RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 DLX1P56177 255 aa3.41□□□□□ -1.86
CCDC39-202ENST00000471307 RPL30P62888 115 aaKnown RBP3.41□□□□□ -1.86
CCDC39-202ENST00000471307 KLRD1Q13241 179 aa3.41□□□□□ -1.86
CCDC39-202ENST00000471307 RTL8BQ17RB0 113 aa3.41□□□□□ -1.86
CCDC39-202ENST00000471307 SOHLH1Q5JUK2 328 aa3.41□□□□□ -1.86
CCDC39-202ENST00000471307 UFSP1Q6NVU6 142 aa3.41□□□□□ -1.86
CCDC39-202ENST00000471307 SPNS3Q6ZMD2 512 aa3.41□□□□□ -1.86
CCDC39-202ENST00000471307 PDPNQ86YL7 162 aa3.41□□□□□ -1.86
CCDC39-202ENST00000471307 SELENOHQ8IZQ5 122 aaKnown RBP3.41□□□□□ -1.86
CCDC39-202ENST00000471307 OR4C13Q8NGP0 309 aa3.41□□□□□ -1.86
CCDC39-202ENST00000471307 OR4S2Q8NH73 311 aa3.41□□□□□ -1.86
CCDC39-202ENST00000471307 LSM10Q969L4 123 aaKnown RBP3.41□□□□□ -1.86
CCDC39-202ENST00000471307 FLYWCH2Q96CP2 140 aaKnown RBP3.41□□□□□ -1.86
CCDC39-202ENST00000471307 OR2A7Q96R45 310 aa3.41□□□□□ -1.86
CCDC39-202ENST00000471307 HIST1H4GQ99525 98 aa3.41□□□□□ -1.86
CCDC39-202ENST00000471307 NABP2Q9BQ15 211 aa3.41□□□□□ -1.86
CCDC39-202ENST00000471307 MRPL20Q9BYC9 149 aaKnown RBP3.41□□□□□ -1.86
CCDC39-202ENST00000471307 SLC25A39Q9BZJ4 359 aaPredicted RBP3.41□□□□□ -1.86
CCDC39-202ENST00000471307 CHIAQ9BZP6 476 aa3.41□□□□□ -1.86
CCDC39-202ENST00000471307 COMMD9Q9P000 198 aa3.41□□□□□ -1.86
CCDC39-202ENST00000471307 ZNRD1Q9P1U0 126 aa3.41□□□□□ -1.86
CCDC39-202ENST00000471307 CACFD1Q9UGQ2 172 aa3.41□□□□□ -1.86
CCDC39-202ENST00000471307 WASHC3Q9Y3C0 194 aa3.41□□□□□ -1.86
CCDC39-202ENST00000471307 SETXQ7Z333 2677 aaKnown RBP3.41□□□□□ -1.86
CCDC39-202ENST00000471307 AKAP9Q99996 3911 aa3.41□□□□□ -1.86
CCDC39-202ENST00000471307 MXRA5Q9NR99 2828 aa3.41□□□□□ -1.86
CCDC39-202ENST00000471307 CELSR1Q9NYQ6 3014 aa3.41□□□□□ -1.86
CCDC39-202ENST00000471307 OTOGQ6ZRI0 2925 aa3.4□□□□□ -1.86
CCDC39-202ENST00000471307 TRAV40A0A0B4J280 105 aa3.4□□□□□ -1.87
CCDC39-202ENST00000471307 A0A1W2PRF3 423 aa3.4□□□□□ -1.87
CCDC39-202ENST00000471307 A0A1W2PRM7 423 aa3.4□□□□□ -1.87
CCDC39-202ENST00000471307 VGLL3A8MV65 326 aa3.4□□□□□ -1.87
CCDC39-202ENST00000471307 PFDN1O60925 122 aa3.4□□□□□ -1.87
CCDC39-202ENST00000471307 ADAP1O75689 374 aa3.4□□□□□ -1.87
CCDC39-202ENST00000471307 CCNKO75909 580 aa3.4□□□□□ -1.87
CCDC39-202ENST00000471307 TSPAN13O95857 204 aa3.4□□□□□ -1.87
CCDC39-202ENST00000471307 KRASP01116 189 aa3.4□□□□□ -1.87
CCDC39-202ENST00000471307 IGKV1-39P01597 117 aa3.4□□□□□ -1.87
CCDC39-202ENST00000471307 IGKV1D-39P04432 117 aa3.4□□□□□ -1.87
CCDC39-202ENST00000471307 FBP1P09467 338 aa3.4□□□□□ -1.87
CCDC39-202ENST00000471307 GIPP09681 153 aaPredicted RBP3.4□□□□□ -1.87
CCDC39-202ENST00000471307 NQO2P16083 231 aa3.4□□□□□ -1.87
CCDC39-202ENST00000471307 REG1BP48304 166 aa3.4□□□□□ -1.87
CCDC39-202ENST00000471307 DYNLT3P51808 116 aa3.4□□□□□ -1.87
CCDC39-202ENST00000471307 PRB3Q04118 309 aaPredicted RBP3.4□□□□□ -1.87
CCDC39-202ENST00000471307 COTL1Q14019 142 aa3.4□□□□□ -1.87
CCDC39-202ENST00000471307 EBI3Q14213 229 aa3.4□□□□□ -1.87
CCDC39-202ENST00000471307 DIAPH2-AS1Q14236 149 aa3.4□□□□□ -1.87
CCDC39-202ENST00000471307 AANATQ16613 207 aa3.4□□□□□ -1.87
CCDC39-202ENST00000471307 POU2AF1Q16633 256 aa3.4□□□□□ -1.87
CCDC39-202ENST00000471307 NMSQ5H8A3 153 aa3.4□□□□□ -1.87
CCDC39-202ENST00000471307 KLF17Q5JT82 389 aaPredicted RBP3.4□□□□□ -1.87
CCDC39-202ENST00000471307 LDLRAD2Q5SZI1 272 aa3.4□□□□□ -1.87
CCDC39-202ENST00000471307 LYZL2Q7Z4W2 148 aa3.4□□□□□ -1.87
CCDC39-202ENST00000471307 PDZD9Q8IXQ8 264 aa3.4□□□□□ -1.87
CCDC39-202ENST00000471307 SLC35G3Q8N808 338 aa3.4□□□□□ -1.87
CCDC39-202ENST00000471307 OR11H7Q8NGC8 314 aa3.4□□□□□ -1.87
CCDC39-202ENST00000471307 OR1S2Q8NGQ3 325 aa3.4□□□□□ -1.87
CCDC39-202ENST00000471307 OR2T10Q8NGZ9 312 aa3.4□□□□□ -1.87
CCDC39-202ENST00000471307 LHFPL5Q8TAF8 219 aa3.4□□□□□ -1.87
CCDC39-202ENST00000471307 VSTM2AQ8TAG5 236 aa3.4□□□□□ -1.87
CCDC39-202ENST00000471307 ZNF502Q8TBZ5 544 aa3.4□□□□□ -1.87
CCDC39-202ENST00000471307 ISOC2Q96AB3 205 aa3.4□□□□□ -1.87
CCDC39-202ENST00000471307 PPP1R14BQ96C90 147 aa3.4□□□□□ -1.87
CCDC39-202ENST00000471307 PGLYRP4Q96LB8 373 aa3.4□□□□□ -1.87
CCDC39-202ENST00000471307 C2orf50Q96LR7 162 aa3.4□□□□□ -1.87
CCDC39-202ENST00000471307 TSNAXQ99598 290 aaKnown RBP3.4□□□□□ -1.87
CCDC39-202ENST00000471307 SPIN2AQ99865 258 aa3.4□□□□□ -1.87
CCDC39-202ENST00000471307 SPIN2BQ9BPZ2 258 aa3.4□□□□□ -1.87
CCDC39-202ENST00000471307 NMES1Q9C002 83 aa3.4□□□□□ -1.87
CCDC39-202ENST00000471307 ZNF436Q9C0F3 470 aaPredicted RBP3.4□□□□□ -1.87
CCDC39-202ENST00000471307 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.4□□□□□ -1.87
CCDC39-202ENST00000471307 COA4Q9NYJ1 87 aa3.4□□□□□ -1.87
CCDC39-202ENST00000471307 HILPDAQ9Y5L2 63 aa3.4□□□□□ -1.87
CCDC39-202ENST00000471307 TNCP24821 2201 aa3.4□□□□□ -1.87
CCDC39-202ENST00000471307 HIVEP2P31629 2446 aa3.39□□□□□ -1.87
CCDC39-202ENST00000471307 SNAPC5O75971 98 aa3.39□□□□□ -1.87
CCDC39-202ENST00000471307 S1PR2O95136 353 aa3.39□□□□□ -1.87
CCDC39-202ENST00000471307 CRYZL1O95825 349 aa3.39□□□□□ -1.87
CCDC39-202ENST00000471307 MOSP00540 346 aa3.39□□□□□ -1.87
CCDC39-202ENST00000471307 IGKV1-5P01602 117 aa3.39□□□□□ -1.87
CCDC39-202ENST00000471307 RLN2P04090 185 aa3.39□□□□□ -1.87
CCDC39-202ENST00000471307 IGKV1-16P04430 117 aa3.39□□□□□ -1.87
CCDC39-202ENST00000471307 RBMY1CP0DJD4 496 aa3.39□□□□□ -1.87
CCDC39-202ENST00000471307 CD99P14209 185 aa3.39□□□□□ -1.87
CCDC39-202ENST00000471307 CXCL3P19876 107 aa3.39□□□□□ -1.87
CCDC39-202ENST00000471307 G6PCP35575 357 aa3.39□□□□□ -1.87
CCDC39-202ENST00000471307 AKR1C2P52895 323 aa3.39□□□□□ -1.87
CCDC39-202ENST00000471307 H2BFSP57053 126 aa3.39□□□□□ -1.87
CCDC39-202ENST00000471307 UBE2KP61086 200 aa3.39□□□□□ -1.87
CCDC39-202ENST00000471307 IL15RAQ13261 267 aa3.39□□□□□ -1.87
CCDC39-202ENST00000471307 SMCO1Q147U7 214 aa3.39□□□□□ -1.87
CCDC39-202ENST00000471307 IAH1Q2TAA2 248 aaPredicted RBP3.39□□□□□ -1.87
CCDC39-202ENST00000471307 VMA21Q3ZAQ7 101 aa3.39□□□□□ -1.87
CCDC39-202ENST00000471307 OR2B11Q5JQS5 317 aa3.39□□□□□ -1.87
CCDC39-202ENST00000471307 THOC7Q6I9Y2 204 aaKnown RBP3.39□□□□□ -1.87
CCDC39-202ENST00000471307 BRD3OSQ6XYD6 125 aa3.39□□□□□ -1.87
CCDC39-202ENST00000471307 AKAP14Q86UN6 197 aa3.39□□□□□ -1.87
CCDC39-202ENST00000471307 TCTE3Q8IZS6 198 aa3.39□□□□□ -1.87
CCDC39-202ENST00000471307 DYNAPQ8N1N2 210 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms