RNA–Protein interactions for RNA: ENST00000456013.5

PTPN6-204, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 1 (best) BASIC

Gene PTPN6, Length 2,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-204ENST00000456013 E7EQL1 145 aa14.02□□□□□ -0.16
PTPN6-204ENST00000456013 HTR1DP28221 377 aa14.02□□□□□ -0.16
PTPN6-204ENST00000456013 SCNM1Q9BWG6 230 aa14.02□□□□□ -0.16
PTPN6-204ENST00000456013 HSPB8Q9UJY1 196 aa14.02□□□□□ -0.16
PTPN6-204ENST00000456013 RNF24Q9Y225 148 aa14.02□□□□□ -0.16
PTPN6-204ENST00000456013 TRBV19A0A075B6N1 114 aa14.02□□□□□ -0.17
PTPN6-204ENST00000456013 HSBP1L1C9JCN9 74 aa14.02□□□□□ -0.17
PTPN6-204ENST00000456013 TOX4O94842 621 aa14.02□□□□□ -0.17
PTPN6-204ENST00000456013 IGKV1-17P01599 117 aa14.02□□□□□ -0.17
PTPN6-204ENST00000456013 ZNF138P52744 262 aa14.02□□□□□ -0.17
PTPN6-204ENST00000456013 SLC25A34Q6PIV7 304 aa14.02□□□□□ -0.17
PTPN6-204ENST00000456013 ZC2HC1AQ96GY0 325 aa14.02□□□□□ -0.17
PTPN6-204ENST00000456013 TMUB1Q9BVT8 246 aa14.02□□□□□ -0.17
PTPN6-204ENST00000456013 TP73-AS1Q9UF72 201 aa14.02□□□□□ -0.17
PTPN6-204ENST00000456013 CACNA1HO95180 2353 aa14.01□□□□□ -0.17
PTPN6-204ENST00000456013 RIGQ13278 110 aa14.01□□□□□ -0.17
PTPN6-204ENST00000456013 MPV17L2Q567V2 206 aa14.01□□□□□ -0.17
PTPN6-204ENST00000456013 BPIFA4PQ86YQ2 179 aa14.01□□□□□ -0.17
PTPN6-204ENST00000456013 SRSF8Q9BRL6 282 aaKnown RBP14.01□□□□□ -0.17
PTPN6-204ENST00000456013 SHANK2-AS3Q9BTD1 123 aa14.01□□□□□ -0.17
PTPN6-204ENST00000456013 PRB3Q04118 309 aaPredicted RBP14.01□□□□□ -0.17
PTPN6-204ENST00000456013 RNF5Q99942 180 aa14.01□□□□□ -0.17
PTPN6-204ENST00000456013 SCRT2Q9NQ03 307 aa14.01□□□□□ -0.17
PTPN6-204ENST00000456013 H3BRN7 92 aa14□□□□□ -0.17
PTPN6-204ENST00000456013 ARMS2P0C7Q2 107 aa14□□□□□ -0.17
PTPN6-204ENST00000456013 FBLN7Q53RD9 439 aa14□□□□□ -0.17
PTPN6-204ENST00000456013 LYPD1Q8N2G4 141 aa14□□□□□ -0.17
PTPN6-204ENST00000456013 NEU4Q8WWR8 484 aaPredicted RBP14□□□□□ -0.17
PTPN6-204ENST00000456013 MS4A6AQ9H2W1 248 aa14□□□□□ -0.17
PTPN6-204ENST00000456013 PKDREJQ9NTG1 2253 aa14□□□□□ -0.17
PTPN6-204ENST00000456013 IGHV2-70DA0A0C4DH43 119 aa14□□□□□ -0.17
PTPN6-204ENST00000456013 A0A1B0GW15 77 aa14□□□□□ -0.17
PTPN6-204ENST00000456013 SIGLEC15Q6ZMC9 328 aa14□□□□□ -0.17
PTPN6-204ENST00000456013 RPEQ96AT9 228 aa14□□□□□ -0.17
PTPN6-204ENST00000456013 C17orf77Q96MU5 243 aa14□□□□□ -0.17
PTPN6-204ENST00000456013 SH3BGRL2Q9UJC5 107 aa14□□□□□ -0.17
PTPN6-204ENST00000456013 CNOT1A5YKK6 2376 aaKnown RBP13.99□□□□□ -0.17
PTPN6-204ENST00000456013 K7EQM0 130 aa13.99□□□□□ -0.17
PTPN6-204ENST00000456013 PSG8Q9UQ74 426 aa13.99□□□□□ -0.17
PTPN6-204ENST00000456013 SMG1Q96Q15 3661 aaKnown RBP13.99□□□□□ -0.17
PTPN6-204ENST00000456013 EP300Q09472 2414 aaPredicted RBP13.99□□□□□ -0.17
PTPN6-204ENST00000456013 K7EIM0 57 aa13.98□□□□□ -0.17
PTPN6-204ENST00000456013 KLK10O43240 276 aa13.98□□□□□ -0.17
PTPN6-204ENST00000456013 CSN3P07498 182 aa13.98□□□□□ -0.17
PTPN6-204ENST00000456013 PSG3Q16557 428 aa13.98□□□□□ -0.17
PTPN6-204ENST00000456013 LINC01545Q5VT33 79 aa13.98□□□□□ -0.17
PTPN6-204ENST00000456013 K7EP13 123 aa13.98□□□□□ -0.17
PTPN6-204ENST00000456013 NUDT3O95989 172 aa13.98□□□□□ -0.17
PTPN6-204ENST00000456013 HLA-DRB1P01911 266 aa13.98□□□□□ -0.17
PTPN6-204ENST00000456013 PLGLAQ15195 96 aa13.98□□□□□ -0.17
PTPN6-204ENST00000456013 BVES-AS1Q5T3Y7 98 aa13.98□□□□□ -0.17
PTPN6-204ENST00000456013 ABCA1O95477 2261 aa13.98□□□□□ -0.17
PTPN6-204ENST00000456013 LY6LH3BQJ8 138 aa13.97□□□□□ -0.17
PTPN6-204ENST00000456013 APOBEC3AP31941 199 aaPredicted RBP13.97□□□□□ -0.17
PTPN6-204ENST00000456013 Q6AWC8 147 aa13.97□□□□□ -0.17
PTPN6-204ENST00000456013 AP5S1Q9NUS5 200 aa13.97□□□□□ -0.17
PTPN6-204ENST00000456013 LOC105371242A0A075B767 164 aa13.97□□□□□ -0.17
PTPN6-204ENST00000456013 COX7A1P24310 79 aa13.97□□□□□ -0.17
PTPN6-204ENST00000456013 C12orf54Q6X4T0 127 aa13.97□□□□□ -0.17
PTPN6-204ENST00000456013 ZNF491Q8N8L2 437 aa13.97□□□□□ -0.17
PTPN6-204ENST00000456013 RNASE8Q8TDE3 154 aaKnown RBP13.97□□□□□ -0.17
PTPN6-204ENST00000456013 PPIAL4CA0A0B4J2A2 164 aa13.96□□□□□ -0.17
PTPN6-204ENST00000456013 B9A039 149 aa13.96□□□□□ -0.17
PTPN6-204ENST00000456013 MRPS12O15235 138 aaKnown RBP13.96□□□□□ -0.17
PTPN6-204ENST00000456013 PPIAL4GP0DN37 164 aa13.96□□□□□ -0.17
PTPN6-204ENST00000456013 CRIP1P50238 77 aa13.96□□□□□ -0.17
PTPN6-204ENST00000456013 GFRALQ6UXV0 394 aa13.96□□□□□ -0.17
PTPN6-204ENST00000456013 MCRIP2Q9BUT9 160 aaKnown RBP13.96□□□□□ -0.17
PTPN6-204ENST00000456013 TRAV30A0A087WSZ9 112 aa13.96□□□□□ -0.18
PTPN6-204ENST00000456013 TAX1BP3O14907 124 aa13.96□□□□□ -0.18
PTPN6-204ENST00000456013 CNIH1O95406 144 aa13.96□□□□□ -0.18
PTPN6-204ENST00000456013 ZNF414Q96IQ9 312 aa13.96□□□□□ -0.18
PTPN6-204ENST00000456013 DEFB125Q8N687 156 aa13.95□□□□□ -0.18
PTPN6-204ENST00000456013 RNF125Q96EQ8 232 aa13.95□□□□□ -0.18
PTPN6-204ENST00000456013 ASCL2Q99929 193 aa13.95□□□□□ -0.18
PTPN6-204ENST00000456013 ZNF747Q9BV97 191 aa13.95□□□□□ -0.18
PTPN6-204ENST00000456013 PCNX1Q96RV3 2341 aa13.95□□□□□ -0.18
PTPN6-204ENST00000456013 CEP250Q9BV73 2442 aa13.95□□□□□ -0.18
PTPN6-204ENST00000456013 H0Y8G0 127 aa13.95□□□□□ -0.18
PTPN6-204ENST00000456013 ZNF493Q6ZR52 646 aa13.95□□□□□ -0.18
PTPN6-204ENST00000456013 WI2-2373I1.2A0A1W2PRP0 233 aa13.94□□□□□ -0.18
PTPN6-204ENST00000456013 LYNX1G3V0Z9 82 aa13.94□□□□□ -0.18
PTPN6-204ENST00000456013 IL4P05112 153 aa13.94□□□□□ -0.18
PTPN6-204ENST00000456013 LYNX1P0DP58 116 aa13.94□□□□□ -0.18
PTPN6-204ENST00000456013 CSN1S1P47710 185 aa13.94□□□□□ -0.18
PTPN6-204ENST00000456013 VAMP3Q15836 100 aa13.94□□□□□ -0.18
PTPN6-204ENST00000456013 FA2HQ7L5A8 372 aa13.94□□□□□ -0.18
PTPN6-204ENST00000456013 OR4C5Q8NGB2 326 aa13.94□□□□□ -0.18
PTPN6-204ENST00000456013 ABHD17AQ96GS6 310 aa13.94□□□□□ -0.18
PTPN6-204ENST00000456013 RBX1P62877 108 aa13.94□□□□□ -0.18
PTPN6-204ENST00000456013 RHOGP84095 191 aa13.94□□□□□ -0.18
PTPN6-204ENST00000456013 HIST1H1AQ02539 215 aaPredicted RBP13.94□□□□□ -0.18
PTPN6-204ENST00000456013 OR10AG1Q8NH19 301 aa13.94□□□□□ -0.18
PTPN6-204ENST00000456013 PRSS3P2Q8NHM4 247 aa13.94□□□□□ -0.18
PTPN6-204ENST00000456013 Q8NA96 180 aa13.93□□□□□ -0.18
PTPN6-204ENST00000456013 PMCHL2Q9BQD1 86 aa13.93□□□□□ -0.18
PTPN6-204ENST00000456013 TIMM8BQ9Y5J9 83 aaPredicted RBP13.93□□□□□ -0.18
PTPN6-204ENST00000456013 MUC21A0A0G2JKD1 596 aa13.93□□□□□ -0.18
PTPN6-204ENST00000456013 MUC21A0A140T8X8 626 aa13.93□□□□□ -0.18
PTPN6-204ENST00000456013 TIMM23O14925 209 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms