RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 KDM5CP41229 1560 aa2.51□□□□□ -2.01
COL11A1-208ENST00000470170 CPS1P31327 1500 aa2.51□□□□□ -2.01
COL11A1-208ENST00000470170 STRCQ7RTU9 1775 aa2.51□□□□□ -2.01
COL11A1-208ENST00000470170 NSD3Q9BZ95 1437 aa2.51□□□□□ -2.01
COL11A1-208ENST00000470170 PREX1Q8TCU6 1659 aa2.5□□□□□ -2.01
COL11A1-208ENST00000470170 FAM236AA0A1B0GUQ0 79 aa2.5□□□□□ -2.01
COL11A1-208ENST00000470170 FAM236BA0A1B0GV22 79 aa2.5□□□□□ -2.01
COL11A1-208ENST00000470170 C7orf71A4D174 169 aa2.5□□□□□ -2.01
COL11A1-208ENST00000470170 CD28P10747 220 aa2.5□□□□□ -2.01
COL11A1-208ENST00000470170 SLC25A16P16260 332 aa2.5□□□□□ -2.01
COL11A1-208ENST00000470170 BRS3P32247 399 aa2.5□□□□□ -2.01
COL11A1-208ENST00000470170 TMEM155Q4W5P6 130 aa2.5□□□□□ -2.01
COL11A1-208ENST00000470170 LINC01545Q5VT33 79 aa2.5□□□□□ -2.01
COL11A1-208ENST00000470170 ZNF322Q6U7Q0 402 aaPredicted RBP2.5□□□□□ -2.01
COL11A1-208ENST00000470170 ZNF705AQ6ZN79 300 aaPredicted RBP2.5□□□□□ -2.01
COL11A1-208ENST00000470170 Q6ZR03 302 aa2.5□□□□□ -2.01
COL11A1-208ENST00000470170 OR10P1Q8NGE3 313 aa2.5□□□□□ -2.01
COL11A1-208ENST00000470170 OR4B1Q8NGF8 309 aa2.5□□□□□ -2.01
COL11A1-208ENST00000470170 DPH3Q96FX2 82 aa2.5□□□□□ -2.01
COL11A1-208ENST00000470170 ZC2HC1AQ96GY0 325 aa2.5□□□□□ -2.01
COL11A1-208ENST00000470170 SCGB3A1Q96QR1 104 aa2.5□□□□□ -2.01
COL11A1-208ENST00000470170 NAA38Q9BRA0 125 aaKnown RBP2.5□□□□□ -2.01
COL11A1-208ENST00000470170 PLA2G12AQ9BZM1 189 aa2.5□□□□□ -2.01
COL11A1-208ENST00000470170 NAA60Q9H7X0 242 aa2.5□□□□□ -2.01
COL11A1-208ENST00000470170 SAR1AQ9NR31 198 aa2.5□□□□□ -2.01
COL11A1-208ENST00000470170 EPDR1Q9UM22 224 aa2.5□□□□□ -2.01
COL11A1-208ENST00000470170 TRAPPC1Q9Y5R8 145 aa2.5□□□□□ -2.01
COL11A1-208ENST00000470170 LRRC7Q96NW7 1537 aa2.5□□□□□ -2.01
COL11A1-208ENST00000470170 ADAMTSL1Q8N6G6 1762 aa2.5□□□□□ -2.01
COL11A1-208ENST00000470170 TRIP11Q15643 1979 aa2.5□□□□□ -2.01
COL11A1-208ENST00000470170 DICER1Q9UPY3 1922 aaKnown RBP2.5□□□□□ -2.01
COL11A1-208ENST00000470170 CUX1P39880 1505 aa2.49□□□□□ -2.01
COL11A1-208ENST00000470170 BCORL1Q5H9F3 1711 aa2.49□□□□□ -2.01
COL11A1-208ENST00000470170 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.49□□□□□ -2.01
COL11A1-208ENST00000470170 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.49□□□□□ -2.01
COL11A1-208ENST00000470170 IGKV1-9A0A0C4DH69 117 aa2.49□□□□□ -2.01
COL11A1-208ENST00000470170 A0A0D9SG52 128 aa2.49□□□□□ -2.01
COL11A1-208ENST00000470170 SPAARA0A1B0GVQ0 90 aa2.49□□□□□ -2.01
COL11A1-208ENST00000470170 A6NED7 52 aa2.49□□□□□ -2.01
COL11A1-208ENST00000470170 C17orf51A8MQB3 221 aa2.49□□□□□ -2.01
COL11A1-208ENST00000470170 SLC25A20O43772 301 aa2.49□□□□□ -2.01
COL11A1-208ENST00000470170 SH2D1AO60880 128 aa2.49□□□□□ -2.01
COL11A1-208ENST00000470170 IGHV1-69P01742 117 aa2.49□□□□□ -2.01
COL11A1-208ENST00000470170 MT-ND6P03923 174 aa2.49□□□□□ -2.01
COL11A1-208ENST00000470170 CD14P08571 375 aa2.49□□□□□ -2.01
COL11A1-208ENST00000470170 HLA-DMBP28068 263 aa2.49□□□□□ -2.01
COL11A1-208ENST00000470170 KRTAP12-4P60329 112 aa2.49□□□□□ -2.01
COL11A1-208ENST00000470170 DIAPH2-AS1Q14236 149 aa2.49□□□□□ -2.01
COL11A1-208ENST00000470170 TMEM91Q6ZNR0 172 aa2.49□□□□□ -2.01
COL11A1-208ENST00000470170 TEN1Q86WV5 123 aa2.49□□□□□ -2.01
COL11A1-208ENST00000470170 SVBPQ8N300 66 aa2.49□□□□□ -2.01
COL11A1-208ENST00000470170 C15orf56Q8N910 161 aa2.49□□□□□ -2.01
COL11A1-208ENST00000470170 Q8N976 141 aa2.49□□□□□ -2.01
COL11A1-208ENST00000470170 MORN4Q8NDC4 146 aa2.49□□□□□ -2.01
COL11A1-208ENST00000470170 BPIFB6Q8NFQ5 453 aa2.49□□□□□ -2.01
COL11A1-208ENST00000470170 LINC01560Q8TB33 94 aa2.49□□□□□ -2.01
COL11A1-208ENST00000470170 WFDC5Q8TCV5 224 aa2.49□□□□□ -2.01
COL11A1-208ENST00000470170 C11orf1Q9H5F2 150 aa2.49□□□□□ -2.01
COL11A1-208ENST00000470170 COMMD3Q9UBI1 195 aa2.49□□□□□ -2.01
COL11A1-208ENST00000470170 CCDC18Q5T9S5 1454 aa2.49□□□□□ -2.01
COL11A1-208ENST00000470170 MBD5Q9P267 1494 aa2.49□□□□□ -2.01
COL11A1-208ENST00000470170 CEP350Q5VT06 3117 aa2.49□□□□□ -2.01
COL11A1-208ENST00000470170 NUP210Q8TEM1 1887 aaPredicted RBP2.49□□□□□ -2.01
COL11A1-208ENST00000470170 KIAA1107Q9UPP5 1409 aa2.49□□□□□ -2.01
COL11A1-208ENST00000470170 ABCC8Q09428 1581 aa2.49□□□□□ -2.01
COL11A1-208ENST00000470170 CEP170Q5SW79 1584 aa2.49□□□□□ -2.01
COL11A1-208ENST00000470170 LOXHD1Q8IVV2 1947 aa2.48□□□□□ -2.01
COL11A1-208ENST00000470170 RALGAPA2Q2PPJ7 1873 aa2.48□□□□□ -2.01
COL11A1-208ENST00000470170 MYOM2P54296 1465 aa2.48□□□□□ -2.01
COL11A1-208ENST00000470170 TRBV24-1A0A075B6N3 115 aa2.48□□□□□ -2.01
COL11A1-208ENST00000470170 CCDC179H3BU77 68 aa2.48□□□□□ -2.01
COL11A1-208ENST00000470170 YPEL1O60688 119 aa2.48□□□□□ -2.01
COL11A1-208ENST00000470170 TCL1BO95988 128 aa2.48□□□□□ -2.01
COL11A1-208ENST00000470170 IGHV3-7P01780 117 aa2.48□□□□□ -2.01
COL11A1-208ENST00000470170 PMP2P02689 132 aa2.48□□□□□ -2.01
COL11A1-208ENST00000470170 SLC25A5P05141 298 aaKnown RBP2.48□□□□□ -2.01
COL11A1-208ENST00000470170 SPINK8P0C7L1 97 aa2.48□□□□□ -2.01
COL11A1-208ENST00000470170 TLX1NBP0CAT3 122 aa2.48□□□□□ -2.01
COL11A1-208ENST00000470170 IFITM1P13164 125 aa2.48□□□□□ -2.01
COL11A1-208ENST00000470170 RNASE4P34096 147 aaKnown RBP2.48□□□□□ -2.01
COL11A1-208ENST00000470170 MRPS36P82909 103 aaKnown RBP2.48□□□□□ -2.01
COL11A1-208ENST00000470170 SYCNQ0VAF6 134 aa2.48□□□□□ -2.01
COL11A1-208ENST00000470170 CATR1Q13166 79 aa2.48□□□□□ -2.01
COL11A1-208ENST00000470170 UBE2SQ16763 222 aa2.48□□□□□ -2.01
COL11A1-208ENST00000470170 C10orf91Q5T1B1 145 aa2.48□□□□□ -2.01
COL11A1-208ENST00000470170 NOXRED1Q6NXP6 359 aa2.48□□□□□ -2.01
COL11A1-208ENST00000470170 C16orf47Q6ZP98 133 aaPredicted RBP2.48□□□□□ -2.01
COL11A1-208ENST00000470170 NTM-AS1Q6ZSK4 140 aa2.48□□□□□ -2.01
COL11A1-208ENST00000470170 TTC9CQ8N5M4 171 aa2.48□□□□□ -2.01
COL11A1-208ENST00000470170 LINC00311Q8N616 119 aa2.48□□□□□ -2.01
COL11A1-208ENST00000470170 CNEP1R1Q8N9A8 125 aa2.48□□□□□ -2.01
COL11A1-208ENST00000470170 C5orf17Q8NAS9 161 aa2.48□□□□□ -2.01
COL11A1-208ENST00000470170 ZNF222Q9UK12 451 aa2.48□□□□□ -2.01
COL11A1-208ENST00000470170 LINC00588Q9Y4M8 146 aa2.48□□□□□ -2.01
COL11A1-208ENST00000470170 RGS12O14924 1447 aa2.48□□□□□ -2.01
COL11A1-208ENST00000470170 PKD1L2Q7Z442 2459 aa2.48□□□□□ -2.01
COL11A1-208ENST00000470170 EPRSP07814 1512 aaKnown RBP2.47□□□□□ -2.01
COL11A1-208ENST00000470170 PZPP20742 1482 aa2.47□□□□□ -2.01
COL11A1-208ENST00000470170 TRAV12-2A0A075B6T6 113 aa2.47□□□□□ -2.01
COL11A1-208ENST00000470170 RER1O15258 196 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms