RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 ZNF479Q96JC4 524 aa7.11□□□□□ -1.27
HPS4-209ENST00000466781 MBD3L4A6NDZ8 208 aaPredicted RBP7.11□□□□□ -1.27
HPS4-209ENST00000466781 MBD3L3A6NE82 208 aaPredicted RBP7.11□□□□□ -1.27
HPS4-209ENST00000466781 MBD3L5A6NJ08 208 aaPredicted RBP7.11□□□□□ -1.27
HPS4-209ENST00000466781 COL8A2P25067 703 aa7.11□□□□□ -1.27
HPS4-209ENST00000466781 SAA4P35542 130 aa7.11□□□□□ -1.27
HPS4-209ENST00000466781 DEFB131AP59861 70 aa7.11□□□□□ -1.27
HPS4-209ENST00000466781 CFHR3Q02985 330 aa7.11□□□□□ -1.27
HPS4-209ENST00000466781 MBD3L2Q8NHZ7 208 aaPredicted RBP7.11□□□□□ -1.27
HPS4-209ENST00000466781 NABP1Q96AH0 204 aa7.11□□□□□ -1.27
HPS4-209ENST00000466781 F5P12259 2224 aa7.11□□□□□ -1.27
HPS4-209ENST00000466781 LAMTOR2Q9Y2Q5 125 aa7.11□□□□□ -1.27
HPS4-209ENST00000466781 IGHG3P01860 377 aa7.1□□□□□ -1.27
HPS4-209ENST00000466781 TREML4Q6UXN2 200 aa7.1□□□□□ -1.27
HPS4-209ENST00000466781 CNTRLQ7Z7A1 2325 aa7.1□□□□□ -1.27
HPS4-209ENST00000466781 IGKV1-9A0A0C4DH69 117 aa7.1□□□□□ -1.27
HPS4-209ENST00000466781 CRYGSP22914 178 aa7.1□□□□□ -1.27
HPS4-209ENST00000466781 SNHG12Q9BXW3 62 aa7.1□□□□□ -1.27
HPS4-209ENST00000466781 WDR81Q562E7 1941 aa7.1□□□□□ -1.27
HPS4-209ENST00000466781 RP1L1Q8IWN7 2480 aaPredicted RBP7.1□□□□□ -1.27
HPS4-209ENST00000466781 SAMD5Q5TGI4 173 aa7.1□□□□□ -1.27
HPS4-209ENST00000466781 SUMO4Q6EEV6 95 aa7.1□□□□□ -1.27
HPS4-209ENST00000466781 TIMM21Q9BVV7 248 aa7.1□□□□□ -1.27
HPS4-209ENST00000466781 MEGF9Q9H1U4 602 aa7.1□□□□□ -1.27
HPS4-209ENST00000466781 WDR83OSQ9Y284 106 aa7.1□□□□□ -1.27
HPS4-209ENST00000466781 FAM90A2PQ658T7 463 aa7.1□□□□□ -1.27
HPS4-209ENST00000466781 ZNF114Q8NC26 417 aa7.1□□□□□ -1.27
HPS4-209ENST00000466781 A0A087WWL8 130 aa7.1□□□□□ -1.27
HPS4-209ENST00000466781 FOXG1P55316 489 aaPredicted RBP7.1□□□□□ -1.27
HPS4-209ENST00000466781 SPATA31B1PQ5VZV4 182 aa7.1□□□□□ -1.27
HPS4-209ENST00000466781 TRPT1Q86TN4 253 aaKnown RBP7.1□□□□□ -1.27
HPS4-209ENST00000466781 PAQR4Q8N4S7 273 aaPredicted RBP7.1□□□□□ -1.27
HPS4-209ENST00000466781 C14orf178Q8N769 122 aaPredicted RBP7.1□□□□□ -1.27
HPS4-209ENST00000466781 THAP8Q8NA92 274 aa7.1□□□□□ -1.27
HPS4-209ENST00000466781 BRCA2P51587 3418 aa7.1□□□□□ -1.27
HPS4-209ENST00000466781 TRBV25-1A0A075B6N4 114 aa7.09□□□□□ -1.27
HPS4-209ENST00000466781 A0A0A6YYD4 124 aa7.09□□□□□ -1.27
HPS4-209ENST00000466781 RNF222A6NCQ9 220 aa7.09□□□□□ -1.27
HPS4-209ENST00000466781 A8MXK9 166 aa7.09□□□□□ -1.27
HPS4-209ENST00000466781 LINC00518Q8N0U6 118 aa7.09□□□□□ -1.27
HPS4-209ENST00000466781 Q8TAT8 98 aa7.09□□□□□ -1.27
HPS4-209ENST00000466781 GGTLC1Q9BX51 225 aa7.09□□□□□ -1.27
HPS4-209ENST00000466781 COL4A4P53420 1690 aaPredicted RBP7.09□□□□□ -1.27
HPS4-209ENST00000466781 GAGE13Q4V321 117 aa7.09□□□□□ -1.27
HPS4-209ENST00000466781 PRIMA1Q86XR5 153 aa7.09□□□□□ -1.27
HPS4-209ENST00000466781 ZNF625Q96I27 306 aaPredicted RBP7.09□□□□□ -1.27
HPS4-209ENST00000466781 MGST2Q99735 147 aa7.09□□□□□ -1.27
HPS4-209ENST00000466781 OVOL3O00110 214 aa7.09□□□□□ -1.27
HPS4-209ENST00000466781 KLF17Q5JT82 389 aaPredicted RBP7.09□□□□□ -1.27
HPS4-209ENST00000466781 IGFL3Q6UXB1 125 aa7.09□□□□□ -1.27
HPS4-209ENST00000466781 LAIR2Q6ISS4 152 aa7.09□□□□□ -1.27
HPS4-209ENST00000466781 Q71RC1 249 aaPredicted RBP7.09□□□□□ -1.27
HPS4-209ENST00000466781 SIGLEC9Q9Y336 463 aa7.09□□□□□ -1.27
HPS4-209ENST00000466781 UNC13CQ8NB66 2214 aa7.09□□□□□ -1.27
HPS4-209ENST00000466781 C22orf46C9J442 243 aa7.09□□□□□ -1.28
HPS4-209ENST00000466781 SSBP2P81877 361 aaPredicted RBP7.09□□□□□ -1.28
HPS4-209ENST00000466781 IGFL4Q6B9Z1 124 aa7.09□□□□□ -1.28
HPS4-209ENST00000466781 C2orf82Q6UX34 121 aa7.09□□□□□ -1.28
HPS4-209ENST00000466781 FBLN5Q9UBX5 448 aa7.09□□□□□ -1.28
HPS4-209ENST00000466781 NUP214P35658 2090 aaPredicted RBP7.08□□□□□ -1.28
HPS4-209ENST00000466781 GAGE12JA6NER3 117 aa7.08□□□□□ -1.28
HPS4-209ENST00000466781 A6NNC1 897 aa7.08□□□□□ -1.28
HPS4-209ENST00000466781 GAGE1Q13065 139 aa7.08□□□□□ -1.28
HPS4-209ENST00000466781 GAGE4Q13068 117 aa7.08□□□□□ -1.28
HPS4-209ENST00000466781 GAGE5Q13069 117 aa7.08□□□□□ -1.28
HPS4-209ENST00000466781 MAPK1IP1LQ8NDC0 245 aa7.08□□□□□ -1.28
HPS4-209ENST00000466781 KLHDC3Q9BQ90 382 aa7.08□□□□□ -1.28
HPS4-209ENST00000466781 VSIRQ9H7M9 311 aa7.08□□□□□ -1.28
HPS4-209ENST00000466781 RFNGQ9Y644 331 aa7.08□□□□□ -1.28
HPS4-209ENST00000466781 SHISA3A0PJX4 238 aa7.08□□□□□ -1.28
HPS4-209ENST00000466781 EFNA2O43921 213 aa7.08□□□□□ -1.28
HPS4-209ENST00000466781 MAP1BP46821 2468 aaKnown RBP7.08□□□□□ -1.28
HPS4-209ENST00000466781 TNFRSF6BO95407 300 aa7.08□□□□□ -1.28
HPS4-209ENST00000466781 LYPD2Q6UXB3 125 aa7.08□□□□□ -1.28
HPS4-209ENST00000466781 LYPD1Q8N2G4 141 aa7.08□□□□□ -1.28
HPS4-209ENST00000466781 LY6G5BQ8NDX9 201 aa7.08□□□□□ -1.28
HPS4-209ENST00000466781 XCL2Q9UBD3 114 aa7.08□□□□□ -1.28
HPS4-209ENST00000466781 ABCA7Q8IZY2 2146 aa7.08□□□□□ -1.28
HPS4-209ENST00000466781 LYPD3O95274 346 aa7.08□□□□□ -1.28
HPS4-209ENST00000466781 AZU1P20160 251 aa7.08□□□□□ -1.28
HPS4-209ENST00000466781 SRSF8Q9BRL6 282 aaKnown RBP7.08□□□□□ -1.28
HPS4-209ENST00000466781 RNF126Q9BV68 326 aa7.08□□□□□ -1.28
HPS4-209ENST00000466781 ZNF319Q9P2F9 582 aa7.08□□□□□ -1.28
HPS4-209ENST00000466781 HELZP42694 1942 aaKnown RBP7.08□□□□□ -1.28
HPS4-209ENST00000466781 PCP4P48539 62 aa7.08□□□□□ -1.28
HPS4-209ENST00000466781 WFDC1Q9HC57 220 aa7.08□□□□□ -1.28
HPS4-209ENST00000466781 F8VVB4 439 aa7.07□□□□□ -1.28
HPS4-209ENST00000466781 F8VWA3 439 aa7.07□□□□□ -1.28
HPS4-209ENST00000466781 PRTN3P24158 256 aa7.07□□□□□ -1.28
HPS4-209ENST00000466781 IL17RELQ6ZVW7 336 aa7.07□□□□□ -1.28
HPS4-209ENST00000466781 NINQ8N4C6 2090 aa7.07□□□□□ -1.28
HPS4-209ENST00000466781 TRAV8-3A0A0A6YYJ7 113 aa7.07□□□□□ -1.28
HPS4-209ENST00000466781 ID3Q02535 119 aa7.07□□□□□ -1.28
HPS4-209ENST00000466781 SPXQ9BT56 116 aa7.07□□□□□ -1.28
HPS4-209ENST00000466781 CACNA1GO43497 2377 aa7.07□□□□□ -1.28
HPS4-209ENST00000466781 TRAV3A0A0B4J244 114 aa7.07□□□□□ -1.28
HPS4-209ENST00000466781 E7EQL1 145 aa7.07□□□□□ -1.28
HPS4-209ENST00000466781 GAS1P54826 345 aa7.07□□□□□ -1.28
HPS4-209ENST00000466781 MST1LQ2TV78 715 aa7.07□□□□□ -1.28
HPS4-209ENST00000466781 IGHV1-69DA0A0B4J2H0 117 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms