RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 SAMD13Q5VXD3 122 aa8.14□□□□□ -1.11
RTF1-202ENST00000462276 FAM122CQ6P4D5 195 aa8.14□□□□□ -1.11
RTF1-202ENST00000462276 BPIFA4PQ86YQ2 179 aa8.14□□□□□ -1.11
RTF1-202ENST00000462276 OR8I2Q8N0Y5 310 aa8.14□□□□□ -1.11
RTF1-202ENST00000462276 VSIRQ9H7M9 311 aa8.14□□□□□ -1.11
RTF1-202ENST00000462276 PLA2G2EQ9NZK7 142 aa8.14□□□□□ -1.11
RTF1-202ENST00000462276 FOLR2P14207 255 aa8.13□□□□□ -1.11
RTF1-202ENST00000462276 GALR1P47211 349 aa8.13□□□□□ -1.11
RTF1-202ENST00000462276 INSL3P51460 131 aa8.13□□□□□ -1.11
RTF1-202ENST00000462276 GUK1Q16774 197 aa8.13□□□□□ -1.11
RTF1-202ENST00000462276 TM4SF20Q53R12 229 aa8.13□□□□□ -1.11
RTF1-202ENST00000462276 FAM74A1Q5RGS3 127 aa8.13□□□□□ -1.11
RTF1-202ENST00000462276 C16orf54Q6UWD8 224 aa8.13□□□□□ -1.11
RTF1-202ENST00000462276 WFDC9Q8NEX5 89 aa8.13□□□□□ -1.11
RTF1-202ENST00000462276 SFT2D1Q8WV19 159 aa8.13□□□□□ -1.11
RTF1-202ENST00000462276 UHRF2Q96PU4 802 aa8.13□□□□□ -1.11
RTF1-202ENST00000462276 MCRIP2Q9BUT9 160 aaKnown RBP8.13□□□□□ -1.11
RTF1-202ENST00000462276 RHPN1-AS1Q9BWJ2 59 aa8.13□□□□□ -1.11
RTF1-202ENST00000462276 TMEM167BQ9NRX6 74 aa8.13□□□□□ -1.11
RTF1-202ENST00000462276 WNK1Q9H4A3 2382 aa8.13□□□□□ -1.11
RTF1-202ENST00000462276 TENM1Q9UKZ4 2725 aa8.12□□□□□ -1.11
RTF1-202ENST00000462276 MAP1LC3B2A6NCE7 125 aa8.12□□□□□ -1.11
RTF1-202ENST00000462276 CHEK1O14757 476 aa8.12□□□□□ -1.11
RTF1-202ENST00000462276 HIST1H1EP10412 219 aaKnown RBP8.12□□□□□ -1.11
RTF1-202ENST00000462276 TAGLN2P37802 199 aaKnown RBP8.12□□□□□ -1.11
RTF1-202ENST00000462276 PSMB3P49720 205 aa8.12□□□□□ -1.11
RTF1-202ENST00000462276 MIR17HGQ75NE6 70 aa8.12□□□□□ -1.11
RTF1-202ENST00000462276 LINC00482Q8N8I6 264 aa8.12□□□□□ -1.11
RTF1-202ENST00000462276 SPATA3Q8NHX4 192 aa8.12□□□□□ -1.11
RTF1-202ENST00000462276 LYPD6BQ8NI32 183 aa8.12□□□□□ -1.11
RTF1-202ENST00000462276 FAM167A-AS1Q96KT0 104 aa8.12□□□□□ -1.11
RTF1-202ENST00000462276 DUX3Q96PT4 197 aa8.12□□□□□ -1.11
RTF1-202ENST00000462276 PAXXQ9BUH6 204 aa8.12□□□□□ -1.11
RTF1-202ENST00000462276 SCRT1Q9BWW7 348 aa8.12□□□□□ -1.11
RTF1-202ENST00000462276 MAP1LC3BQ9GZQ8 125 aa8.12□□□□□ -1.11
RTF1-202ENST00000462276 OR51M1Q9H341 326 aa8.12□□□□□ -1.11
RTF1-202ENST00000462276 HRH4Q9H3N8 390 aa8.12□□□□□ -1.11
RTF1-202ENST00000462276 SLC25A22Q9H936 323 aa8.12□□□□□ -1.11
RTF1-202ENST00000462276 NBEAL1Q6ZS30 2694 aa8.11□□□□□ -1.11
RTF1-202ENST00000462276 IGHV3OR16-8A0A075B7F1 116 aa8.11□□□□□ -1.11
RTF1-202ENST00000462276 TRAV25A0A0B4J276 109 aa8.11□□□□□ -1.11
RTF1-202ENST00000462276 OR7C2O60412 319 aa8.11□□□□□ -1.11
RTF1-202ENST00000462276 ZNF253O75346 499 aa8.11□□□□□ -1.11
RTF1-202ENST00000462276 CSN3P07498 182 aa8.11□□□□□ -1.11
RTF1-202ENST00000462276 NMBP08949 121 aa8.11□□□□□ -1.11
RTF1-202ENST00000462276 FHITP49789 147 aa8.11□□□□□ -1.11
RTF1-202ENST00000462276 PDE6HQ13956 83 aa8.11□□□□□ -1.11
RTF1-202ENST00000462276 ZNF726P1Q15940 193 aa8.11□□□□□ -1.11
RTF1-202ENST00000462276 CLLU1Q5K131 121 aa8.11□□□□□ -1.11
RTF1-202ENST00000462276 LCN15Q6UWW0 184 aa8.11□□□□□ -1.11
RTF1-202ENST00000462276 IL34Q6ZMJ4 242 aa8.11□□□□□ -1.11
RTF1-202ENST00000462276 OR2K2Q8NGT1 345 aa8.11□□□□□ -1.11
RTF1-202ENST00000462276 SUN5Q8TC36 379 aa8.11□□□□□ -1.11
RTF1-202ENST00000462276 GLMPQ8WWB7 406 aa8.11□□□□□ -1.11
RTF1-202ENST00000462276 SLC25A2Q9BXI2 301 aa8.11□□□□□ -1.11
RTF1-202ENST00000462276 GPR61Q9BZJ8 451 aa8.11□□□□□ -1.11
RTF1-202ENST00000462276 NKX6-2Q9C056 277 aaPredicted RBP8.11□□□□□ -1.11
RTF1-202ENST00000462276 CLEC5AQ9NY25 188 aa8.11□□□□□ -1.11
RTF1-202ENST00000462276 ARL2-SNX15V9GYD0 113 aa8.11□□□□□ -1.11
RTF1-202ENST00000462276 ANK2Q01484 3957 aa8.11□□□□□ -1.11
RTF1-202ENST00000462276 A0A087X0K7 114 aa8.1□□□□□ -1.11
RTF1-202ENST00000462276 ZNF207O43670 478 aaKnown RBP8.1□□□□□ -1.11
RTF1-202ENST00000462276 NBEAP1P0C6P0 100 aa8.1□□□□□ -1.11
RTF1-202ENST00000462276 ARL14EPLP0DKL9 152 aa8.1□□□□□ -1.11
RTF1-202ENST00000462276 GCHFRP30047 84 aa8.1□□□□□ -1.11
RTF1-202ENST00000462276 PAFAH1B2P68402 229 aa8.1□□□□□ -1.11
RTF1-202ENST00000462276 SPATA31B1PQ5VZV4 182 aa8.1□□□□□ -1.11
RTF1-202ENST00000462276 LYPD1Q8N2G4 141 aa8.1□□□□□ -1.11
RTF1-202ENST00000462276 DYNLRB2Q8TF09 96 aa8.1□□□□□ -1.11
RTF1-202ENST00000462276 TRAV2A0A0B4J234 112 aa8.09□□□□□ -1.11
RTF1-202ENST00000462276 TRAV5A0A0B4J249 113 aa8.09□□□□□ -1.11
RTF1-202ENST00000462276 ZNF785A8K8V0 405 aa8.09□□□□□ -1.11
RTF1-202ENST00000462276 MRPS12O15235 138 aaKnown RBP8.09□□□□□ -1.11
RTF1-202ENST00000462276 IFNA1P01562 189 aa8.09□□□□□ -1.11
RTF1-202ENST00000462276 APOHP02749 345 aaPredicted RBP8.09□□□□□ -1.11
RTF1-202ENST00000462276 IGLC2P0DOY2 106 aa8.09□□□□□ -1.11
RTF1-202ENST00000462276 GP9P14770 177 aa8.09□□□□□ -1.11
RTF1-202ENST00000462276 ATF4P18848 351 aaPredicted RBP8.09□□□□□ -1.11
RTF1-202ENST00000462276 UBE2L3P68036 154 aaKnown RBP8.09□□□□□ -1.11
RTF1-202ENST00000462276 DEFB114Q30KQ6 69 aa8.09□□□□□ -1.11
RTF1-202ENST00000462276 MORN5Q5VZ52 161 aa8.09□□□□□ -1.11
RTF1-202ENST00000462276 FAM90A2PQ658T7 463 aa8.09□□□□□ -1.11
RTF1-202ENST00000462276 LEMD1Q68G75 181 aa8.09□□□□□ -1.11
RTF1-202ENST00000462276 HIST2H2BDQ6DRA6 164 aa8.09□□□□□ -1.11
RTF1-202ENST00000462276 SIGLEC15Q6ZMC9 328 aa8.09□□□□□ -1.11
RTF1-202ENST00000462276 TXNDC17Q9BRA2 123 aa8.09□□□□□ -1.11
RTF1-202ENST00000462276 TRBV19A0A075B6N1 114 aa8.08□□□□□ -1.12
RTF1-202ENST00000462276 A0A1W2PRE2 83 aa8.08□□□□□ -1.12
RTF1-202ENST00000462276 TSPAN4O14817 238 aa8.08□□□□□ -1.12
RTF1-202ENST00000462276 NDUFS6O75380 124 aaKnown RBP8.08□□□□□ -1.12
RTF1-202ENST00000462276 PSG9Q00887 426 aa8.08□□□□□ -1.12
RTF1-202ENST00000462276 C9orf66Q5T8R8 295 aa8.08□□□□□ -1.12
RTF1-202ENST00000462276 RBPMS2Q6ZRY4 209 aaKnown RBP8.08□□□□□ -1.12
RTF1-202ENST00000462276 TCF24Q7RTU0 167 aa8.08□□□□□ -1.12
RTF1-202ENST00000462276 ARL6IP6Q8N6S5 226 aa8.08□□□□□ -1.12
RTF1-202ENST00000462276 FXYD5Q96DB9 178 aa8.08□□□□□ -1.12
RTF1-202ENST00000462276 TCEAL7Q9BRU2 100 aa8.08□□□□□ -1.12
RTF1-202ENST00000462276 NRN1Q9NPD7 142 aa8.08□□□□□ -1.12
RTF1-202ENST00000462276 MANBALQ9NQG1 85 aa8.08□□□□□ -1.12
RTF1-202ENST00000462276 MED9Q9NWA0 146 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms