RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 PCM1Q15154 2024 aa3.71□□□□□ -1.82
CCNL1-215ENST00000474539 ZNF561-AS1K7EIQ3 104 aa3.71□□□□□ -1.82
CCNL1-215ENST00000474539 NMBP08949 121 aa3.71□□□□□ -1.82
CCNL1-215ENST00000474539 STAG3L3P0CL85 134 aa3.71□□□□□ -1.82
CCNL1-215ENST00000474539 GATA2P23769 480 aaPredicted RBP3.71□□□□□ -1.82
CCNL1-215ENST00000474539 PLNP26678 52 aa3.71□□□□□ -1.82
CCNL1-215ENST00000474539 FOXG1P55316 489 aaPredicted RBP3.71□□□□□ -1.82
CCNL1-215ENST00000474539 FBLN7Q53RD9 439 aa3.71□□□□□ -1.82
CCNL1-215ENST00000474539 RUSC1-AS1Q66K80 236 aa3.71□□□□□ -1.82
CCNL1-215ENST00000474539 PHLDA1Q8WV24 401 aaPredicted RBP3.71□□□□□ -1.82
CCNL1-215ENST00000474539 CHCHD1Q96BP2 118 aaKnown RBP3.71□□□□□ -1.82
CCNL1-215ENST00000474539 WFDC6Q9BQY6 131 aa3.71□□□□□ -1.82
CCNL1-215ENST00000474539 IGKV1-12A0A0C4DH73 117 aa3.7□□□□□ -1.82
CCNL1-215ENST00000474539 A0A1B0GW64 132 aa3.7□□□□□ -1.82
CCNL1-215ENST00000474539 PCP4L1A6NKN8 68 aa3.7□□□□□ -1.82
CCNL1-215ENST00000474539 LINC01548A6NM66 108 aa3.7□□□□□ -1.82
CCNL1-215ENST00000474539 SRRM4A7MD48 611 aaKnown RBP3.7□□□□□ -1.82
CCNL1-215ENST00000474539 INS-IGF2F8WCM5 200 aa3.7□□□□□ -1.82
CCNL1-215ENST00000474539 IGKV1D-12P01611 117 aa3.7□□□□□ -1.82
CCNL1-215ENST00000474539 KIAA1644Q3SXP7 199 aa3.7□□□□□ -1.82
CCNL1-215ENST00000474539 Q8NA96 180 aa3.7□□□□□ -1.82
CCNL1-215ENST00000474539 WIPF2Q8TF74 440 aaPredicted RBP3.7□□□□□ -1.82
CCNL1-215ENST00000474539 CHTOPQ9Y3Y2 248 aaKnown RBP3.7□□□□□ -1.82
CCNL1-215ENST00000474539 VWC2LB2RUY7 222 aa3.7□□□□□ -1.82
CCNL1-215ENST00000474539 CD28P10747 220 aa3.7□□□□□ -1.82
CCNL1-215ENST00000474539 NTF4P34130 210 aa3.7□□□□□ -1.82
CCNL1-215ENST00000474539 KRTAP27-1Q3LI81 207 aa3.7□□□□□ -1.82
CCNL1-215ENST00000474539 TEX43Q6ZNM6 134 aa3.7□□□□□ -1.82
CCNL1-215ENST00000474539 PARLQ9H300 379 aa3.7□□□□□ -1.82
CCNL1-215ENST00000474539 C7orf77A4D0Y5 90 aa3.7□□□□□ -1.82
CCNL1-215ENST00000474539 IGLV3-1P01715 115 aa3.7□□□□□ -1.82
CCNL1-215ENST00000474539 IGHG2P01859 326 aa3.7□□□□□ -1.82
CCNL1-215ENST00000474539 ADMP35318 185 aa3.7□□□□□ -1.82
CCNL1-215ENST00000474539 BOD1L2Q8IYS8 172 aa3.7□□□□□ -1.82
CCNL1-215ENST00000474539 LINC00482Q8N8I6 264 aa3.7□□□□□ -1.82
CCNL1-215ENST00000474539 TMEM141Q96I45 108 aa3.7□□□□□ -1.82
CCNL1-215ENST00000474539 NDUFAF3Q9BU61 184 aa3.7□□□□□ -1.82
CCNL1-215ENST00000474539 MRPL18Q9H0U6 180 aaKnown RBP3.7□□□□□ -1.82
CCNL1-215ENST00000474539 DCAF16Q9NXF7 216 aa3.7□□□□□ -1.82
CCNL1-215ENST00000474539 TDRG1Q3Y452 100 aa3.7□□□□□ -1.82
CCNL1-215ENST00000474539 THAP8Q8NA92 274 aa3.7□□□□□ -1.82
CCNL1-215ENST00000474539 ZNF414Q96IQ9 312 aa3.7□□□□□ -1.82
CCNL1-215ENST00000474539 CSTL1Q9H114 145 aa3.7□□□□□ -1.82
CCNL1-215ENST00000474539 CNTRLQ7Z7A1 2325 aa3.69□□□□□ -1.82
CCNL1-215ENST00000474539 ZNF815PA8K554 130 aa3.69□□□□□ -1.82
CCNL1-215ENST00000474539 LGALS9O00182 355 aa3.69□□□□□ -1.82
CCNL1-215ENST00000474539 C17orf58Q2M2W7 97 aa3.69□□□□□ -1.82
CCNL1-215ENST00000474539 Q6YL49 198 aa3.69□□□□□ -1.82
CCNL1-215ENST00000474539 LYPD6Q86Y78 171 aa3.69□□□□□ -1.82
CCNL1-215ENST00000474539 C9orf62Q8N4C0 152 aa3.69□□□□□ -1.82
CCNL1-215ENST00000474539 C11orf44Q8N8P7 122 aa3.69□□□□□ -1.82
CCNL1-215ENST00000474539 OR13C6PQ8NH95 151 aa3.69□□□□□ -1.82
CCNL1-215ENST00000474539 RARRES2Q99969 163 aa3.69□□□□□ -1.82
CCNL1-215ENST00000474539 ANAPC10Q9UM13 185 aa3.69□□□□□ -1.82
CCNL1-215ENST00000474539 COL5A1P20908 1838 aaPredicted RBP3.69□□□□□ -1.82
CCNL1-215ENST00000474539 SPTA1P02549 2419 aa3.69□□□□□ -1.82
CCNL1-215ENST00000474539 TMEM238C9JI98 176 aa3.69□□□□□ -1.82
CCNL1-215ENST00000474539 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.69□□□□□ -1.82
CCNL1-215ENST00000474539 CCL25O15444 150 aa3.69□□□□□ -1.82
CCNL1-215ENST00000474539 TCRAP04437 139 aa3.69□□□□□ -1.82
CCNL1-215ENST00000474539 IGHV4-31P0DP07 118 aa3.69□□□□□ -1.82
CCNL1-215ENST00000474539 RUNX1Q01196 453 aa3.69□□□□□ -1.82
CCNL1-215ENST00000474539 TREML4Q6UXN2 200 aa3.69□□□□□ -1.82
CCNL1-215ENST00000474539 Q6ZR03 302 aa3.69□□□□□ -1.82
CCNL1-215ENST00000474539 MIR17HGQ75NE6 70 aa3.69□□□□□ -1.82
CCNL1-215ENST00000474539 TMEM243Q9BU79 118 aa3.69□□□□□ -1.82
CCNL1-215ENST00000474539 MRPL16Q9NX20 251 aaKnown RBP3.69□□□□□ -1.82
CCNL1-215ENST00000474539 ASXL3Q9C0F0 2248 aa3.69□□□□□ -1.82
CCNL1-215ENST00000474539 A0A0A6YYD4 124 aa3.69□□□□□ -1.82
CCNL1-215ENST00000474539 IGKV1D-13A0A0B4J2D9 117 aa3.69□□□□□ -1.82
CCNL1-215ENST00000474539 A6NDX4 124 aa3.69□□□□□ -1.82
CCNL1-215ENST00000474539 K7EM74 188 aa3.69□□□□□ -1.82
CCNL1-215ENST00000474539 M0R2P5 195 aa3.69□□□□□ -1.82
CCNL1-215ENST00000474539 PAX4O43316 350 aa3.69□□□□□ -1.82
CCNL1-215ENST00000474539 CRLF1O75462 422 aa3.69□□□□□ -1.82
CCNL1-215ENST00000474539 IGKV1-13P0DP09 117 aa3.69□□□□□ -1.82
CCNL1-215ENST00000474539 RPL24P83731 157 aaKnown RBP3.69□□□□□ -1.82
CCNL1-215ENST00000474539 PMS2P11Q13670 270 aa3.69□□□□□ -1.82
CCNL1-215ENST00000474539 C15orf53Q8NAA6 179 aa3.69□□□□□ -1.82
CCNL1-215ENST00000474539 MRAPQ8TCY5 172 aa3.69□□□□□ -1.82
CCNL1-215ENST00000474539 TBX15Q96SF7 602 aa3.69□□□□□ -1.82
CCNL1-215ENST00000474539 WDR81Q562E7 1941 aa3.69□□□□□ -1.82
CCNL1-215ENST00000474539 PIKFYVEQ9Y2I7 2098 aa3.69□□□□□ -1.82
CCNL1-215ENST00000474539 IGHV3-49A0A0A0MS15 119 aa3.68□□□□□ -1.82
CCNL1-215ENST00000474539 MYMXA0A1B0GTQ4 84 aa3.68□□□□□ -1.82
CCNL1-215ENST00000474539 FCN3O75636 299 aa3.68□□□□□ -1.82
CCNL1-215ENST00000474539 NCR2O95944 276 aa3.68□□□□□ -1.82
CCNL1-215ENST00000474539 HBDP02042 147 aa3.68□□□□□ -1.82
CCNL1-215ENST00000474539 PRB1P04280 392 aa3.68□□□□□ -1.82
CCNL1-215ENST00000474539 NHLRC4P0CG21 123 aaPredicted RBP3.68□□□□□ -1.82
CCNL1-215ENST00000474539 AZU1P20160 251 aa3.68□□□□□ -1.82
CCNL1-215ENST00000474539 HOXD3P31249 432 aaPredicted RBP3.68□□□□□ -1.82
CCNL1-215ENST00000474539 S100A7L2Q5SY68 101 aa3.68□□□□□ -1.82
CCNL1-215ENST00000474539 TMEM170BQ5T4T1 132 aa3.68□□□□□ -1.82
CCNL1-215ENST00000474539 CBLN2Q8IUK8 224 aa3.68□□□□□ -1.82
CCNL1-215ENST00000474539 CITED2Q99967 270 aaPredicted RBP3.68□□□□□ -1.82
CCNL1-215ENST00000474539 AHCTF1Q8WYP5 2266 aa3.68□□□□□ -1.82
CCNL1-215ENST00000474539 SEC16AO15027 2179 aa3.68□□□□□ -1.82
CCNL1-215ENST00000474539 IGKV1-27A0A075B6S5 117 aa3.68□□□□□ -1.82
CCNL1-215ENST00000474539 TRAV8-1A0A0A6YYK1 113 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms