RNA–Protein interactions for RNA: ENST00000472155.5

UBXN11-213, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-213ENST00000472155 RNF125Q96EQ8 232 aa11.79□□□□□ -0.52
UBXN11-213ENST00000472155 FAM208BQ5VWN6 2430 aa11.79□□□□□ -0.52
UBXN11-213ENST00000472155 IZUMO1RA6ND01 250 aa11.79□□□□□ -0.52
UBXN11-213ENST00000472155 OR2T8A6NH00 312 aa11.79□□□□□ -0.52
UBXN11-213ENST00000472155 IGLV2-11P01706 119 aa11.79□□□□□ -0.52
UBXN11-213ENST00000472155 SRIP30626 198 aa11.79□□□□□ -0.52
UBXN11-213ENST00000472155 TDRG1Q3Y452 100 aa11.79□□□□□ -0.52
UBXN11-213ENST00000472155 PIP4P2Q8N4L2 257 aa11.79□□□□□ -0.52
UBXN11-213ENST00000472155 GPR82Q96P67 336 aa11.79□□□□□ -0.52
UBXN11-213ENST00000472155 CSPG4Q6UVK1 2322 aa11.79□□□□□ -0.52
UBXN11-213ENST00000472155 FBN2P35556 2912 aa11.78□□□□□ -0.52
UBXN11-213ENST00000472155 IGHV2-70DA0A0C4DH43 119 aa11.78□□□□□ -0.52
UBXN11-213ENST00000472155 AMY1AP04745 511 aa11.78□□□□□ -0.52
UBXN11-213ENST00000472155 SAA4P35542 130 aa11.78□□□□□ -0.52
UBXN11-213ENST00000472155 CAMPP49913 170 aa11.78□□□□□ -0.52
UBXN11-213ENST00000472155 Q8N9W7 124 aa11.78□□□□□ -0.52
UBXN11-213ENST00000472155 MS4A10Q96PG2 267 aa11.78□□□□□ -0.52
UBXN11-213ENST00000472155 SHANK2-AS3Q9BTD1 123 aa11.78□□□□□ -0.52
UBXN11-213ENST00000472155 LRRK2Q5S007 2527 aa11.78□□□□□ -0.52
UBXN11-213ENST00000472155 H3BRN7 92 aa11.78□□□□□ -0.52
UBXN11-213ENST00000472155 GNG7O60262 68 aa11.78□□□□□ -0.52
UBXN11-213ENST00000472155 SCGB1D1O95968 90 aa11.78□□□□□ -0.52
UBXN11-213ENST00000472155 LTAP01374 205 aa11.78□□□□□ -0.52
UBXN11-213ENST00000472155 PRNTQ86SH4 94 aa11.78□□□□□ -0.52
UBXN11-213ENST00000472155 GTSF1Q8WW33 167 aa11.78□□□□□ -0.52
UBXN11-213ENST00000472155 IGHV4-39P01824 125 aa11.77□□□□□ -0.52
UBXN11-213ENST00000472155 HIST1H1EP10412 219 aaKnown RBP11.77□□□□□ -0.52
UBXN11-213ENST00000472155 C1orf122Q6ZSJ8 110 aa11.77□□□□□ -0.52
UBXN11-213ENST00000472155 FAM231DQ6ZW35 169 aa11.77□□□□□ -0.52
UBXN11-213ENST00000472155 C14orf144Q96I85 54 aa11.77□□□□□ -0.52
UBXN11-213ENST00000472155 CHRDL1Q9BU40 450 aa11.77□□□□□ -0.52
UBXN11-213ENST00000472155 SOX21Q9Y651 276 aaPredicted RBP11.77□□□□□ -0.52
UBXN11-213ENST00000472155 MRPS12O15235 138 aaKnown RBP11.77□□□□□ -0.53
UBXN11-213ENST00000472155 TOMM40O96008 361 aa11.77□□□□□ -0.53
UBXN11-213ENST00000472155 Q56UQ5 140 aa11.77□□□□□ -0.53
UBXN11-213ENST00000472155 GRAMD2BQ96HH9 432 aa11.77□□□□□ -0.53
UBXN11-213ENST00000472155 SRSF8Q9BRL6 282 aaKnown RBP11.77□□□□□ -0.53
UBXN11-213ENST00000472155 ZNF462Q96JM2 2506 aa11.77□□□□□ -0.53
UBXN11-213ENST00000472155 TRBV19A0A075B6N1 114 aa11.76□□□□□ -0.53
UBXN11-213ENST00000472155 IGLC2P0DOY2 106 aa11.76□□□□□ -0.53
UBXN11-213ENST00000472155 DDTP30046 118 aa11.76□□□□□ -0.53
UBXN11-213ENST00000472155 IGFL4Q6B9Z1 124 aa11.76□□□□□ -0.53
UBXN11-213ENST00000472155 WI2-2373I1.2A0A1W2PRP0 233 aa11.76□□□□□ -0.53
UBXN11-213ENST00000472155 PKIAP61925 76 aa11.76□□□□□ -0.53
UBXN11-213ENST00000472155 RPL19P84098 196 aaKnown RBP11.76□□□□□ -0.53
UBXN11-213ENST00000472155 Q86TA4 180 aa11.76□□□□□ -0.53
UBXN11-213ENST00000472155 TMEM68Q96MH6 324 aa11.76□□□□□ -0.53
UBXN11-213ENST00000472155 NPIPB5A8MRT5 1133 aa11.75□□□□□ -0.53
UBXN11-213ENST00000472155 G3V318 75 aa11.75□□□□□ -0.53
UBXN11-213ENST00000472155 EBI3Q14213 229 aa11.75□□□□□ -0.53
UBXN11-213ENST00000472155 ECSCRQ19T08 205 aa11.75□□□□□ -0.53
UBXN11-213ENST00000472155 CCDC144NLQ6NUI1 221 aa11.75□□□□□ -0.53
UBXN11-213ENST00000472155 SIGLEC15Q6ZMC9 328 aa11.75□□□□□ -0.53
UBXN11-213ENST00000472155 FAM19A2Q8N3H0 131 aa11.75□□□□□ -0.53
UBXN11-213ENST00000472155 TTC9CQ8N5M4 171 aa11.75□□□□□ -0.53
UBXN11-213ENST00000472155 ZNF414Q96IQ9 312 aa11.75□□□□□ -0.53
UBXN11-213ENST00000472155 NOL4LQ96MY1 436 aaPredicted RBP11.75□□□□□ -0.53
UBXN11-213ENST00000472155 TMEM14CQ9P0S9 112 aa11.75□□□□□ -0.53
UBXN11-213ENST00000472155 POLR3KQ9Y2Y1 108 aaPredicted RBP11.75□□□□□ -0.53
UBXN11-213ENST00000472155 C19orf71A6NCJ1 209 aa11.75□□□□□ -0.53
UBXN11-213ENST00000472155 HLA-DRB1P01911 266 aa11.75□□□□□ -0.53
UBXN11-213ENST00000472155 APCSP02743 223 aa11.75□□□□□ -0.53
UBXN11-213ENST00000472155 TMEM219Q86XT9 240 aa11.75□□□□□ -0.53
UBXN11-213ENST00000472155 TSKUQ8WUA8 353 aa11.75□□□□□ -0.53
UBXN11-213ENST00000472155 PGLYRP4Q96LB8 373 aa11.75□□□□□ -0.53
UBXN11-213ENST00000472155 ZNF331Q9NQX6 463 aaPredicted RBP11.75□□□□□ -0.53
UBXN11-213ENST00000472155 OTORQ9NRC9 128 aa11.75□□□□□ -0.53
UBXN11-213ENST00000472155 C21orf62Q9NYP8 219 aa11.75□□□□□ -0.53
UBXN11-213ENST00000472155 TRBV9A0A0B4J1U6 114 aa11.74□□□□□ -0.53
UBXN11-213ENST00000472155 ZNF253O75346 499 aa11.74□□□□□ -0.53
UBXN11-213ENST00000472155 Q0VG73 95 aa11.74□□□□□ -0.53
UBXN11-213ENST00000472155 FMC1Q96HJ9 113 aa11.74□□□□□ -0.53
UBXN11-213ENST00000472155 PRSS22Q9GZN4 317 aa11.74□□□□□ -0.53
UBXN11-213ENST00000472155 CTSGP08311 255 aa11.74□□□□□ -0.53
UBXN11-213ENST00000472155 MFAP4P55083 255 aa11.74□□□□□ -0.53
UBXN11-213ENST00000472155 SSTP61278 116 aa11.74□□□□□ -0.53
UBXN11-213ENST00000472155 DNLZQ5SXM8 178 aa11.74□□□□□ -0.53
UBXN11-213ENST00000472155 MINOS1Q5TGZ0 78 aa11.74□□□□□ -0.53
UBXN11-213ENST00000472155 WDR73Q6P4I2 378 aa11.74□□□□□ -0.53
UBXN11-213ENST00000472155 BPIFA4PQ86YQ2 179 aa11.74□□□□□ -0.53
UBXN11-213ENST00000472155 TMUB1Q9BVT8 246 aa11.74□□□□□ -0.53
UBXN11-213ENST00000472155 MINOS1-NBL1R4GNA1 71 aa11.74□□□□□ -0.53
UBXN11-213ENST00000472155 ATP6V0E1O15342 81 aa11.73□□□□□ -0.53
UBXN11-213ENST00000472155 PAX1P15863 534 aa11.73□□□□□ -0.53
UBXN11-213ENST00000472155 PMCHP20382 165 aa11.73□□□□□ -0.53
UBXN11-213ENST00000472155 UBE2E1P51965 193 aa11.73□□□□□ -0.53
UBXN11-213ENST00000472155 OR2D3Q8NGH3 330 aa11.73□□□□□ -0.53
UBXN11-213ENST00000472155 ZC2HC1AQ96GY0 325 aa11.73□□□□□ -0.53
UBXN11-213ENST00000472155 RPP21Q9H633 154 aaKnown RBP11.73□□□□□ -0.53
UBXN11-213ENST00000472155 LINC00527Q9UJ94 153 aa11.73□□□□□ -0.53
UBXN11-213ENST00000472155 FBXL7Q9UJT9 491 aa11.73□□□□□ -0.53
UBXN11-213ENST00000472155 A0A1W2PS18 150 aa11.73□□□□□ -0.53
UBXN11-213ENST00000472155 OVOL3O00110 214 aa11.73□□□□□ -0.53
UBXN11-213ENST00000472155 HLA-DMBP28068 263 aa11.73□□□□□ -0.53
UBXN11-213ENST00000472155 BRD3OSQ6XYD6 125 aa11.73□□□□□ -0.53
UBXN11-213ENST00000472155 SAMD10Q9BYL1 202 aa11.73□□□□□ -0.53
UBXN11-213ENST00000472155 NAGKQ9UJ70 344 aa11.73□□□□□ -0.53
UBXN11-213ENST00000472155 CENPVL3A0A0U1RRI6 287 aa11.73□□□□□ -0.53
UBXN11-213ENST00000472155 TSTD3H0UI37 97 aa11.73□□□□□ -0.53
UBXN11-213ENST00000472155 P01737 135 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms