RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 MPC2O95563 127 aa2.5□□□□□ -2.01
CCDC50-203ENST00000460064 ATP6V0CP27449 155 aa2.5□□□□□ -2.01
CCDC50-203ENST00000460064 TAS2R45P59539 299 aa2.5□□□□□ -2.01
CCDC50-203ENST00000460064 RHOGP84095 191 aa2.5□□□□□ -2.01
CCDC50-203ENST00000460064 MRPL51Q4U2R6 128 aaKnown RBP2.5□□□□□ -2.01
CCDC50-203ENST00000460064 LINC01554Q52M75 96 aa2.5□□□□□ -2.01
CCDC50-203ENST00000460064 MEIG1Q5JSS6 88 aa2.5□□□□□ -2.01
CCDC50-203ENST00000460064 RPL22L1Q6P5R6 122 aaKnown RBP2.5□□□□□ -2.01
CCDC50-203ENST00000460064 PHF5AQ7RTV0 110 aaKnown RBP2.5□□□□□ -2.01
CCDC50-203ENST00000460064 SPATA12Q7Z6I5 190 aa2.5□□□□□ -2.01
CCDC50-203ENST00000460064 MMGT1Q8N4V1 131 aa2.5□□□□□ -2.01
CCDC50-203ENST00000460064 OR5D14Q8NGL3 314 aa2.5□□□□□ -2.01
CCDC50-203ENST00000460064 WFDC5Q8TCV5 224 aa2.5□□□□□ -2.01
CCDC50-203ENST00000460064 MAGOHBQ96A72 148 aaKnown RBP2.5□□□□□ -2.01
CCDC50-203ENST00000460064 TCEAL2Q9H3H9 227 aaPredicted RBP2.5□□□□□ -2.01
CCDC50-203ENST00000460064 ZNF638Q14966 1978 aaKnown RBP2.5□□□□□ -2.01
CCDC50-203ENST00000460064 CDK5RAP2Q96SN8 1893 aa2.5□□□□□ -2.01
CCDC50-203ENST00000460064 DSPPQ9NZW4 1301 aa2.49□□□□□ -2.01
CCDC50-203ENST00000460064 TRAV13-1A0A0B4J241 112 aa2.49□□□□□ -2.01
CCDC50-203ENST00000460064 MEIS3P1A6NDR6 274 aa2.49□□□□□ -2.01
CCDC50-203ENST00000460064 C1QAP02745 245 aa2.49□□□□□ -2.01
CCDC50-203ENST00000460064 CRYGSP22914 178 aa2.49□□□□□ -2.01
CCDC50-203ENST00000460064 BRS3P32247 399 aa2.49□□□□□ -2.01
CCDC50-203ENST00000460064 AQP4P55087 323 aa2.49□□□□□ -2.01
CCDC50-203ENST00000460064 ARPP19P56211 112 aa2.49□□□□□ -2.01
CCDC50-203ENST00000460064 PLGLB1Q02325 96 aa2.49□□□□□ -2.01
CCDC50-203ENST00000460064 HSD52Q0P140 79 aa2.49□□□□□ -2.01
CCDC50-203ENST00000460064 COL5A1-AS1Q5SY13 56 aa2.49□□□□□ -2.01
CCDC50-203ENST00000460064 LINC00311Q8N616 119 aa2.49□□□□□ -2.01
CCDC50-203ENST00000460064 OR8D4Q8NGM9 314 aa2.49□□□□□ -2.01
CCDC50-203ENST00000460064 NAT14Q8WUY8 206 aa2.49□□□□□ -2.01
CCDC50-203ENST00000460064 MRPL32Q9BYC8 188 aaKnown RBP2.49□□□□□ -2.01
CCDC50-203ENST00000460064 TMEM191AQ9H0A3 160 aa2.49□□□□□ -2.01
CCDC50-203ENST00000460064 BANF2Q9H503 90 aa2.49□□□□□ -2.01
CCDC50-203ENST00000460064 CAMSAP2Q08AD1 1489 aa2.49□□□□□ -2.01
CCDC50-203ENST00000460064 ATG2BQ96BY7 2078 aa2.49□□□□□ -2.01
CCDC50-203ENST00000460064 HIVEP2P31629 2446 aa2.49□□□□□ -2.01
CCDC50-203ENST00000460064 DOCK4Q8N1I0 1966 aa2.49□□□□□ -2.01
CCDC50-203ENST00000460064 ZFYVE16Q7Z3T8 1539 aa2.48□□□□□ -2.01
CCDC50-203ENST00000460064 FER1L6Q2WGJ9 1857 aa2.48□□□□□ -2.01
CCDC50-203ENST00000460064 PZPP20742 1482 aa2.48□□□□□ -2.01
CCDC50-203ENST00000460064 TCOF1Q13428 1488 aaKnown RBP2.48□□□□□ -2.01
CCDC50-203ENST00000460064 A0A1B0GW54 56 aa2.48□□□□□ -2.01
CCDC50-203ENST00000460064 IGKV1-16P04430 117 aa2.48□□□□□ -2.01
CCDC50-203ENST00000460064 TCRAP04437 139 aa2.48□□□□□ -2.01
CCDC50-203ENST00000460064 RNASE4P34096 147 aaKnown RBP2.48□□□□□ -2.01
CCDC50-203ENST00000460064 GUCA1AP43080 201 aaPredicted RBP2.48□□□□□ -2.01
CCDC50-203ENST00000460064 CSN1S1P47710 185 aa2.48□□□□□ -2.01
CCDC50-203ENST00000460064 DYNLT3P51808 116 aa2.48□□□□□ -2.01
CCDC50-203ENST00000460064 TSPEAR-AS2P59090 65 aa2.48□□□□□ -2.01
CCDC50-203ENST00000460064 HBBP68871 147 aa2.48□□□□□ -2.01
CCDC50-203ENST00000460064 QRFPP83859 136 aa2.48□□□□□ -2.01
CCDC50-203ENST00000460064 HES1Q14469 280 aa2.48□□□□□ -2.01
CCDC50-203ENST00000460064 FAM229BQ4G0N7 80 aa2.48□□□□□ -2.01
CCDC50-203ENST00000460064 PABPC1L2AQ5JQF8 200 aa2.48□□□□□ -2.01
CCDC50-203ENST00000460064 LCN15Q6UWW0 184 aa2.48□□□□□ -2.01
CCDC50-203ENST00000460064 AMTNQ6UX39 209 aa2.48□□□□□ -2.01
CCDC50-203ENST00000460064 RPS19BP1Q86WX3 136 aaKnown RBP2.48□□□□□ -2.01
CCDC50-203ENST00000460064 GKN2Q86XP6 184 aa2.48□□□□□ -2.01
CCDC50-203ENST00000460064 WFDC11Q8NEX6 87 aa2.48□□□□□ -2.01
CCDC50-203ENST00000460064 UPK3BQ9BT76 320 aa2.48□□□□□ -2.01
CCDC50-203ENST00000460064 ADAT1Q9BUB4 502 aaKnown RBP2.48□□□□□ -2.01
CCDC50-203ENST00000460064 C16orf95Q9H693 158 aa2.48□□□□□ -2.01
CCDC50-203ENST00000460064 DSCAML1Q8TD84 2053 aa2.48□□□□□ -2.01
CCDC50-203ENST00000460064 CCDC180Q9P1Z9 1646 aa2.47□□□□□ -2.01
CCDC50-203ENST00000460064 MYH7P12883 1935 aa2.47□□□□□ -2.01
CCDC50-203ENST00000460064 DENND4CQ5VZ89 1909 aa2.47□□□□□ -2.01
CCDC50-203ENST00000460064 DICER1Q9UPY3 1922 aaKnown RBP2.47□□□□□ -2.01
CCDC50-203ENST00000460064 TRAV27A0A087WT01 109 aa2.47□□□□□ -2.01
CCDC50-203ENST00000460064 A0A087X0T9 212 aa2.47□□□□□ -2.01
CCDC50-203ENST00000460064 TRBV27A0A0K0K1C4 114 aa2.47□□□□□ -2.01
CCDC50-203ENST00000460064 C7orf71A4D174 169 aa2.47□□□□□ -2.01
CCDC50-203ENST00000460064 BBIP1A8MTZ0 92 aa2.47□□□□□ -2.01
CCDC50-203ENST00000460064 K7ERJ3 54 aa2.47□□□□□ -2.01
CCDC50-203ENST00000460064 M0R129 80 aa2.47□□□□□ -2.01
CCDC50-203ENST00000460064 LEPROTO15243 131 aa2.47□□□□□ -2.01
CCDC50-203ENST00000460064 SLC25A5P05141 298 aaKnown RBP2.47□□□□□ -2.01
CCDC50-203ENST00000460064 IGHV3-30-3P0DP02 117 aa2.47□□□□□ -2.01
CCDC50-203ENST00000460064 CCL3P10147 92 aa2.47□□□□□ -2.01
CCDC50-203ENST00000460064 SLC25A16P16260 332 aa2.47□□□□□ -2.01
CCDC50-203ENST00000460064 S100A4P26447 101 aaKnown RBP2.47□□□□□ -2.01
CCDC50-203ENST00000460064 FUSP35637 526 aaKnown RBP eCLIP2.47□□□□□ -2.01
CCDC50-203ENST00000460064 SRP14P37108 136 aaKnown RBP2.47□□□□□ -2.01
CCDC50-203ENST00000460064 KISS1Q15726 138 aa2.47□□□□□ -2.01
CCDC50-203ENST00000460064 HSD17B12Q53GQ0 312 aa2.47□□□□□ -2.01
CCDC50-203ENST00000460064 C22orf39Q6P5X5 142 aa2.47□□□□□ -2.01
CCDC50-203ENST00000460064 GTF2H5Q6ZYL4 71 aa2.47□□□□□ -2.01
CCDC50-203ENST00000460064 KRTAP13-1Q8IUC0 172 aa2.47□□□□□ -2.01
CCDC50-203ENST00000460064 OR10AC1Q8NH08 325 aa2.47□□□□□ -2.01
CCDC50-203ENST00000460064 ZCCHC13Q8WW36 166 aaKnown RBP2.47□□□□□ -2.01
CCDC50-203ENST00000460064 DPH3Q96FX2 82 aa2.47□□□□□ -2.01
CCDC50-203ENST00000460064 SMDT1Q9H4I9 107 aa2.47□□□□□ -2.01
CCDC50-203ENST00000460064 METTL1Q9UBP6 276 aaKnown RBP2.47□□□□□ -2.01
CCDC50-203ENST00000460064 SCP2D1Q9UJQ7 156 aa2.47□□□□□ -2.01
CCDC50-203ENST00000460064 SNX12Q9UMY4 172 aa2.47□□□□□ -2.01
CCDC50-203ENST00000460064 RIMBP3CA6NJZ7 1639 aa2.46□□□□□ -2.02
CCDC50-203ENST00000460064 RIMBP3BA6NNM3 1639 aa2.46□□□□□ -2.02
CCDC50-203ENST00000460064 RIMBP3Q9UFD9 1639 aa2.46□□□□□ -2.02
CCDC50-203ENST00000460064 MED14O60244 1454 aa2.46□□□□□ -2.02
CCDC50-203ENST00000460064 ERCC6L2Q5T890 1561 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms