RNA–Protein interactions for RNA: ENST00000470606.5

GTF3A-206, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 1,919 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-206ENST00000470606 FOXE3Q13461 319 aa6.38□□□□□ -1.39
GTF3A-206ENST00000470606 CST9LP1Q5W188 147 aa6.38□□□□□ -1.39
GTF3A-206ENST00000470606 TEX38Q6PEX7 206 aa6.38□□□□□ -1.39
GTF3A-206ENST00000470606 KLHDC1Q8N7A1 406 aa6.38□□□□□ -1.39
GTF3A-206ENST00000470606 ATP6V0BQ99437 205 aa6.38□□□□□ -1.39
GTF3A-206ENST00000470606 SMAD5-AS1Q9Y6J3 95 aa6.38□□□□□ -1.39
GTF3A-206ENST00000470606 TRBV20OR9-2A0A075B6H5 130 aa6.38□□□□□ -1.39
GTF3A-206ENST00000470606 IGHV3-49A0A0A0MS15 119 aa6.38□□□□□ -1.39
GTF3A-206ENST00000470606 SCO2A0A1W2PP80 73 aa6.38□□□□□ -1.39
GTF3A-206ENST00000470606 TMEM89A2RUT3 159 aa6.38□□□□□ -1.39
GTF3A-206ENST00000470606 SLC17A3O00476 420 aa6.38□□□□□ -1.39
GTF3A-206ENST00000470606 FABP1P07148 127 aa6.38□□□□□ -1.39
GTF3A-206ENST00000470606 SOHLH1Q5JUK2 328 aa6.38□□□□□ -1.39
GTF3A-206ENST00000470606 TMEM167BQ9NRX6 74 aa6.38□□□□□ -1.39
GTF3A-206ENST00000470606 FBN1P35555 2871 aaKnown RBP6.38□□□□□ -1.39
GTF3A-206ENST00000470606 IGHV3-66A0A0C4DH42 116 aa6.37□□□□□ -1.39
GTF3A-206ENST00000470606 A0A0G2JLM5 398 aa6.37□□□□□ -1.39
GTF3A-206ENST00000470606 BUB3O43684 328 aa6.37□□□□□ -1.39
GTF3A-206ENST00000470606 IFNA1P01562 189 aa6.37□□□□□ -1.39
GTF3A-206ENST00000470606 ELANEP08246 267 aa6.37□□□□□ -1.39
GTF3A-206ENST00000470606 NBEAP1P0C6P0 100 aa6.37□□□□□ -1.39
GTF3A-206ENST00000470606 LINC01006Q8NI28 216 aa6.37□□□□□ -1.39
GTF3A-206ENST00000470606 BLNKQ8WV28 456 aa6.37□□□□□ -1.39
GTF3A-206ENST00000470606 ELOVL1Q9BW60 279 aa6.37□□□□□ -1.39
GTF3A-206ENST00000470606 GAR1Q9NY12 217 aaKnown RBP6.37□□□□□ -1.39
GTF3A-206ENST00000470606 TMEM14CQ9P0S9 112 aa6.37□□□□□ -1.39
GTF3A-206ENST00000470606 U3KQE9 123 aa6.37□□□□□ -1.39
GTF3A-206ENST00000470606 TMEM250H0YL14 139 aa6.37□□□□□ -1.39
GTF3A-206ENST00000470606 CRYBB3P26998 211 aa6.37□□□□□ -1.39
GTF3A-206ENST00000470606 RANP62826 216 aaKnown RBP6.37□□□□□ -1.39
GTF3A-206ENST00000470606 SUMO1P63165 101 aaKnown RBP6.37□□□□□ -1.39
GTF3A-206ENST00000470606 DEFB136Q30KP8 78 aa6.37□□□□□ -1.39
GTF3A-206ENST00000470606 ZNF418Q8TF45 676 aaPredicted RBP6.37□□□□□ -1.39
GTF3A-206ENST00000470606 RPUSD4Q96CM3 377 aaKnown RBP6.37□□□□□ -1.39
GTF3A-206ENST00000470606 C20orf24Q9BUV8 137 aa6.37□□□□□ -1.39
GTF3A-206ENST00000470606 PARLQ9H300 379 aa6.37□□□□□ -1.39
GTF3A-206ENST00000470606 PEF1Q9UBV8 284 aaKnown RBP6.37□□□□□ -1.39
GTF3A-206ENST00000470606 SELENOKQ9Y6D0 94 aa6.37□□□□□ -1.39
GTF3A-206ENST00000470606 NOTCH3Q9UM47 2321 aa6.36□□□□□ -1.39
GTF3A-206ENST00000470606 TRRAPQ9Y4A5 3859 aa6.36□□□□□ -1.39
GTF3A-206ENST00000470606 IGHV4OR15-8A0A075B7B6 117 aa6.36□□□□□ -1.39
GTF3A-206ENST00000470606 A0A087WW49 117 aa6.36□□□□□ -1.39
GTF3A-206ENST00000470606 A0A1W2PRE2 83 aa6.36□□□□□ -1.39
GTF3A-206ENST00000470606 PGPEP1LA6NFU8 196 aa6.36□□□□□ -1.39
GTF3A-206ENST00000470606 AKR1C3P42330 323 aa6.36□□□□□ -1.39
GTF3A-206ENST00000470606 SLC35B1P78383 322 aa6.36□□□□□ -1.39
GTF3A-206ENST00000470606 RELQ04864 619 aaPredicted RBP6.36□□□□□ -1.39
GTF3A-206ENST00000470606 C11orf44Q8N8P7 122 aa6.36□□□□□ -1.39
GTF3A-206ENST00000470606 UBE2E2Q96LR5 201 aa6.36□□□□□ -1.39
GTF3A-206ENST00000470606 LINC00479Q96M42 142 aa6.36□□□□□ -1.39
GTF3A-206ENST00000470606 RABAC1Q9UI14 185 aa6.36□□□□□ -1.39
GTF3A-206ENST00000470606 STAB1Q9NY15 2570 aa6.36□□□□□ -1.39
GTF3A-206ENST00000470606 TRBV19A0A075B6N1 114 aa6.35□□□□□ -1.39
GTF3A-206ENST00000470606 NDUFA4O00483 81 aa6.35□□□□□ -1.39
GTF3A-206ENST00000470606 CRLF1O75462 422 aa6.35□□□□□ -1.39
GTF3A-206ENST00000470606 LGALS1P09382 135 aaKnown RBP6.35□□□□□ -1.39
GTF3A-206ENST00000470606 HIST1H1EP10412 219 aaKnown RBP6.35□□□□□ -1.39
GTF3A-206ENST00000470606 TAGLN2P37802 199 aaKnown RBP6.35□□□□□ -1.39
GTF3A-206ENST00000470606 GNG5P63218 68 aa6.35□□□□□ -1.39
GTF3A-206ENST00000470606 ZNF674Q2M3X9 581 aa6.35□□□□□ -1.39
GTF3A-206ENST00000470606 TM4SF20Q53R12 229 aa6.35□□□□□ -1.39
GTF3A-206ENST00000470606 EXOC3-AS1Q8N2X6 119 aa6.35□□□□□ -1.39
GTF3A-206ENST00000470606 CLRN3Q8NCR9 226 aa6.35□□□□□ -1.39
GTF3A-206ENST00000470606 STXBP6Q8NFX7 210 aa6.35□□□□□ -1.39
GTF3A-206ENST00000470606 C2CD4CQ8TF44 421 aa6.35□□□□□ -1.39
GTF3A-206ENST00000470606 TMEM190Q8WZ59 177 aa6.35□□□□□ -1.39
GTF3A-206ENST00000470606 C11orf52Q96A22 123 aa6.35□□□□□ -1.39
GTF3A-206ENST00000470606 DUX3Q96PT4 197 aa6.35□□□□□ -1.39
GTF3A-206ENST00000470606 C16orf95Q9H693 158 aa6.35□□□□□ -1.39
GTF3A-206ENST00000470606 AURKAIP1Q9NWT8 199 aaPredicted RBP6.35□□□□□ -1.39
GTF3A-206ENST00000470606 ARL2-SNX15V9GYD0 113 aa6.35□□□□□ -1.39
GTF3A-206ENST00000470606 PDE6DO43924 150 aa6.35□□□□□ -1.39
GTF3A-206ENST00000470606 GGCTO75223 188 aaKnown RBP6.35□□□□□ -1.39
GTF3A-206ENST00000470606 CD28P10747 220 aa6.35□□□□□ -1.39
GTF3A-206ENST00000470606 FAM74A3Q4VXF1 159 aa6.35□□□□□ -1.39
GTF3A-206ENST00000470606 AWAT1Q58HT5 328 aa6.35□□□□□ -1.39
GTF3A-206ENST00000470606 IGFL4Q6B9Z1 124 aa6.35□□□□□ -1.39
GTF3A-206ENST00000470606 SIGLEC15Q6ZMC9 328 aa6.35□□□□□ -1.39
GTF3A-206ENST00000470606 BPIFA4PQ86YQ2 179 aa6.35□□□□□ -1.39
GTF3A-206ENST00000470606 SVBPQ8N300 66 aa6.35□□□□□ -1.39
GTF3A-206ENST00000470606 SMIM7Q9BQ49 75 aa6.35□□□□□ -1.39
GTF3A-206ENST00000470606 Q9H3A6 140 aa6.35□□□□□ -1.39
GTF3A-206ENST00000470606 ZNF320A2RRD8 509 aa6.34□□□□□ -1.39
GTF3A-206ENST00000470606 PGPA6NDG6 321 aa6.34□□□□□ -1.39
GTF3A-206ENST00000470606 ZNF727A8MUV8 499 aa6.34□□□□□ -1.39
GTF3A-206ENST00000470606 NDUFS6O75380 124 aaKnown RBP6.34□□□□□ -1.39
GTF3A-206ENST00000470606 SCGB2A1O75556 95 aa6.34□□□□□ -1.39
GTF3A-206ENST00000470606 CDX1P47902 265 aaPredicted RBP6.34□□□□□ -1.39
GTF3A-206ENST00000470606 KRTAP10-3P60369 221 aa6.34□□□□□ -1.39
GTF3A-206ENST00000470606 SCGB2A2Q13296 93 aa6.34□□□□□ -1.39
GTF3A-206ENST00000470606 FAM209BQ5JX69 171 aa6.34□□□□□ -1.39
GTF3A-206ENST00000470606 GPHB5Q86YW7 130 aa6.34□□□□□ -1.39
GTF3A-206ENST00000470606 OR8I2Q8N0Y5 310 aa6.34□□□□□ -1.39
GTF3A-206ENST00000470606 TXNDC17Q9BRA2 123 aa6.34□□□□□ -1.39
GTF3A-206ENST00000470606 NKX6-2Q9C056 277 aaPredicted RBP6.34□□□□□ -1.39
GTF3A-206ENST00000470606 SDF2L1Q9HCN8 221 aa6.34□□□□□ -1.39
GTF3A-206ENST00000470606 TRAV34A0A0B4J273 112 aa6.33□□□□□ -1.4
GTF3A-206ENST00000470606 TMEM213A2RRL7 107 aa6.33□□□□□ -1.4
GTF3A-206ENST00000470606 C7orf77A4D0Y5 90 aa6.33□□□□□ -1.4
GTF3A-206ENST00000470606 F6UZH7 168 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms