RNA–Protein interactions for RNA: ENST00000460620.5

PTPN22-203, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 1,794 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-203ENST00000460620 FAM172AQ8WUF8 416 aa0.12□□□□□ -2.39
PTPN22-203ENST00000460620 POP5Q969H6 163 aaKnown RBP0.12□□□□□ -2.39
PTPN22-203ENST00000460620 BORCS7Q96B45 105 aa0.12□□□□□ -2.39
PTPN22-203ENST00000460620 SLC25A21Q9BQT8 299 aaPredicted RBP0.12□□□□□ -2.39
PTPN22-203ENST00000460620 LIMD2Q9BT23 127 aa0.12□□□□□ -2.39
PTPN22-203ENST00000460620 C20orf27Q9GZN8 174 aa0.12□□□□□ -2.39
PTPN22-203ENST00000460620 TMEM133Q9H2Q1 129 aa0.12□□□□□ -2.39
PTPN22-203ENST00000460620 TRABDQ9H4I3 376 aa0.12□□□□□ -2.39
PTPN22-203ENST00000460620 PSTPIP2Q9H939 334 aa0.12□□□□□ -2.39
PTPN22-203ENST00000460620 TAF9BQ9HBM6 251 aa0.12□□□□□ -2.39
PTPN22-203ENST00000460620 NIT2Q9NQR4 276 aa0.12□□□□□ -2.39
PTPN22-203ENST00000460620 GID8Q9NWU2 228 aa0.12□□□□□ -2.39
PTPN22-203ENST00000460620 TVP23BQ9NYZ1 205 aa0.12□□□□□ -2.39
PTPN22-203ENST00000460620 OR5AC2Q9NZP5 309 aa0.12□□□□□ -2.39
PTPN22-203ENST00000460620 KLK9Q9UKQ9 250 aa0.12□□□□□ -2.39
PTPN22-203ENST00000460620 SLC35A3Q9Y2D2 325 aa0.12□□□□□ -2.39
PTPN22-203ENST00000460620 ARL2BPQ9Y2Y0 163 aa0.12□□□□□ -2.39
PTPN22-203ENST00000460620 RNF11Q9Y3C5 154 aa0.12□□□□□ -2.39
PTPN22-203ENST00000460620 SNURFQ9Y675 71 aa0.12□□□□□ -2.39
PTPN22-203ENST00000460620 CHCHD2Q9Y6H1 151 aaPredicted RBP0.12□□□□□ -2.39
PTPN22-203ENST00000460620 PBRM1Q86U86 1689 aa0.12□□□□□ -2.39
PTPN22-203ENST00000460620 COL1A1P02452 1464 aaPredicted RBP0.12□□□□□ -2.39
PTPN22-203ENST00000460620 CDK5RAP2Q96SN8 1893 aa0.12□□□□□ -2.39
PTPN22-203ENST00000460620 FRMPD1Q5SYB0 1578 aa0.12□□□□□ -2.39
PTPN22-203ENST00000460620 MYH9P35579 1960 aaKnown RBP0.12□□□□□ -2.39
PTPN22-203ENST00000460620 NCOA1Q15788 1441 aa0.12□□□□□ -2.39
PTPN22-203ENST00000460620 KIAA1549LQ6ZVL6 1849 aa0.12□□□□□ -2.39
PTPN22-203ENST00000460620 TRBV19A0A075B6N1 114 aa0.11□□□□□ -2.39
PTPN22-203ENST00000460620 TRAV23DV6A0A075B6W5 121 aa0.11□□□□□ -2.39
PTPN22-203ENST00000460620 C9orf170A2RU37 121 aa0.11□□□□□ -2.39
PTPN22-203ENST00000460620 NUPR2A6NF83 97 aa0.11□□□□□ -2.39
PTPN22-203ENST00000460620 TMEM238C9JI98 176 aa0.11□□□□□ -2.39
PTPN22-203ENST00000460620 H7BYZ3 331 aa0.11□□□□□ -2.39
PTPN22-203ENST00000460620 HYPMO75409 117 aa0.11□□□□□ -2.39
PTPN22-203ENST00000460620 OR2B3O76000 313 aa0.11□□□□□ -2.39
PTPN22-203ENST00000460620 ATG12O94817 140 aa0.11□□□□□ -2.39
PTPN22-203ENST00000460620 COX6A1P12074 109 aa0.11□□□□□ -2.39
PTPN22-203ENST00000460620 CRYBA4P53673 196 aa0.11□□□□□ -2.39
PTPN22-203ENST00000460620 ROMO1P60602 79 aa0.11□□□□□ -2.39
PTPN22-203ENST00000460620 YPEL3P61236 119 aaPredicted RBP0.11□□□□□ -2.39
PTPN22-203ENST00000460620 ARF6P62330 175 aa0.11□□□□□ -2.39
PTPN22-203ENST00000460620 UBE2BP63146 152 aa0.11□□□□□ -2.39
PTPN22-203ENST00000460620 HIST1H3AP68431 136 aa0.11□□□□□ -2.39
PTPN22-203ENST00000460620 POU6F1Q14863 301 aa0.11□□□□□ -2.39
PTPN22-203ENST00000460620 SPA17Q15506 151 aa0.11□□□□□ -2.39
PTPN22-203ENST00000460620 LTC4SQ16873 150 aa0.11□□□□□ -2.39
PTPN22-203ENST00000460620 RGS21Q2M5E4 152 aa0.11□□□□□ -2.39
PTPN22-203ENST00000460620 SPANXN5Q5MJ07 72 aa0.11□□□□□ -2.39
PTPN22-203ENST00000460620 KRTAP26-1Q6PEX3 210 aa0.11□□□□□ -2.39
PTPN22-203ENST00000460620 DHRS4L2Q6PKH6 230 aa0.11□□□□□ -2.39
PTPN22-203ENST00000460620 DEFB128Q7Z7B8 93 aa0.11□□□□□ -2.39
PTPN22-203ENST00000460620 RPS19BP1Q86WX3 136 aaKnown RBP0.11□□□□□ -2.39
PTPN22-203ENST00000460620 Q8N6K4 173 aa0.11□□□□□ -2.39
PTPN22-203ENST00000460620 C12orf29Q8N999 325 aa0.11□□□□□ -2.39
PTPN22-203ENST00000460620 ST6GALNAC3Q8NDV1 305 aa0.11□□□□□ -2.39
PTPN22-203ENST00000460620 PXT1Q8NFP0 134 aa0.11□□□□□ -2.39
PTPN22-203ENST00000460620 OR4K15Q8NH41 348 aa0.11□□□□□ -2.39
PTPN22-203ENST00000460620 BORCS5Q969J3 196 aa0.11□□□□□ -2.39
PTPN22-203ENST00000460620 RAB37Q96AX2 223 aa0.11□□□□□ -2.39
PTPN22-203ENST00000460620 CHCHD1Q96BP2 118 aaKnown RBP0.11□□□□□ -2.39
PTPN22-203ENST00000460620 CHMP6Q96FZ7 201 aa0.11□□□□□ -2.39
PTPN22-203ENST00000460620 C2orf50Q96LR7 162 aa0.11□□□□□ -2.39
PTPN22-203ENST00000460620 ZNF714Q96N38 554 aa0.11□□□□□ -2.39
PTPN22-203ENST00000460620 GPX7Q96SL4 187 aaPredicted RBP0.11□□□□□ -2.39
PTPN22-203ENST00000460620 GINS3Q9BRX5 216 aa0.11□□□□□ -2.39
PTPN22-203ENST00000460620 NPCDR1Q9BY65 106 aa0.11□□□□□ -2.39
PTPN22-203ENST00000460620 CYSTM1Q9H1C7 97 aa0.11□□□□□ -2.39
PTPN22-203ENST00000460620 NMNAT1Q9HAN9 279 aaPredicted RBP0.11□□□□□ -2.39
PTPN22-203ENST00000460620 MED9Q9NWA0 146 aa0.11□□□□□ -2.39
PTPN22-203ENST00000460620 PRNDQ9UKY0 176 aa0.11□□□□□ -2.39
PTPN22-203ENST00000460620 KIAA1109Q2LD37 5005 aa0.11□□□□□ -2.39
PTPN22-203ENST00000460620 USP54Q70EL1 1684 aa0.11□□□□□ -2.39
PTPN22-203ENST00000460620 CTTNBP2Q8WZ74 1663 aa0.11□□□□□ -2.39
PTPN22-203ENST00000460620 RYR2Q92736 4967 aa0.11□□□□□ -2.39
PTPN22-203ENST00000460620 RTL1A6NKG5 1358 aa0.11□□□□□ -2.39
PTPN22-203ENST00000460620 ABCA4P78363 2273 aa0.11□□□□□ -2.39
PTPN22-203ENST00000460620 CECR2Q9BXF3 1484 aa0.11□□□□□ -2.39
PTPN22-203ENST00000460620 UHRF1BP1Q6BDS2 1440 aa0.11□□□□□ -2.39
PTPN22-203ENST00000460620 LOC110117498A0A087WWA1 95 aa0.11□□□□□ -2.39
PTPN22-203ENST00000460620 TRAV10A0A0B4J240 114 aa0.11□□□□□ -2.39
PTPN22-203ENST00000460620 TRBV6-4A0A1B0GX49 114 aa0.11□□□□□ -2.39
PTPN22-203ENST00000460620 DUXBA0A1W2PPF3 345 aa0.11□□□□□ -2.39
PTPN22-203ENST00000460620 TCRBV4S1A1TA0A5B7 111 aa0.11□□□□□ -2.39
PTPN22-203ENST00000460620 FUOMA2VDF0 154 aa0.11□□□□□ -2.39
PTPN22-203ENST00000460620 C7orf71A4D174 169 aa0.11□□□□□ -2.39
PTPN22-203ENST00000460620 G3V2T6 193 aa0.11□□□□□ -2.39
PTPN22-203ENST00000460620 M0R233 179 aa0.11□□□□□ -2.39
PTPN22-203ENST00000460620 NCR3O14931 201 aa0.11□□□□□ -2.39
PTPN22-203ENST00000460620 CCL16O15467 120 aa0.11□□□□□ -2.39
PTPN22-203ENST00000460620 PROSCO94903 275 aa0.11□□□□□ -2.39
PTPN22-203ENST00000460620 DHFRP00374 187 aa0.11□□□□□ -2.39
PTPN22-203ENST00000460620 PPYP01298 95 aa0.11□□□□□ -2.39
PTPN22-203ENST00000460620 IFNA7P01567 189 aa0.11□□□□□ -2.39
PTPN22-203ENST00000460620 TFF1P04155 84 aa0.11□□□□□ -2.39
PTPN22-203ENST00000460620 CD14P08571 375 aa0.11□□□□□ -2.39
PTPN22-203ENST00000460620 BAALC-AS2P0C853 105 aa0.11□□□□□ -2.39
PTPN22-203ENST00000460620 ANP32AP39687 249 aaKnown RBP0.11□□□□□ -2.39
PTPN22-203ENST00000460620 EFNA4P52798 201 aa0.11□□□□□ -2.39
PTPN22-203ENST00000460620 HSPE1P61604 102 aaKnown RBP0.11□□□□□ -2.39
PTPN22-203ENST00000460620 LCN6P62502 163 aa0.11□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms