RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 TRAV20A0A0B4J274 112 aa9.96□□□□□ -0.81
VAPB-203ENST00000463370 ZNF320A2RRD8 509 aa9.96□□□□□ -0.81
VAPB-203ENST00000463370 IFITM10A6NMD0 228 aa9.96□□□□□ -0.81
VAPB-203ENST00000463370 CA1P00915 261 aaPredicted RBP9.96□□□□□ -0.81
VAPB-203ENST00000463370 TYMSP04818 313 aa9.96□□□□□ -0.81
VAPB-203ENST00000463370 BLCAPP62952 87 aa9.96□□□□□ -0.81
VAPB-203ENST00000463370 KLK9Q2XQG4 91 aa9.96□□□□□ -0.81
VAPB-203ENST00000463370 C19orf54Q5BKX5 351 aa9.96□□□□□ -0.81
VAPB-203ENST00000463370 HIST2H2BCQ6DN03 193 aa9.96□□□□□ -0.81
VAPB-203ENST00000463370 BAGE2Q86Y30 109 aa9.96□□□□□ -0.81
VAPB-203ENST00000463370 BPIFA4PQ86YQ2 179 aa9.96□□□□□ -0.81
VAPB-203ENST00000463370 LINC01356Q8N9X3 169 aa9.96□□□□□ -0.81
VAPB-203ENST00000463370 VN1R17PQ8TDU5 208 aa9.96□□□□□ -0.81
VAPB-203ENST00000463370 TMEM68Q96MH6 324 aa9.96□□□□□ -0.81
VAPB-203ENST00000463370 IL36BQ9NZH7 164 aa9.96□□□□□ -0.81
VAPB-203ENST00000463370 KLK9Q9UKQ9 250 aa9.96□□□□□ -0.81
VAPB-203ENST00000463370 KMT2BQ9UMN6 2715 aaPredicted RBP9.96□□□□□ -0.82
VAPB-203ENST00000463370 A6NDX4 124 aa9.96□□□□□ -0.82
VAPB-203ENST00000463370 TCRAP04437 139 aa9.96□□□□□ -0.82
VAPB-203ENST00000463370 TMEM183BQ1AE95 376 aa9.96□□□□□ -0.82
VAPB-203ENST00000463370 LINC00518Q8N0U6 118 aa9.96□□□□□ -0.82
VAPB-203ENST00000463370 C5orf17Q8NAS9 161 aa9.96□□□□□ -0.82
VAPB-203ENST00000463370 NOL4LQ96MY1 436 aaPredicted RBP9.96□□□□□ -0.82
VAPB-203ENST00000463370 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.96□□□□□ -0.821e-18■■■■■ 37.9
VAPB-203ENST00000463370 CSPG4Q6UVK1 2322 aa9.95□□□□□ -0.82
VAPB-203ENST00000463370 TRAV41A0A0B4J266 112 aa9.95□□□□□ -0.82
VAPB-203ENST00000463370 TGFAP01135 160 aa9.95□□□□□ -0.82
VAPB-203ENST00000463370 RPL15P61313 204 aaKnown RBP9.95□□□□□ -0.82
VAPB-203ENST00000463370 CLEC19AQ6UXS0 136 aa9.95□□□□□ -0.82
VAPB-203ENST00000463370 ATG101Q9BSB4 218 aa9.95□□□□□ -0.82
VAPB-203ENST00000463370 KLF12Q9Y4X4 402 aa9.95□□□□□ -0.82
VAPB-203ENST00000463370 MXRA5Q9NR99 2828 aa9.95□□□□□ -0.82
VAPB-203ENST00000463370 ACTL10Q5JWF8 245 aa9.95□□□□□ -0.82
VAPB-203ENST00000463370 IBA57Q5T440 356 aaKnown RBP9.95□□□□□ -0.82
VAPB-203ENST00000463370 PRR27Q6MZM9 219 aa9.95□□□□□ -0.82
VAPB-203ENST00000463370 SIGLEC15Q6ZMC9 328 aa9.95□□□□□ -0.82
VAPB-203ENST00000463370 ASCL2Q99929 193 aa9.95□□□□□ -0.82
VAPB-203ENST00000463370 OTORQ9NRC9 128 aa9.95□□□□□ -0.82
VAPB-203ENST00000463370 HOXA5P20719 270 aa9.94□□□□□ -0.82
VAPB-203ENST00000463370 TCL1AP56279 114 aa9.94□□□□□ -0.82
VAPB-203ENST00000463370 UBE2G1P62253 170 aa9.94□□□□□ -0.82
VAPB-203ENST00000463370 OR8I2Q8N0Y5 310 aa9.94□□□□□ -0.82
VAPB-203ENST00000463370 OR4F17Q8NGA8 305 aa9.94□□□□□ -0.82
VAPB-203ENST00000463370 TXN2Q99757 166 aa9.94□□□□□ -0.82
VAPB-203ENST00000463370 TCEAL7Q9BRU2 100 aa9.94□□□□□ -0.82
VAPB-203ENST00000463370 OSTCQ9NRP0 149 aa9.94□□□□□ -0.82
VAPB-203ENST00000463370 TGOLN2O43493 480 aa9.94□□□□□ -0.82
VAPB-203ENST00000463370 SLC35B1P78383 322 aa9.94□□□□□ -0.82
VAPB-203ENST00000463370 DEFB113Q30KQ7 82 aa9.94□□□□□ -0.82
VAPB-203ENST00000463370 PDZD11Q5EBL8 140 aa9.94□□□□□ -0.82
VAPB-203ENST00000463370 TOMM20LQ6UXN7 152 aa9.94□□□□□ -0.82
VAPB-203ENST00000463370 LINC00322Q6ZN03 302 aaPredicted RBP9.94□□□□□ -0.82
VAPB-203ENST00000463370 GNB4Q9HAV0 340 aa9.94□□□□□ -0.82
VAPB-203ENST00000463370 M0R3E3 92 aa9.93□□□□□ -0.82
VAPB-203ENST00000463370 SPINK4O60575 86 aa9.93□□□□□ -0.82
VAPB-203ENST00000463370 IGLV2-11P01706 119 aa9.93□□□□□ -0.82
VAPB-203ENST00000463370 GATA3P23771 443 aa9.93□□□□□ -0.82
VAPB-203ENST00000463370 DEFB112Q30KQ8 113 aa9.93□□□□□ -0.82
VAPB-203ENST00000463370 GOLT1AQ6ZVE7 132 aa9.93□□□□□ -0.82
VAPB-203ENST00000463370 ZFAND3Q9H8U3 227 aa9.93□□□□□ -0.82
VAPB-203ENST00000463370 SERTAD4Q9NUC0 356 aa9.93□□□□□ -0.82
VAPB-203ENST00000463370 IGHV4-59P01825 116 aa9.93□□□□□ -0.82
VAPB-203ENST00000463370 CRIP2P52943 208 aaPredicted RBP9.93□□□□□ -0.82
VAPB-203ENST00000463370 RPEL1Q2QD12 228 aa9.93□□□□□ -0.82
VAPB-203ENST00000463370 Q5PR19 223 aa9.93□□□□□ -0.82
VAPB-203ENST00000463370 MLST8Q9BVC4 326 aa9.93□□□□□ -0.82
VAPB-203ENST00000463370 SMAD5-AS1Q9Y6J3 95 aa9.93□□□□□ -0.82
VAPB-203ENST00000463370 ZNF705GA8MUZ8 300 aaPredicted RBP9.92□□□□□ -0.82
VAPB-203ENST00000463370 LTAP01374 205 aa9.92□□□□□ -0.82
VAPB-203ENST00000463370 IGHV4-31P0DP07 118 aa9.92□□□□□ -0.82
VAPB-203ENST00000463370 CBLN1P23435 193 aa9.92□□□□□ -0.82
VAPB-203ENST00000463370 LOXL1Q08397 574 aaPredicted RBP9.92□□□□□ -0.82
VAPB-203ENST00000463370 LCNL1Q6ZST4 164 aa9.92□□□□□ -0.82
VAPB-203ENST00000463370 NUDT10Q8NFP7 164 aa9.92□□□□□ -0.82
VAPB-203ENST00000463370 NUDT11Q96G61 164 aa9.92□□□□□ -0.82
VAPB-203ENST00000463370 GPR82Q96P67 336 aa9.92□□□□□ -0.82
VAPB-203ENST00000463370 RABAC1Q9UI14 185 aa9.92□□□□□ -0.82
VAPB-203ENST00000463370 IGHV3-66A0A0C4DH42 116 aa9.92□□□□□ -0.82
VAPB-203ENST00000463370 CLPSL1A2RUU4 121 aa9.92□□□□□ -0.82
VAPB-203ENST00000463370 IGHG2P01859 326 aa9.92□□□□□ -0.82
VAPB-203ENST00000463370 IGF1P05019 195 aa9.92□□□□□ -0.82
VAPB-203ENST00000463370 KRTAP1-3Q8IUG1 177 aa9.92□□□□□ -0.82
VAPB-203ENST00000463370 TEX15Q9BXT5 2789 aa9.91□□□□□ -0.82
VAPB-203ENST00000463370 IGHV3OR16-13A0A075B7E8 117 aa9.91□□□□□ -0.82
VAPB-203ENST00000463370 IGHV3-74A0A0B4J1X5 117 aa9.91□□□□□ -0.82
VAPB-203ENST00000463370 TRGV3P03979 118 aa9.91□□□□□ -0.82
VAPB-203ENST00000463370 PPIFP30405 207 aaKnown RBP9.91□□□□□ -0.82
VAPB-203ENST00000463370 CDX1P47902 265 aaPredicted RBP9.91□□□□□ -0.82
VAPB-203ENST00000463370 TMEM95Q3KNT9 176 aa9.91□□□□□ -0.82
VAPB-203ENST00000463370 IGFL4Q6B9Z1 124 aa9.91□□□□□ -0.82
VAPB-203ENST00000463370 CMTM2Q8TAZ6 248 aa9.91□□□□□ -0.82
VAPB-203ENST00000463370 EEF1AKMT3Q96AZ1 226 aa9.91□□□□□ -0.82
VAPB-203ENST00000463370 FMC1Q96HJ9 113 aa9.91□□□□□ -0.82
VAPB-203ENST00000463370 GPR61Q9BZJ8 451 aa9.91□□□□□ -0.82
VAPB-203ENST00000463370 KLK15Q9H2R5 256 aa9.91□□□□□ -0.82
VAPB-203ENST00000463370 TRAPPC1Q9Y5R8 145 aa9.91□□□□□ -0.82
VAPB-203ENST00000463370 TRBV12-3P01733 135 aa9.9□□□□□ -0.82
VAPB-203ENST00000463370 APOHP02749 345 aaPredicted RBP9.9□□□□□ -0.82
VAPB-203ENST00000463370 ATP5G2Q06055 141 aa9.9□□□□□ -0.82
VAPB-203ENST00000463370 Q86TA4 180 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms