RNA–Protein interactions for RNA: ENST00000460810.1

CCDC58-202, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-202ENST00000460810 LY6LH3BQJ8 138 aa1.95□□□□□ -2.1
CCDC58-202ENST00000460810 RER1O15258 196 aa1.95□□□□□ -2.1
CCDC58-202ENST00000460810 NDUFA2O43678 99 aa1.95□□□□□ -2.1
CCDC58-202ENST00000460810 SRP9P49458 86 aaKnown RBP1.95□□□□□ -2.1
CCDC58-202ENST00000460810 LINC00305Q7Z4B0 112 aa1.95□□□□□ -2.1
CCDC58-202ENST00000460810 OR4K15Q8NH41 348 aa1.95□□□□□ -2.1
CCDC58-202ENST00000460810 NHP2Q9NX24 153 aaKnown RBP1.95□□□□□ -2.1
CCDC58-202ENST00000460810 LTBP2Q14767 1821 aa1.95□□□□□ -2.1
CCDC58-202ENST00000460810 XIRP1Q702N8 1843 aaKnown RBP1.95□□□□□ -2.1
CCDC58-202ENST00000460810 STRCQ7RTU9 1775 aa1.95□□□□□ -2.1
CCDC58-202ENST00000460810 COL4A2P08572 1712 aa1.94□□□□□ -2.1
CCDC58-202ENST00000460810 GLI3P10071 1580 aa1.94□□□□□ -2.1
CCDC58-202ENST00000460810 FRMPD1Q5SYB0 1578 aa1.94□□□□□ -2.1
CCDC58-202ENST00000460810 A8MWV9 139 aa1.94□□□□□ -2.1
CCDC58-202ENST00000460810 B4DSR2 109 aa1.94□□□□□ -2.1
CCDC58-202ENST00000460810 DPM2O94777 84 aa1.94□□□□□ -2.1
CCDC58-202ENST00000460810 OR2H2O95918 312 aa1.94□□□□□ -2.1
CCDC58-202ENST00000460810 DBIP07108 87 aaKnown RBP1.94□□□□□ -2.1
CCDC58-202ENST00000460810 SCTP09683 121 aa1.94□□□□□ -2.1
CCDC58-202ENST00000460810 NDUFA6P56556 154 aa1.94□□□□□ -2.1
CCDC58-202ENST00000460810 ZNF181Q2M3W8 571 aa1.94□□□□□ -2.1
CCDC58-202ENST00000460810 CCDC58Q4VC31 144 aa1.94□□□□□ -2.1
CCDC58-202ENST00000460810 MORN2Q502X0 79 aa1.94□□□□□ -2.1
CCDC58-202ENST00000460810 RNASE10Q5GAN6 216 aaKnown RBP1.94□□□□□ -2.1
CCDC58-202ENST00000460810 C4orf22Q6V702 233 aa1.94□□□□□ -2.1
CCDC58-202ENST00000460810 C7orf65Q6ZTY9 151 aa1.94□□□□□ -2.1
CCDC58-202ENST00000460810 LYPD1Q8N2G4 141 aa1.94□□□□□ -2.1
CCDC58-202ENST00000460810 LRRC18Q8N456 261 aa1.94□□□□□ -2.1
CCDC58-202ENST00000460810 OR5D16Q8NGK9 328 aa1.94□□□□□ -2.1
CCDC58-202ENST00000460810 RETNLBQ9BQ08 111 aa1.94□□□□□ -2.1
CCDC58-202ENST00000460810 SLC50A1Q9BRV3 221 aa1.94□□□□□ -2.1
CCDC58-202ENST00000460810 LXNQ9BS40 222 aa1.94□□□□□ -2.1
CCDC58-202ENST00000460810 CXCL16Q9H2A7 254 aa1.94□□□□□ -2.1
CCDC58-202ENST00000460810 NIT2Q9NQR4 276 aa1.94□□□□□ -2.1
CCDC58-202ENST00000460810 TRPM1Q7Z4N2 1603 aa1.94□□□□□ -2.1
CCDC58-202ENST00000460810 SHROOM3Q8TF72 1996 aa1.94□□□□□ -2.1
CCDC58-202ENST00000460810 A2MP01023 1474 aa1.94□□□□□ -2.1
CCDC58-202ENST00000460810 NUP98P52948 1817 aa1.94□□□□□ -2.1
CCDC58-202ENST00000460810 CUL9Q8IWT3 2517 aa1.93□□□□□ -2.1
CCDC58-202ENST00000460810 PIK3C2AO00443 1686 aa1.93□□□□□ -2.1
CCDC58-202ENST00000460810 NUP210Q8TEM1 1887 aaPredicted RBP1.93□□□□□ -2.1
CCDC58-202ENST00000460810 TRAV13-1A0A0B4J241 112 aa1.93□□□□□ -2.1
CCDC58-202ENST00000460810 ZNF737O75373 536 aa1.93□□□□□ -2.1
CCDC58-202ENST00000460810 C1QCP02747 245 aa1.93□□□□□ -2.1
CCDC58-202ENST00000460810 MT-ND4LP03901 98 aa1.93□□□□□ -2.1
CCDC58-202ENST00000460810 ASAH2BP0C7U1 165 aa1.93□□□□□ -2.1
CCDC58-202ENST00000460810 ZNF705BP0CI00 300 aaPredicted RBP1.93□□□□□ -2.1
CCDC58-202ENST00000460810 SSR2P43308 183 aa1.93□□□□□ -2.1
CCDC58-202ENST00000460810 KLRD1Q13241 179 aa1.93□□□□□ -2.1
CCDC58-202ENST00000460810 ZNF846Q147U1 533 aa1.93□□□□□ -2.1
CCDC58-202ENST00000460810 SPCS2Q15005 226 aa1.93□□□□□ -2.1
CCDC58-202ENST00000460810 TCTE3Q8IZS6 198 aa1.93□□□□□ -2.1
CCDC58-202ENST00000460810 LINC00301Q8NCQ3 95 aa1.93□□□□□ -2.1
CCDC58-202ENST00000460810 BRK1Q8WUW1 75 aa1.93□□□□□ -2.1
CCDC58-202ENST00000460810 RTL9Q8NET4 1388 aa1.93□□□□□ -2.1
CCDC58-202ENST00000460810 BICRAQ9NZM4 1560 aa1.93□□□□□ -2.1
CCDC58-202ENST00000460810 RTEL1-TNFRSF6BF6WH68 1400 aa1.92□□□□□ -2.1
CCDC58-202ENST00000460810 TRGV4A0A0C4DH28 118 aa1.92□□□□□ -2.1
CCDC58-202ENST00000460810 H3BMG7 143 aa1.92□□□□□ -2.1
CCDC58-202ENST00000460810 OR1I1O60431 355 aa1.92□□□□□ -2.1
CCDC58-202ENST00000460810 IGLV1-51P01701 117 aa1.92□□□□□ -2.1
CCDC58-202ENST00000460810 MT-ND6P03923 174 aa1.92□□□□□ -2.1
CCDC58-202ENST00000460810 IFNA4P05014 189 aa1.92□□□□□ -2.1
CCDC58-202ENST00000460810 UBBP0CG47 229 aa1.92□□□□□ -2.1
CCDC58-202ENST00000460810 COX4I1P13073 169 aa1.92□□□□□ -2.1
CCDC58-202ENST00000460810 MIFP14174 115 aa1.92□□□□□ -2.1
CCDC58-202ENST00000460810 ROMO1P60602 79 aa1.92□□□□□ -2.1
CCDC58-202ENST00000460810 HIST1H1AQ02539 215 aaPredicted RBP1.92□□□□□ -2.1
CCDC58-202ENST00000460810 KRTAP21-2Q3LI59 83 aa1.92□□□□□ -2.1
CCDC58-202ENST00000460810 SPANXN5Q5MJ07 72 aa1.92□□□□□ -2.1
CCDC58-202ENST00000460810 OR51A4Q8NGJ6 313 aa1.92□□□□□ -2.1
CCDC58-202ENST00000460810 OR5H6Q8NGV6 325 aa1.92□□□□□ -2.1
CCDC58-202ENST00000460810 POP5Q969H6 163 aaKnown RBP1.92□□□□□ -2.1
CCDC58-202ENST00000460810 CHCHD1Q96BP2 118 aaKnown RBP1.92□□□□□ -2.1
CCDC58-202ENST00000460810 PFDN5Q99471 154 aa1.92□□□□□ -2.1
CCDC58-202ENST00000460810 TSC22D3Q99576 134 aa1.92□□□□□ -2.1
CCDC58-202ENST00000460810 LINC00467Q9BRT7 94 aa1.92□□□□□ -2.1
CCDC58-202ENST00000460810 COPZ2Q9P299 210 aa1.92□□□□□ -2.1
CCDC58-202ENST00000460810 MED23Q9ULK4 1368 aa1.92□□□□□ -2.1
CCDC58-202ENST00000460810 ANKRD31Q8N7Z5 1873 aa1.92□□□□□ -2.1
CCDC58-202ENST00000460810 SOGA1O94964 1423 aa1.91□□□□□ -2.1
CCDC58-202ENST00000460810 SBF1O95248 1867 aa1.91□□□□□ -2.1
CCDC58-202ENST00000460810 PXDNLA1KZ92 1463 aa1.91□□□□□ -2.1
CCDC58-202ENST00000460810 TCOF1Q13428 1488 aaKnown RBP1.91□□□□□ -2.1
CCDC58-202ENST00000460810 IGKV2D-26A0A0A0MRZ7 120 aa1.91□□□□□ -2.1
CCDC58-202ENST00000460810 TRBV27A0A0K0K1C4 114 aa1.91□□□□□ -2.1
CCDC58-202ENST00000460810 EFCAB10A6NFE3 127 aa1.91□□□□□ -2.1
CCDC58-202ENST00000460810 H3BRN7 92 aa1.91□□□□□ -2.1
CCDC58-202ENST00000460810 BAALC-AS2P0C853 105 aa1.91□□□□□ -2.1
CCDC58-202ENST00000460810 MPC1LP0DKB6 136 aa1.91□□□□□ -2.1
CCDC58-202ENST00000460810 RPL22P35268 128 aaKnown RBP1.91□□□□□ -2.1
CCDC58-202ENST00000460810 DEFB113Q30KQ7 82 aa1.91□□□□□ -2.1
CCDC58-202ENST00000460810 NAT14Q8WUY8 206 aa1.91□□□□□ -2.1
CCDC58-202ENST00000460810 DIRC1Q969H9 104 aa1.91□□□□□ -2.1
CCDC58-202ENST00000460810 PRELID3AQ96N28 172 aa1.91□□□□□ -2.1
CCDC58-202ENST00000460810 CCDC88CQ9P219 2028 aa1.91□□□□□ -2.1
CCDC58-202ENST00000460810 ARHGEF11O15085 1522 aa1.91□□□□□ -2.1
CCDC58-202ENST00000460810 NISCHQ9Y2I1 1504 aa1.91□□□□□ -2.1
CCDC58-202ENST00000460810 IGKV3D-11A0A0A0MRZ8 115 aa1.9□□□□□ -2.11
CCDC58-202ENST00000460810 UBL3O95164 117 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms