 aa16.96■□□□□ 0.31
CCM2-206ENST00000474617 FAM209BQ5JX69 171 aa16.96■□□□□ 0.31
CCM2-206ENST00000474617 C1orf194Q5T5A4 169 aa16.96■□□□□ 0.31
CCM2-206ENST00000474617 SIGLEC15Q6ZMC9 328 aa16.96■□□□□ 0.31
CCM2-206ENST00000474617 USMG5Q96IX5 58 aa16.96■□□□□ 0.31
CCM2-206ENST00000474617 SLC17A3O00476 420 aa16.96■□□□□ 0.3
CCM2-206ENST00000474617 ADMP35318 185 aa16.96■□□□□ 0.3
CCM2-206ENST00000474617 CSN1S1P47710 185 aa16.96■□□□□ 0.3
CCM2-206ENST00000474617 GNG5P63218 68 aa16.96■□□□□ 0.3
CCM2-206ENST00000474617 TMEM183AQ8IXX5 376 aa16.96■□□□□ 0.3
CCM2-206ENST00000474617 LINC00479Q96M42 142 aa16.96■□□□□ 0.3
CCM2-206ENST00000474617 RNASE7Q9H1E1 156 aaKnown RBP16.96■□□□□ 0.3
CCM2-206ENST00000474617 COL12A1Q99715 3063 aa16.96■□□□□ 0.3
CCM2-206ENST00000474617 IGHV3OR16-10A0A075B7F0 116 aa16.95■□□□□ 0.3
CCM2-206ENST00000474617 H3BUX3 64 aa16.95■□□□□ 0.3
CCM2-206ENST00000474617 GPR183P32249 361 aa16.95■□□□□ 0.3
CCM2-206ENST00000474617 DEFB113Q30KQ7 82 aa16.95■□□□□ 0.3
CCM2-206ENST00000474617 PRSS57Q6UWY2 283 aa16.95■□□□□ 0.3
CCM2-206ENST00000474617 TMEM219Q86XT9 240 aa16.95■□□□□ 0.3
CCM2-206ENST00000474617 ZFYVE26Q68DK2 2539 aa16.95■□□□□ 0.3
CCM2-206ENST00000474617 FAM231BA6NCW3 169 aa16.94■□□□□ 0.3
CCM2-206ENST00000474617 CLEC3BP05452 202 aa16.94■□□□□ 0.3
CCM2-206ENST00000474617 OR4B1Q8NGF8 309 aa16.94■□□□□ 0.3
CCM2-206ENST00000474617 OR5R1Q8NH85 324 aa16.94■□□□□ 0.3
CCM2-206ENST00000474617 MBD6Q96DN6 1003 aa16.94■□□□□ 0.3
CCM2-206ENST00000474617 TRAV34A0A0B4J273 112 aa16.93■□□□□ 0.3
CCM2-206ENST00000474617 IZUMO1RA6ND01 250 aa16.93■□□□□ 0.3
CCM2-206ENST00000474617 G3V318 75 aa16.93■□□□□ 0.3
CCM2-206ENST00000474617 Q86TA4 180 aa16.93■□□□□ 0.3
CCM2-206ENST00000474617 HIST3H2BBQ8N257 126 aa16.93■□□□□ 0.3
CCM2-206ENST00000474617 SERTAD4Q9NUC0 356 aa16.93■□□□□ 0.3
CCM2-206ENST00000474617 SOX21Q9Y651 276 aaPredicted RBP16.93■□□□□ 0.3
CCM2-206ENST00000474617 S4R3C0 116 aa16.93■□□□□ 0.3
CCM2-206ENST00000474617 A0A087X0K7 114 aa16.92■□□□□ 0.3
CCM2-206ENST00000474617 A1L4Q6 167 aa16.92■□□□□ 0.3
CCM2-206ENST00000474617 TOMM20LQ6UXN7 152 aa16.92■□□□□ 0.3
CCM2-206ENST00000474617 OR8I2Q8N0Y5 310 aa16.92■□□□□ 0.3
CCM2-206ENST00000474617 TSKUQ8WUA8 353 aa16.92■□□□□ 0.3
CCM2-206ENST00000474617 C12orf57Q99622 126 aa16.92■□□□□ 0.3
CCM2-206ENST00000474617 GFRA4Q9GZZ7 299 aa16.92■□□□□ 0.3
CCM2-206ENST00000474617 ZFAND3Q9H8U3 227 aa16.92■□□□□ 0.3
CCM2-206ENST00000474617 NAT8BQ9UHF3 227 aa16.92■□□□□ 0.3
CCM2-206ENST00000474617 C9orf139Q6ZV77 190 aa16.91■□□□□ 0.3
CCM2-206ENST00000474617 ATP5L2Q7Z4Y8 100 aa16.91■□□□□ 0.3
CCM2-206ENST00000474617 NUDT10Q8NFP7 164 aa16.91■□□□□ 0.3
CCM2-206ENST00000474617 WIPF2Q8TF74 440 aaPredicted RBP16.91■□□□□ 0.3
CCM2-206ENST00000474617 NRGNQ92686 78 aa16.91■□□□□ 0.3
CCM2-206ENST00000474617 DAZAP1Q96EP5 407 aaKnown RBP16.91■□□□□ 0.3
CCM2-206ENST00000474617 NUDT11Q96G61 164 aa16.91■□□□□ 0.3
CCM2-206ENST00000474617 CCDC140Q96MF4 163 aa16.91■□□□□ 0.3
CCM2-206ENST00000474617 XKRY2A2RUG3 117 aa16.91■□□□□ 0.3
CCM2-206ENST00000474617 A8MWL6 223 aa16.91■□□□□ 0.3
CCM2-206ENST00000474617 PRSS22Q9GZN4 317 aa16.91■□□□□ 0.3
CCM2-206ENST00000474617 CLEC5AQ9NY25 188 aa16.91■□□□□ 0.3
CCM2-206ENST00000474617 RPH3ALQ9UNE2 315 aa16.91■□□□□ 0.3
CCM2-206ENST00000474617 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.9■□□□□ 0.32e-7■■■□□ 15.8
CCM2-206ENST00000474617 SPG11Q96JI7 2443 aa16.9■□□□□ 0.3
CCM2-206ENST00000474617 LRRK2Q5S007 2527 aa16.9■□□□□ 0.3
CCM2-206ENST00000474617 A0A0G2JLM5 398 aa16.9■□□□□ 0.3
CCM2-206ENST00000474617 IGHV3-23P01764 117 aa16.9■□□□□ 0.3
CCM2-206ENST00000474617 HLA-DQA1P01909 254 aa16.9■□□□□ 0.3
CCM2-206ENST00000474617 PSG3Q16557 428 aa16.9■□□□□ 0.3
CCM2-206ENST00000474617 GOLT1AQ6ZVE7 132 aa16.9■□□□□ 0.3
CCM2-206ENST00000474617 EXOC3-AS1Q8N2X6 119 aa16.9■□□□□ 0.3
CCM2-206ENST00000474617 TEX29Q8N6K0 151 aa16.9■□□□□ 0.3
CCM2-206ENST00000474617 METTL26Q96S19 204 aa16.9■□□□□ 0.3
CCM2-206ENST00000474617 RPP21Q9H633 154 aaKnown RBP16.9■□□□□ 0.3
CCM2-206ENST00000474617 TMEM89A2RUT3 159 aa16.89■□□□□ 0.29
CCM2-206ENST00000474617 C19orf71A6NCJ1 209 aa16.89■□□□□ 0.29
CCM2-206ENST00000474617 LINC01548A6NM66 108 aa16.89■□□□□ 0.29
CCM2-206ENST00000474617 DIRC3C9JPN6 131 aa16.89■□□□□ 0.29
CCM2-206ENST00000474617 P01737 135 aa16.89■□□□□ 0.29
CCM2-206ENST00000474617 TRGV3P03979 118 aa16.89■□□□□ 0.29
CCM2-206ENST00000474617 PPIFP30405 207 aaKnown RBP16.89■□□□□ 0.29
CCM2-206ENST00000474617 DNLZQ5SXM8 178 aa16.89■□□□□ 0.29
CCM2-206ENST00000474617 CLEC19AQ6UXS0 136 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms