RNA–Protein interactions for RNA: ENST00000447683.2

OTUB1-204, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 2

Gene OTUB1, Length 2,315 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-204ENST00000447683 A0A1W2PRM7 423 aa12.87□□□□□ -0.35
OTUB1-204ENST00000447683 SLC25A5P05141 298 aaKnown RBP12.87□□□□□ -0.35
OTUB1-204ENST00000447683 HOXB4P17483 251 aaPredicted RBP12.87□□□□□ -0.35
OTUB1-204ENST00000447683 HNRNPA3P51991 378 aaKnown RBP12.87□□□□□ -0.35
OTUB1-204ENST00000447683 GNG5P63218 68 aa12.87□□□□□ -0.35
OTUB1-204ENST00000447683 DYNAPQ8N1N2 210 aa12.87□□□□□ -0.35
OTUB1-204ENST00000447683 NHLRC2Q8NBF2 726 aa12.87□□□□□ -0.35
OTUB1-204ENST00000447683 MBD6Q96DN6 1003 aa12.87□□□□□ -0.35
OTUB1-204ENST00000447683 TMEM14CQ9P0S9 112 aa12.87□□□□□ -0.35
OTUB1-204ENST00000447683 ZZEF1O43149 2961 aa12.87□□□□□ -0.35
OTUB1-204ENST00000447683 SNURFLB1AK76 121 aa12.87□□□□□ -0.35
OTUB1-204ENST00000447683 CTRLP40313 264 aa12.87□□□□□ -0.35
OTUB1-204ENST00000447683 LYZP61626 148 aa12.87□□□□□ -0.35
OTUB1-204ENST00000447683 EBI3Q14213 229 aa12.87□□□□□ -0.35
OTUB1-204ENST00000447683 TMEM256Q8N2U0 113 aa12.87□□□□□ -0.35
OTUB1-204ENST00000447683 Q8N6K4 173 aa12.87□□□□□ -0.35
OTUB1-204ENST00000447683 SLC25A39Q9BZJ4 359 aaPredicted RBP12.87□□□□□ -0.35
OTUB1-204ENST00000447683 SIRPDQ9H106 197 aa12.87□□□□□ -0.35
OTUB1-204ENST00000447683 C7orf69Q9H7B7 122 aa12.87□□□□□ -0.35
OTUB1-204ENST00000447683 MT-ND6P03923 174 aa12.86□□□□□ -0.35
OTUB1-204ENST00000447683 SCGB2A2Q13296 93 aa12.86□□□□□ -0.35
OTUB1-204ENST00000447683 HES1Q14469 280 aa12.86□□□□□ -0.35
OTUB1-204ENST00000447683 C5orf17Q8NAS9 161 aa12.86□□□□□ -0.35
OTUB1-204ENST00000447683 PAM16Q9Y3D7 125 aa12.86□□□□□ -0.35
OTUB1-204ENST00000447683 A0A1B0GUS0 222 aa12.85□□□□□ -0.35
OTUB1-204ENST00000447683 EFNA4P52798 201 aa12.85□□□□□ -0.35
OTUB1-204ENST00000447683 ZNF562Q6V9R5 426 aa12.85□□□□□ -0.35
OTUB1-204ENST00000447683 FAM103A1Q9BTL3 118 aaKnown RBP12.85□□□□□ -0.35
OTUB1-204ENST00000447683 UBTD1Q9HAC8 227 aa12.85□□□□□ -0.35
OTUB1-204ENST00000447683 WNK2Q9Y3S1 2297 aa12.85□□□□□ -0.35
OTUB1-204ENST00000447683 NPIPB5A8MRT5 1133 aa12.85□□□□□ -0.35
OTUB1-204ENST00000447683 TMEM136Q6ZRR5 245 aa12.85□□□□□ -0.35
OTUB1-204ENST00000447683 Q9H3A6 140 aa12.85□□□□□ -0.35
OTUB1-204ENST00000447683 SERTAD4Q9NUC0 356 aa12.85□□□□□ -0.35
OTUB1-204ENST00000447683 TP53TG3Q9ULZ0 132 aa12.85□□□□□ -0.35
OTUB1-204ENST00000447683 NCOR2Q9Y618 2525 aa12.85□□□□□ -0.35
OTUB1-204ENST00000447683 IZUMO1RA6ND01 250 aa12.84□□□□□ -0.35
OTUB1-204ENST00000447683 NUPR1O60356 82 aa12.84□□□□□ -0.35
OTUB1-204ENST00000447683 UBE2G1P62253 170 aa12.84□□□□□ -0.35
OTUB1-204ENST00000447683 ASPHD1Q5U4P2 390 aa12.84□□□□□ -0.35
OTUB1-204ENST00000447683 CMTM2Q8TAZ6 248 aa12.84□□□□□ -0.35
OTUB1-204ENST00000447683 FAM168AQ92567 244 aa12.84□□□□□ -0.35
OTUB1-204ENST00000447683 ZNF48Q96MX3 618 aaPredicted RBP12.84□□□□□ -0.35
OTUB1-204ENST00000447683 GRIFINA4D1Z8 144 aa12.84□□□□□ -0.35
OTUB1-204ENST00000447683 HIST1H1EP10412 219 aaKnown RBP12.84□□□□□ -0.35
OTUB1-204ENST00000447683 CRISP2P16562 243 aa12.84□□□□□ -0.35
OTUB1-204ENST00000447683 S100A7P31151 101 aa12.84□□□□□ -0.35
OTUB1-204ENST00000447683 UQCRFS1P47985 274 aa12.84□□□□□ -0.35
OTUB1-204ENST00000447683 TCL1AP56279 114 aa12.84□□□□□ -0.35
OTUB1-204ENST00000447683 FANCD2OSQ96PS1 177 aa12.84□□□□□ -0.35
OTUB1-204ENST00000447683 TXN2Q99757 166 aa12.84□□□□□ -0.35
OTUB1-204ENST00000447683 MLST8Q9BVC4 326 aa12.84□□□□□ -0.35
OTUB1-204ENST00000447683 IGLV11-55A0A075B6I3 123 aa12.83□□□□□ -0.36
OTUB1-204ENST00000447683 IGLC2P0DOY2 106 aa12.83□□□□□ -0.36
OTUB1-204ENST00000447683 IGLC3P0DOY3 106 aa12.83□□□□□ -0.36
OTUB1-204ENST00000447683 Q0VG73 95 aa12.83□□□□□ -0.36
OTUB1-204ENST00000447683 GRAMD2BQ96HH9 432 aa12.83□□□□□ -0.36
OTUB1-204ENST00000447683 GPR82Q96P67 336 aa12.83□□□□□ -0.36
OTUB1-204ENST00000447683 CHRDL1Q9BU40 450 aa12.83□□□□□ -0.36
OTUB1-204ENST00000447683 ZNF586Q9NXT0 402 aa12.83□□□□□ -0.36
OTUB1-204ENST00000447683 SPINK4O60575 86 aa12.83□□□□□ -0.36
OTUB1-204ENST00000447683 TCRAP04437 139 aa12.83□□□□□ -0.36
OTUB1-204ENST00000447683 AMY1AP04745 511 aa12.83□□□□□ -0.36
OTUB1-204ENST00000447683 LINC00310P59036 64 aa12.83□□□□□ -0.36
OTUB1-204ENST00000447683 NIT1Q86X76 327 aa12.83□□□□□ -0.36
OTUB1-204ENST00000447683 TTC9CQ8N5M4 171 aa12.83□□□□□ -0.36
OTUB1-204ENST00000447683 ARPC1AQ92747 370 aa12.83□□□□□ -0.36
OTUB1-204ENST00000447683 FMC1Q96HJ9 113 aa12.83□□□□□ -0.36
OTUB1-204ENST00000447683 SHANK2-AS3Q9BTD1 123 aa12.83□□□□□ -0.36
OTUB1-204ENST00000447683 OTORQ9NRC9 128 aa12.83□□□□□ -0.36
OTUB1-204ENST00000447683 CHD8Q9HCK8 2581 aa12.82□□□□□ -0.36
OTUB1-204ENST00000447683 H3BRN7 92 aa12.82□□□□□ -0.36
OTUB1-204ENST00000447683 CA1P00915 261 aaPredicted RBP12.82□□□□□ -0.36
OTUB1-204ENST00000447683 GNLYP22749 145 aa12.82□□□□□ -0.36
OTUB1-204ENST00000447683 NDPQ00604 133 aa12.82□□□□□ -0.36
OTUB1-204ENST00000447683 VAMP3Q15836 100 aa12.82□□□□□ -0.36
OTUB1-204ENST00000447683 Q6ZN92 141 aa12.82□□□□□ -0.36
OTUB1-204ENST00000447683 ZNF491Q8N8L2 437 aa12.82□□□□□ -0.36
OTUB1-204ENST00000447683 NAT8BQ9UHF3 227 aa12.82□□□□□ -0.36
OTUB1-204ENST00000447683 TBL2Q9Y4P3 447 aaKnown RBP12.82□□□□□ -0.36
OTUB1-204ENST00000447683 C19orf84I3L1E1 186 aa12.82□□□□□ -0.36
OTUB1-204ENST00000447683 SLC35B1P78383 322 aa12.82□□□□□ -0.36
OTUB1-204ENST00000447683 KLF17Q5JT82 389 aaPredicted RBP12.82□□□□□ -0.36
OTUB1-204ENST00000447683 TMEM190Q8WZ59 177 aa12.82□□□□□ -0.36
OTUB1-204ENST00000447683 WI2-2373I1.2A0A1W2PRP0 233 aa12.81□□□□□ -0.36
OTUB1-204ENST00000447683 H3BTX0 84 aa12.81□□□□□ -0.36
OTUB1-204ENST00000447683 LTAP01374 205 aa12.81□□□□□ -0.36
OTUB1-204ENST00000447683 HLA-DQA1P01909 254 aa12.81□□□□□ -0.36
OTUB1-204ENST00000447683 RASL11AQ6T310 242 aa12.81□□□□□ -0.36
OTUB1-204ENST00000447683 Q6ZWC4 215 aa12.81□□□□□ -0.36
OTUB1-204ENST00000447683 WIPF2Q8TF74 440 aaPredicted RBP12.81□□□□□ -0.36
OTUB1-204ENST00000447683 NCBP2LA6PVI3 153 aaKnown RBP12.8□□□□□ -0.36
OTUB1-204ENST00000447683 LMO4P61968 165 aa12.8□□□□□ -0.36
OTUB1-204ENST00000447683 MRPL54Q6P161 138 aaKnown RBP12.8□□□□□ -0.36
OTUB1-204ENST00000447683 TACC2O95359 2948 aa12.8□□□□□ -0.36
OTUB1-204ENST00000447683 UBE2E1P51965 193 aa12.8□□□□□ -0.36
OTUB1-204ENST00000447683 MFAP4P55083 255 aa12.8□□□□□ -0.36
OTUB1-204ENST00000447683 TDRG1Q3Y452 100 aa12.8□□□□□ -0.36
OTUB1-204ENST00000447683 RNF125Q96EQ8 232 aa12.8□□□□□ -0.36
OTUB1-204ENST00000447683 AJUBAQ96IF1 538 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms