RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 HIST1H2BKO60814 126 aa2.84□□□□□ -1.95
SMC5-202ENST00000471372 HIST1H2BJP06899 126 aa2.84□□□□□ -1.95
SMC5-202ENST00000471372 GPX1P07203 203 aa2.84□□□□□ -1.95
SMC5-202ENST00000471372 EIF3IQ13347 325 aaKnown RBP2.84□□□□□ -1.95
SMC5-202ENST00000471372 OR2T35Q8NGX2 323 aa2.84□□□□□ -1.95
SMC5-202ENST00000471372 CACYBPQ9HB71 228 aaKnown RBP2.84□□□□□ -1.95
SMC5-202ENST00000471372 BAHCC1Q9P281 2608 aa2.84□□□□□ -1.96
SMC5-202ENST00000471372 OVOL1O14753 267 aa2.83□□□□□ -1.96
SMC5-202ENST00000471372 RER1O15258 196 aa2.83□□□□□ -1.96
SMC5-202ENST00000471372 ROMO1P60602 79 aa2.83□□□□□ -1.96
SMC5-202ENST00000471372 EML6Q6ZMW3 1958 aa2.83□□□□□ -1.96
SMC5-202ENST00000471372 BCL9O00512 1426 aa2.83□□□□□ -1.96
SMC5-202ENST00000471372 ADGBQ8N7X0 1667 aa2.82□□□□□ -1.96
SMC5-202ENST00000471372 FN1P02751 2386 aaKnown RBP2.82□□□□□ -1.96
SMC5-202ENST00000471372 N4BP2Q86UW6 1770 aaPredicted RBP2.82□□□□□ -1.96
SMC5-202ENST00000471372 NUP98P52948 1817 aa2.82□□□□□ -1.96
SMC5-202ENST00000471372 TRAV14DV4A0A0A6YYC5 116 aa2.82□□□□□ -1.96
SMC5-202ENST00000471372 TRAV12-1A0A0B4J245 112 aa2.82□□□□□ -1.96
SMC5-202ENST00000471372 OR1I1O60431 355 aa2.82□□□□□ -1.96
SMC5-202ENST00000471372 FABP2P12104 132 aa2.82□□□□□ -1.96
SMC5-202ENST00000471372 RPL35P42766 123 aaKnown RBP2.82□□□□□ -1.96
SMC5-202ENST00000471372 AIF1LQ9BQI0 150 aa2.82□□□□□ -1.96
SMC5-202ENST00000471372 NCAPD3P42695 1498 aa2.82□□□□□ -1.96
SMC5-202ENST00000471372 TRBV6-5A0A0K0K1A5 114 aa2.81□□□□□ -1.96
SMC5-202ENST00000471372 PDE6HQ13956 83 aa2.81□□□□□ -1.96
SMC5-202ENST00000471372 OR5D16Q8NGK9 328 aa2.81□□□□□ -1.96
SMC5-202ENST00000471372 CHCHD1Q96BP2 118 aaKnown RBP2.81□□□□□ -1.96
SMC5-202ENST00000471372 TAF9BQ9HBM6 251 aa2.81□□□□□ -1.96
SMC5-202ENST00000471372 LY96Q9Y6Y9 160 aa2.81□□□□□ -1.96
SMC5-202ENST00000471372 TAF1LQ8IZX4 1826 aa2.8□□□□□ -1.96
SMC5-202ENST00000471372 A0A087WX48 190 aa2.8□□□□□ -1.96
SMC5-202ENST00000471372 IFNA4P05014 189 aa2.8□□□□□ -1.96
SMC5-202ENST00000471372 SCGB1A1P11684 91 aa2.8□□□□□ -1.96
SMC5-202ENST00000471372 SDC2P34741 201 aa2.8□□□□□ -1.96
SMC5-202ENST00000471372 KLRD1Q13241 179 aa2.8□□□□□ -1.96
SMC5-202ENST00000471372 SFT2D1Q8WV19 159 aa2.8□□□□□ -1.96
SMC5-202ENST00000471372 POP5Q969H6 163 aaKnown RBP2.8□□□□□ -1.96
SMC5-202ENST00000471372 OR5AC2Q9NZP5 309 aa2.8□□□□□ -1.96
SMC5-202ENST00000471372 PCNX2A6NKB5 2137 aa2.8□□□□□ -1.96
SMC5-202ENST00000471372 TRAPPC8Q9Y2L5 1435 aa2.79□□□□□ -1.96
SMC5-202ENST00000471372 TRGV2A0A075B6R0 118 aa2.79□□□□□ -1.96
SMC5-202ENST00000471372 IGKV2D-26A0A0A0MRZ7 120 aa2.79□□□□□ -1.96
SMC5-202ENST00000471372 ARL5CA6NH57 179 aa2.79□□□□□ -1.96
SMC5-202ENST00000471372 IGLV1-51P01701 117 aa2.79□□□□□ -1.96
SMC5-202ENST00000471372 BRS3P32247 399 aa2.79□□□□□ -1.96
SMC5-202ENST00000471372 MICAL3Q7RTP6 2002 aa2.79□□□□□ -1.96
SMC5-202ENST00000471372 FHAD1B1AJZ9 1412 aa2.78□□□□□ -1.96
SMC5-202ENST00000471372 J3KT08 172 aa2.78□□□□□ -1.96
SMC5-202ENST00000471372 KPNA4O00629 521 aaPredicted RBP2.78□□□□□ -1.96
SMC5-202ENST00000471372 ARPC5O15511 151 aa2.78□□□□□ -1.96
SMC5-202ENST00000471372 DHFRP00374 187 aa2.78□□□□□ -1.96
SMC5-202ENST00000471372 C1orf134Q5TEV5 83 aa2.78□□□□□ -1.96
SMC5-202ENST00000471372 CLECL1Q8IZS7 167 aa2.78□□□□□ -1.96
SMC5-202ENST00000471372 TCEAL2Q9H3H9 227 aaPredicted RBP2.78□□□□□ -1.96
SMC5-202ENST00000471372 COL5A3P25940 1745 aaPredicted RBP2.78□□□□□ -1.96
SMC5-202ENST00000471372 COL4A5P29400 1685 aa2.78□□□□□ -1.96
SMC5-202ENST00000471372 ARHGEF11O15085 1522 aa2.78□□□□□ -1.97
SMC5-202ENST00000471372 MYO5AQ9Y4I1 1855 aaKnown RBP2.77□□□□□ -1.97
SMC5-202ENST00000471372 IGHV1-58A0A0C4DH39 117 aa2.77□□□□□ -1.97
SMC5-202ENST00000471372 F8W036 122 aa2.77□□□□□ -1.97
SMC5-202ENST00000471372 OR10J4P0C629 311 aa2.77□□□□□ -1.97
SMC5-202ENST00000471372 RPS28P62857 69 aaKnown RBP2.77□□□□□ -1.97
SMC5-202ENST00000471372 OR8B8Q15620 311 aa2.77□□□□□ -1.97
SMC5-202ENST00000471372 C10orf55Q5SWW7 151 aa2.77□□□□□ -1.97
SMC5-202ENST00000471372 RPS19BP1Q86WX3 136 aaKnown RBP2.77□□□□□ -1.97
SMC5-202ENST00000471372 TEX29Q8N6K0 151 aa2.77□□□□□ -1.97
SMC5-202ENST00000471372 Q8N814 137 aa2.77□□□□□ -1.97
SMC5-202ENST00000471372 C15orf53Q8NAA6 179 aa2.77□□□□□ -1.97
SMC5-202ENST00000471372 JPT1Q9UK76 154 aa2.77□□□□□ -1.97
SMC5-202ENST00000471372 RP1P56715 2156 aa2.77□□□□□ -1.97
SMC5-202ENST00000471372 BAZ2BQ9UIF8 2168 aaKnown RBP2.76□□□□□ -1.97
SMC5-202ENST00000471372 DEGS1O15121 323 aa2.76□□□□□ -1.97
SMC5-202ENST00000471372 MT-ND6P03923 174 aa2.76□□□□□ -1.97
SMC5-202ENST00000471372 RNASE3P12724 160 aaKnown RBP2.76□□□□□ -1.97
SMC5-202ENST00000471372 RAB4BP61018 213 aa2.76□□□□□ -1.97
SMC5-202ENST00000471372 LINC00305Q7Z4B0 112 aa2.76□□□□□ -1.97
SMC5-202ENST00000471372 TMEM229BQ8NBD8 167 aa2.76□□□□□ -1.97
SMC5-202ENST00000471372 TMEM254Q8TBM7 123 aa2.76□□□□□ -1.97
SMC5-202ENST00000471372 ARAP1Q96P48 1450 aa2.76□□□□□ -1.97
SMC5-202ENST00000471372 ANAPC1Q9H1A4 1944 aa2.76□□□□□ -1.97
SMC5-202ENST00000471372 ARHGEF10O15013 1369 aa2.75□□□□□ -1.97
SMC5-202ENST00000471372 M0R233 179 aa2.75□□□□□ -1.97
SMC5-202ENST00000471372 RAB5CP51148 216 aa2.75□□□□□ -1.97
SMC5-202ENST00000471372 NDUFA6P56556 154 aa2.75□□□□□ -1.97
SMC5-202ENST00000471372 KRTAP12-3P60328 96 aa2.75□□□□□ -1.97
SMC5-202ENST00000471372 Q8N2B8 174 aa2.75□□□□□ -1.97
SMC5-202ENST00000471372 OR5D14Q8NGL3 314 aa2.75□□□□□ -1.97
SMC5-202ENST00000471372 LXNQ9BS40 222 aa2.75□□□□□ -1.97
SMC5-202ENST00000471372 REG4Q9BYZ8 158 aa2.75□□□□□ -1.97
SMC5-202ENST00000471372 NIT2Q9NQR4 276 aa2.75□□□□□ -1.97
SMC5-202ENST00000471372 DOCK10Q96BY6 2186 aa2.75□□□□□ -1.97
SMC5-202ENST00000471372 BRWD1Q9NSI6 2320 aa2.75□□□□□ -1.97
SMC5-202ENST00000471372 TRPM1Q7Z4N2 1603 aa2.75□□□□□ -1.97
SMC5-202ENST00000471372 RTL9Q8NET4 1388 aa2.74□□□□□ -1.97
SMC5-202ENST00000471372 NUP210Q8TEM1 1887 aaPredicted RBP2.74□□□□□ -1.97
SMC5-202ENST00000471372 TRAV36DV7A0A075B6V5 113 aa2.74□□□□□ -1.97
SMC5-202ENST00000471372 LOC107984640A0A0U1RRK4 108 aa2.74□□□□□ -1.97
SMC5-202ENST00000471372 C17orf112F2Z3M2 114 aa2.74□□□□□ -1.97
SMC5-202ENST00000471372 FAM216BQ8N7L0 139 aa2.74□□□□□ -1.97
SMC5-202ENST00000471372 SPANXA1Q9NS26 97 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms