RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 C9orf139Q6ZV77 190 aa5.65□□□□□ -1.5
BRCA1-210ENST00000471181 PHIPQ8WWQ0 1821 aa5.65□□□□□ -1.51
BRCA1-210ENST00000471181 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.65□□□□□ -1.51
BRCA1-210ENST00000471181 MBD3L4A6NDZ8 208 aaPredicted RBP5.65□□□□□ -1.51
BRCA1-210ENST00000471181 MBD3L3A6NE82 208 aaPredicted RBP5.65□□□□□ -1.51
BRCA1-210ENST00000471181 MBD3L5A6NJ08 208 aaPredicted RBP5.65□□□□□ -1.51
BRCA1-210ENST00000471181 YPEL1O60688 119 aa5.65□□□□□ -1.51
BRCA1-210ENST00000471181 ANGP03950 147 aaKnown RBP5.65□□□□□ -1.51
BRCA1-210ENST00000471181 TIRAPP58753 221 aa5.65□□□□□ -1.51
BRCA1-210ENST00000471181 C10orf55Q5SWW7 151 aa5.65□□□□□ -1.51
BRCA1-210ENST00000471181 NUP35Q8NFH5 326 aa5.65□□□□□ -1.51
BRCA1-210ENST00000471181 MBD3L2Q8NHZ7 208 aaPredicted RBP5.65□□□□□ -1.51
BRCA1-210ENST00000471181 YPEL2Q96QA6 119 aa5.65□□□□□ -1.51
BRCA1-210ENST00000471181 PSPNO60542 156 aa5.65□□□□□ -1.51
BRCA1-210ENST00000471181 PROP1O75360 226 aa5.65□□□□□ -1.51
BRCA1-210ENST00000471181 DSCR9P59020 149 aa5.65□□□□□ -1.51
BRCA1-210ENST00000471181 FAM104BQ5XKR9 115 aa5.65□□□□□ -1.51
BRCA1-210ENST00000471181 RNF183Q96D59 192 aa5.65□□□□□ -1.51
BRCA1-210ENST00000471181 TM2D1Q9BX74 207 aa5.65□□□□□ -1.51
BRCA1-210ENST00000471181 IGHV2-26A0A0B4J1V2 119 aa5.64□□□□□ -1.51
BRCA1-210ENST00000471181 A0A1B0GX51 115 aa5.64□□□□□ -1.51
BRCA1-210ENST00000471181 I3L3M4 83 aa5.64□□□□□ -1.51
BRCA1-210ENST00000471181 HIST3H2BBQ8N257 126 aa5.64□□□□□ -1.51
BRCA1-210ENST00000471181 C9orf106Q8NAJ2 232 aa5.64□□□□□ -1.51
BRCA1-210ENST00000471181 BRK1Q8WUW1 75 aa5.64□□□□□ -1.51
BRCA1-210ENST00000471181 IGF2BP2-AS1Q96M15 143 aa5.64□□□□□ -1.51
BRCA1-210ENST00000471181 RHPN1-AS1Q9BWJ2 59 aa5.64□□□□□ -1.51
BRCA1-210ENST00000471181 SHROOM3Q8TF72 1996 aa5.64□□□□□ -1.51
BRCA1-210ENST00000471181 ETDCA0A1B0GVM5 59 aa5.64□□□□□ -1.51
BRCA1-210ENST00000471181 CXCL1P09341 107 aa5.64□□□□□ -1.51
BRCA1-210ENST00000471181 C3orf79P0CE67 100 aa5.64□□□□□ -1.51
BRCA1-210ENST00000471181 ZNRF2Q8NHG8 242 aa5.64□□□□□ -1.51
BRCA1-210ENST00000471181 IGKV1D-13A0A0B4J2D9 117 aa5.64□□□□□ -1.51
BRCA1-210ENST00000471181 IGKV1-39P01597 117 aa5.64□□□□□ -1.51
BRCA1-210ENST00000471181 IGKV1D-39P04432 117 aa5.64□□□□□ -1.51
BRCA1-210ENST00000471181 IGKV1-13P0DP09 117 aa5.64□□□□□ -1.51
BRCA1-210ENST00000471181 SLC25A45Q8N413 288 aa5.64□□□□□ -1.51
BRCA1-210ENST00000471181 TRAV13-2A0A0B4J235 113 aa5.64□□□□□ -1.51
BRCA1-210ENST00000471181 SAP25Q8TEE9 199 aa5.64□□□□□ -1.51
BRCA1-210ENST00000471181 ZMAT4Q9H898 229 aa5.64□□□□□ -1.51
BRCA1-210ENST00000471181 COLQQ9Y215 455 aaPredicted RBP5.64□□□□□ -1.51
BRCA1-210ENST00000471181 NINQ8N4C6 2090 aa5.64□□□□□ -1.51
BRCA1-210ENST00000471181 F6UB75 175 aa5.64□□□□□ -1.51
BRCA1-210ENST00000471181 FUSP35637 526 aaKnown RBP eCLIP5.64□□□□□ -1.51
BRCA1-210ENST00000471181 RNASE13Q5GAN3 156 aaKnown RBP5.64□□□□□ -1.51
BRCA1-210ENST00000471181 ZNF503Q96F45 646 aa5.64□□□□□ -1.51
BRCA1-210ENST00000471181 WFDC1Q9HC57 220 aa5.64□□□□□ -1.51
BRCA1-210ENST00000471181 C1orf194Q5T5A4 169 aa5.63□□□□□ -1.51
BRCA1-210ENST00000471181 TMEM141Q96I45 108 aa5.63□□□□□ -1.51
BRCA1-210ENST00000471181 Q71RC1 249 aaPredicted RBP5.63□□□□□ -1.51
BRCA1-210ENST00000471181 ZNFX1Q9P2E3 1918 aaKnown RBP5.63□□□□□ -1.51
BRCA1-210ENST00000471181 SPINK13Q1W4C9 94 aa5.63□□□□□ -1.51
BRCA1-210ENST00000471181 IL17RELQ6ZVW7 336 aa5.63□□□□□ -1.51
BRCA1-210ENST00000471181 MAP1BP46821 2468 aaKnown RBP5.63□□□□□ -1.51
BRCA1-210ENST00000471181 A0A0J9YY99 117 aa5.63□□□□□ -1.51
BRCA1-210ENST00000471181 GZMMP51124 257 aa5.63□□□□□ -1.51
BRCA1-210ENST00000471181 APOC4P55056 127 aa5.63□□□□□ -1.51
BRCA1-210ENST00000471181 CASC2Q6XLA1 102 aa5.63□□□□□ -1.51
BRCA1-210ENST00000471181 ZNF497Q6ZNH5 498 aa5.63□□□□□ -1.51
BRCA1-210ENST00000471181 ORMDL1Q9P0S3 153 aa5.63□□□□□ -1.51
BRCA1-210ENST00000471181 SIGLEC9Q9Y336 463 aa5.63□□□□□ -1.51
BRCA1-210ENST00000471181 TRBV6-7A0A0A0MS04 114 aa5.63□□□□□ -1.51
BRCA1-210ENST00000471181 IGHV1-3A0A0C4DH29 117 aa5.63□□□□□ -1.51
BRCA1-210ENST00000471181 IGKV1-8A0A0C4DH67 115 aa5.63□□□□□ -1.51
BRCA1-210ENST00000471181 FAM223BA6NKX1 122 aa5.63□□□□□ -1.51
BRCA1-210ENST00000471181 HLA-DRB4P13762 266 aa5.63□□□□□ -1.51
BRCA1-210ENST00000471181 Q6ZQT7 251 aa5.63□□□□□ -1.51
BRCA1-210ENST00000471181 C9orf47Q6ZRZ4 202 aa5.63□□□□□ -1.51
BRCA1-210ENST00000471181 FAM223AQ8IWN6 122 aa5.63□□□□□ -1.51
BRCA1-210ENST00000471181 HLA-DRB4X5D2U9 266 aa5.63□□□□□ -1.51
BRCA1-210ENST00000471181 TRAV26-2A0A0B4J265 109 aa5.62□□□□□ -1.51
BRCA1-210ENST00000471181 K7ERS5 55 aa5.62□□□□□ -1.51
BRCA1-210ENST00000471181 UBE2AP49459 152 aa5.62□□□□□ -1.51
BRCA1-210ENST00000471181 MUSTN1Q8IVN3 82 aa5.62□□□□□ -1.51
BRCA1-210ENST00000471181 C1QTNF5Q9BXJ0 243 aa5.62□□□□□ -1.51
BRCA1-210ENST00000471181 SPANXDQ9BXN6 97 aa5.62□□□□□ -1.51
BRCA1-210ENST00000471181 A0A1B0GWJ7 208 aa5.62□□□□□ -1.51
BRCA1-210ENST00000471181 OVOL3O00110 214 aa5.62□□□□□ -1.51
BRCA1-210ENST00000471181 IGLV2-23P01705 113 aa5.62□□□□□ -1.51
BRCA1-210ENST00000471181 ARMS2P0C7Q2 107 aa5.62□□□□□ -1.51
BRCA1-210ENST00000471181 XCL1P47992 114 aa5.62□□□□□ -1.51
BRCA1-210ENST00000471181 NDUFA12Q9UI09 145 aa5.62□□□□□ -1.51
BRCA1-210ENST00000471181 TRBV5-3A0A0A0MS03 114 aa5.62□□□□□ -1.51
BRCA1-210ENST00000471181 LINC01619G3V211 115 aa5.62□□□□□ -1.51
BRCA1-210ENST00000471181 TIAF1O95411 115 aa5.62□□□□□ -1.51
BRCA1-210ENST00000471181 HEPN1Q6WQI6 88 aa5.62□□□□□ -1.51
BRCA1-210ENST00000471181 C8orf49Q96NF6 230 aa5.62□□□□□ -1.51
BRCA1-210ENST00000471181 COL4A5P29400 1685 aa5.62□□□□□ -1.51
BRCA1-210ENST00000471181 RNF222A6NCQ9 220 aa5.62□□□□□ -1.51
BRCA1-210ENST00000471181 IGKV4-1P06312 121 aa5.62□□□□□ -1.51
BRCA1-210ENST00000471181 CFHR2P36980 270 aa5.62□□□□□ -1.51
BRCA1-210ENST00000471181 SLAQ13239 276 aa5.62□□□□□ -1.51
BRCA1-210ENST00000471181 TREML4Q6UXN2 200 aa5.62□□□□□ -1.51
BRCA1-210ENST00000471181 MRPL55Q7Z7F7 128 aaKnown RBP5.62□□□□□ -1.51
BRCA1-210ENST00000471181 OR11H6Q8NGC7 330 aa5.62□□□□□ -1.51
BRCA1-210ENST00000471181 IGFBPL1Q8WX77 278 aa5.62□□□□□ -1.51
BRCA1-210ENST00000471181 PARP14Q460N5 1801 aa5.62□□□□□ -1.51
BRCA1-210ENST00000471181 IGKV1D-43A0A0B4J1Z2 117 aa5.61□□□□□ -1.51
BRCA1-210ENST00000471181 TMEM200BQ69YZ2 307 aa5.61□□□□□ -1.51
BRCA1-210ENST00000471181 CFHR4Q92496 578 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms