RNA–Protein interactions for RNA: ENST00000447995.2

PTPN12-208, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-208ENST00000447995 Q9H3A6 140 aa3.2□□□□□ -1.9
PTPN12-208ENST00000447995 RPP21Q9H633 154 aaKnown RBP3.2□□□□□ -1.9
PTPN12-208ENST00000447995 LPAR2Q9HBW0 351 aa3.2□□□□□ -1.9
PTPN12-208ENST00000447995 ZNF586Q9NXT0 402 aa3.2□□□□□ -1.9
PTPN12-208ENST00000447995 MRPL36Q9P0J6 103 aaKnown RBP3.2□□□□□ -1.9
PTPN12-208ENST00000447995 TBL2Q9Y4P3 447 aaKnown RBP3.2□□□□□ -1.9
PTPN12-208ENST00000447995 KLF12Q9Y4X4 402 aa3.2□□□□□ -1.9
PTPN12-208ENST00000447995 RIF1Q5UIP0 2472 aaKnown RBP3.2□□□□□ -1.9
PTPN12-208ENST00000447995 DIDO1Q9BTC0 2240 aaKnown RBP3.2□□□□□ -1.9
PTPN12-208ENST00000447995 FRYQ5TBA9 3013 aa3.19□□□□□ -1.9
PTPN12-208ENST00000447995 RP1L1Q8IWN7 2480 aaPredicted RBP3.19□□□□□ -1.9
PTPN12-208ENST00000447995 CEP250Q9BV73 2442 aa3.19□□□□□ -1.9
PTPN12-208ENST00000447995 AKAP13Q12802 2813 aa3.19□□□□□ -1.9
PTPN12-208ENST00000447995 A6NNC1 897 aa3.19□□□□□ -1.9
PTPN12-208ENST00000447995 H3BRN7 92 aa3.19□□□□□ -1.9
PTPN12-208ENST00000447995 K7EIM0 57 aa3.19□□□□□ -1.9
PTPN12-208ENST00000447995 GNG7O60262 68 aa3.19□□□□□ -1.9
PTPN12-208ENST00000447995 SCGB1D1O95968 90 aa3.19□□□□□ -1.9
PTPN12-208ENST00000447995 LTAP01374 205 aa3.19□□□□□ -1.9
PTPN12-208ENST00000447995 P01737 135 aa3.19□□□□□ -1.9
PTPN12-208ENST00000447995 IGHV3-48P01763 117 aa3.19□□□□□ -1.9
PTPN12-208ENST00000447995 TCRAP04437 139 aa3.19□□□□□ -1.9
PTPN12-208ENST00000447995 PSG1P11464 419 aa3.19□□□□□ -1.9
PTPN12-208ENST00000447995 TMEM11P17152 192 aa3.19□□□□□ -1.9
PTPN12-208ENST00000447995 CSN1S1P47710 185 aa3.19□□□□□ -1.9
PTPN12-208ENST00000447995 EFNA4P52798 201 aa3.19□□□□□ -1.9
PTPN12-208ENST00000447995 TCL1AP56279 114 aa3.19□□□□□ -1.9
PTPN12-208ENST00000447995 PDE6HQ13956 83 aa3.19□□□□□ -1.9
PTPN12-208ENST00000447995 EBI3Q14213 229 aa3.19□□□□□ -1.9
PTPN12-208ENST00000447995 FAM209BQ5JX69 171 aa3.19□□□□□ -1.9
PTPN12-208ENST00000447995 MRPL54Q6P161 138 aaKnown RBP3.19□□□□□ -1.9
PTPN12-208ENST00000447995 ZNF562Q6V9R5 426 aa3.19□□□□□ -1.9
PTPN12-208ENST00000447995 TMEM136Q6ZRR5 245 aa3.19□□□□□ -1.9
PTPN12-208ENST00000447995 VMO1Q7Z5L0 202 aa3.19□□□□□ -1.9
PTPN12-208ENST00000447995 LURAP1LQ8IV03 231 aa3.19□□□□□ -1.9
PTPN12-208ENST00000447995 TTC9CQ8N5M4 171 aa3.19□□□□□ -1.9
PTPN12-208ENST00000447995 ARL6IP6Q8N6S5 226 aa3.19□□□□□ -1.9
PTPN12-208ENST00000447995 SIGLECL1Q8N7X8 197 aa3.19□□□□□ -1.9
PTPN12-208ENST00000447995 ARPC1AQ92747 370 aa3.19□□□□□ -1.9
PTPN12-208ENST00000447995 RNF125Q96EQ8 232 aa3.19□□□□□ -1.9
PTPN12-208ENST00000447995 NEU1Q99519 415 aa3.19□□□□□ -1.9
PTPN12-208ENST00000447995 TXN2Q99757 166 aa3.19□□□□□ -1.9
PTPN12-208ENST00000447995 SHANK2-AS3Q9BTD1 123 aa3.19□□□□□ -1.9
PTPN12-208ENST00000447995 SLC25A39Q9BZJ4 359 aaPredicted RBP3.19□□□□□ -1.9
PTPN12-208ENST00000447995 GFRA4Q9GZZ7 299 aa3.19□□□□□ -1.9
PTPN12-208ENST00000447995 MRPL27Q9P0M9 148 aaKnown RBP3.19□□□□□ -1.9
PTPN12-208ENST00000447995 NAGKQ9UJ70 344 aa3.19□□□□□ -1.9
PTPN12-208ENST00000447995 ZFP30Q9Y2G7 519 aa3.19□□□□□ -1.9
PTPN12-208ENST00000447995 HILPDAQ9Y5L2 63 aa3.19□□□□□ -1.9
PTPN12-208ENST00000447995 YLPM1P49750 1951 aaKnown RBP3.19□□□□□ -1.9
PTPN12-208ENST00000447995 DSPP15924 2871 aaKnown RBP3.19□□□□□ -1.9
PTPN12-208ENST00000447995 APC2O95996 2303 aa3.19□□□□□ -1.9
PTPN12-208ENST00000447995 ZGRF1Q86YA3 2104 aa3.19□□□□□ -1.9
PTPN12-208ENST00000447995 ACACAQ13085 2346 aa3.18□□□□□ -1.9
PTPN12-208ENST00000447995 IGLV11-55A0A075B6I3 123 aa3.18□□□□□ -1.9
PTPN12-208ENST00000447995 TRBV19A0A075B6N1 114 aa3.18□□□□□ -1.9
PTPN12-208ENST00000447995 IGHV3-21A0A0B4J1V1 117 aa3.18□□□□□ -1.9
PTPN12-208ENST00000447995 TRAV34A0A0B4J273 112 aa3.18□□□□□ -1.9
PTPN12-208ENST00000447995 IGHV2-70DA0A0C4DH43 119 aa3.18□□□□□ -1.9
PTPN12-208ENST00000447995 A0A1B0GW15 77 aa3.18□□□□□ -1.9
PTPN12-208ENST00000447995 WI2-2373I1.2A0A1W2PRP0 233 aa3.18□□□□□ -1.9
PTPN12-208ENST00000447995 GRIFINA4D1Z8 144 aa3.18□□□□□ -1.9
PTPN12-208ENST00000447995 NCBP2LA6PVI3 153 aaKnown RBP3.18□□□□□ -1.9
PTPN12-208ENST00000447995 ZNF705FA8MVS1 300 aaPredicted RBP3.18□□□□□ -1.9
PTPN12-208ENST00000447995 DIRC3C9JPN6 131 aa3.18□□□□□ -1.9
PTPN12-208ENST00000447995 ZNF253O75346 499 aa3.18□□□□□ -1.9
PTPN12-208ENST00000447995 SERF1AO75920 110 aa3.18□□□□□ -1.9
PTPN12-208ENST00000447995 OR2J3O76001 311 aa3.18□□□□□ -1.9
PTPN12-208ENST00000447995 IGKV1-17P01599 117 aa3.18□□□□□ -1.9
PTPN12-208ENST00000447995 HLA-DRB1P01911 266 aa3.18□□□□□ -1.9
PTPN12-208ENST00000447995 IL4P05112 153 aa3.18□□□□□ -1.9
PTPN12-208ENST00000447995 ZNF705DP0CH99 300 aaPredicted RBP3.18□□□□□ -1.9
PTPN12-208ENST00000447995 ZNF705BP0CI00 300 aaPredicted RBP3.18□□□□□ -1.9
PTPN12-208ENST00000447995 APELAP0DMC3 54 aa3.18□□□□□ -1.9
PTPN12-208ENST00000447995 RPL7P18124 248 aaKnown RBP3.18□□□□□ -1.9
PTPN12-208ENST00000447995 RAB4AP20338 218 aa3.18□□□□□ -1.9
PTPN12-208ENST00000447995 SRIP30626 198 aa3.18□□□□□ -1.9
PTPN12-208ENST00000447995 RAB9AP51151 201 aa3.18□□□□□ -1.9
PTPN12-208ENST00000447995 UBE2E1P51965 193 aa3.18□□□□□ -1.9
PTPN12-208ENST00000447995 DLX1P56177 255 aa3.18□□□□□ -1.9
PTPN12-208ENST00000447995 GNG5P63218 68 aa3.18□□□□□ -1.9
PTPN12-208ENST00000447995 HBBP68871 147 aa3.18□□□□□ -1.9
PTPN12-208ENST00000447995 PSG9Q00887 426 aa3.18□□□□□ -1.9
PTPN12-208ENST00000447995 KLRD1Q13241 179 aa3.18□□□□□ -1.9
PTPN12-208ENST00000447995 Q56UQ5 140 aa3.18□□□□□ -1.9
PTPN12-208ENST00000447995 C9orf152Q5JTZ5 239 aa3.18□□□□□ -1.9
PTPN12-208ENST00000447995 C1orf194Q5T5A4 169 aa3.18□□□□□ -1.9
PTPN12-208ENST00000447995 Q6AWC8 147 aa3.18□□□□□ -1.9
PTPN12-208ENST00000447995 PRR27Q6MZM9 219 aa3.18□□□□□ -1.9
PTPN12-208ENST00000447995 RBPMS2Q6ZRY4 209 aaKnown RBP3.18□□□□□ -1.9
PTPN12-208ENST00000447995 C19orf35Q6ZS72 473 aa3.18□□□□□ -1.9
PTPN12-208ENST00000447995 Q86TA4 180 aa3.18□□□□□ -1.9
PTPN12-208ENST00000447995 MRPL52Q86TS9 123 aaKnown RBP3.18□□□□□ -1.9
PTPN12-208ENST00000447995 TMEM256Q8N2U0 113 aa3.18□□□□□ -1.9
PTPN12-208ENST00000447995 Q8N6K4 173 aa3.18□□□□□ -1.9
PTPN12-208ENST00000447995 ZNF491Q8N8L2 437 aa3.18□□□□□ -1.9
PTPN12-208ENST00000447995 TMEM75Q8N9X5 138 aa3.18□□□□□ -1.9
PTPN12-208ENST00000447995 NHLRC2Q8NBF2 726 aa3.18□□□□□ -1.9
PTPN12-208ENST00000447995 NUP35Q8NFH5 326 aa3.18□□□□□ -1.9
PTPN12-208ENST00000447995 VN1R17PQ8TDU5 208 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms