RNA–Protein interactions for RNA: ENST00000446046.5

FN1-212, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-212ENST00000446046 GGTLC3B5MD39 225 aa9.62□□□□□ -0.87
FN1-212ENST00000446046 GNB1LQ9BYB4 327 aa9.62□□□□□ -0.87
FN1-212ENST00000446046 PTPRBP23467 1997 aa9.62□□□□□ -0.87
FN1-212ENST00000446046 LINC01619G3V211 115 aa9.61□□□□□ -0.87
FN1-212ENST00000446046 PLA2G2CQ5R387 149 aa9.61□□□□□ -0.87
FN1-212ENST00000446046 PRRC2AP48634 2157 aaKnown RBP9.61□□□□□ -0.87
FN1-212ENST00000446046 PTPRSQ13332 1948 aa9.61□□□□□ -0.87
FN1-212ENST00000446046 MLNRO43193 412 aa9.61□□□□□ -0.87
FN1-212ENST00000446046 C10orf126Q8N4M7 172 aa9.61□□□□□ -0.87
FN1-212ENST00000446046 VCYO14598 125 aa9.61□□□□□ -0.87
FN1-212ENST00000446046 SLAQ13239 276 aa9.61□□□□□ -0.87
FN1-212ENST00000446046 KLRD1Q13241 179 aa9.61□□□□□ -0.87
FN1-212ENST00000446046 IGHV1-69DA0A0B4J2H0 117 aa9.61□□□□□ -0.87
FN1-212ENST00000446046 IGHV1-69P01742 117 aa9.61□□□□□ -0.87
FN1-212ENST00000446046 BRD3OSQ6XYD6 125 aa9.61□□□□□ -0.87
FN1-212ENST00000446046 F8WEM9 126 aa9.6□□□□□ -0.87
FN1-212ENST00000446046 PRDM13Q9H4Q3 707 aa9.6□□□□□ -0.87
FN1-212ENST00000446046 LRRK2Q5S007 2527 aa9.6□□□□□ -0.87
FN1-212ENST00000446046 A0A1B0GUS0 222 aa9.6□□□□□ -0.87
FN1-212ENST00000446046 TMEM238C9JI98 176 aa9.6□□□□□ -0.87
FN1-212ENST00000446046 SMPXQ9UHP9 88 aa9.6□□□□□ -0.87
FN1-212ENST00000446046 KLF2Q9Y5W3 355 aaPredicted RBP9.6□□□□□ -0.87
FN1-212ENST00000446046 IGHV2-70DA0A0C4DH43 119 aa9.6□□□□□ -0.87
FN1-212ENST00000446046 PMS2P5A8MQ11 134 aa9.6□□□□□ -0.87
FN1-212ENST00000446046 RHODO00212 210 aa9.6□□□□□ -0.87
FN1-212ENST00000446046 DAD1P61803 113 aa9.6□□□□□ -0.87
FN1-212ENST00000446046 GAFA1Q96PS6 74 aa9.59□□□□□ -0.87
FN1-212ENST00000446046 LINC00158P58513 81 aa9.59□□□□□ -0.87
FN1-212ENST00000446046 IGKV3D-20A0A0C4DH25 116 aa9.59□□□□□ -0.87
FN1-212ENST00000446046 CHTOPQ9Y3Y2 248 aaKnown RBP9.59□□□□□ -0.87
FN1-212ENST00000446046 TEX43Q6ZNM6 134 aa9.59□□□□□ -0.87
FN1-212ENST00000446046 GATA4P43694 442 aa9.59□□□□□ -0.87
FN1-212ENST00000446046 TSSC4Q9Y5U2 329 aaPredicted RBP9.59□□□□□ -0.87
FN1-212ENST00000446046 GRIFINA4D1Z8 144 aa9.58□□□□□ -0.88
FN1-212ENST00000446046 HOXD3P31249 432 aaPredicted RBP9.58□□□□□ -0.88
FN1-212ENST00000446046 FOXA3P55318 350 aaPredicted RBP9.58□□□□□ -0.88
FN1-212ENST00000446046 SRSF2Q01130 221 aaKnown RBP9.58□□□□□ -0.88
FN1-212ENST00000446046 PRB3Q04118 309 aaPredicted RBP9.58□□□□□ -0.88
FN1-212ENST00000446046 ZNF474Q6S9Z5 364 aaPredicted RBP9.58□□□□□ -0.88
FN1-212ENST00000446046 ZNF562Q6V9R5 426 aa9.58□□□□□ -0.88
FN1-212ENST00000446046 IL17RELQ6ZVW7 336 aa9.58□□□□□ -0.88
FN1-212ENST00000446046 FCN3O75636 299 aa9.58□□□□□ -0.88
FN1-212ENST00000446046 TBX6O95947 436 aaPredicted RBP9.58□□□□□ -0.88
FN1-212ENST00000446046 LINC00614P0C842 121 aa9.58□□□□□ -0.88
FN1-212ENST00000446046 PIP4P1Q86T03 277 aa9.58□□□□□ -0.88
FN1-212ENST00000446046 IGKV1-9A0A0C4DH69 117 aa9.58□□□□□ -0.88
FN1-212ENST00000446046 NPIPB5A8MRT5 1133 aa9.58□□□□□ -0.88
FN1-212ENST00000446046 TSKUQ8WUA8 353 aa9.58□□□□□ -0.88
FN1-212ENST00000446046 J3QRE1 110 aa9.58□□□□□ -0.88
FN1-212ENST00000446046 RPL15P61313 204 aaKnown RBP9.58□□□□□ -0.88
FN1-212ENST00000446046 ADAMTS20P59510 1910 aa9.58□□□□□ -0.88
FN1-212ENST00000446046 IGKV1D-13A0A0B4J2D9 117 aa9.58□□□□□ -0.88
FN1-212ENST00000446046 IGKV1-13P0DP09 117 aa9.58□□□□□ -0.88
FN1-212ENST00000446046 ZNF362Q5T0B9 420 aaPredicted RBP9.58□□□□□ -0.88
FN1-212ENST00000446046 IGF2-ASQ6U949 168 aa9.58□□□□□ -0.88
FN1-212ENST00000446046 RASL10AQ92737 203 aa9.58□□□□□ -0.88
FN1-212ENST00000446046 SPOCK3Q9BQ16 436 aa9.58□□□□□ -0.88
FN1-212ENST00000446046 TRAV12-3A0A0B4J271 114 aa9.57□□□□□ -0.88
FN1-212ENST00000446046 PAX2Q02962 417 aa9.57□□□□□ -0.88
FN1-212ENST00000446046 FBLN7Q53RD9 439 aa9.57□□□□□ -0.88
FN1-212ENST00000446046 PLEKHB2Q96CS7 222 aa9.57□□□□□ -0.88
FN1-212ENST00000446046 COL4A6Q14031 1691 aa9.57□□□□□ -0.88
FN1-212ENST00000446046 Q6ZS49 121 aa9.57□□□□□ -0.88
FN1-212ENST00000446046 NCOR1P1Q9H4R4 102 aa9.57□□□□□ -0.88
FN1-212ENST00000446046 OTX1P32242 354 aaPredicted RBP9.57□□□□□ -0.88
FN1-212ENST00000446046 TEX48A0A1B0GUV7 120 aa9.57□□□□□ -0.88
FN1-212ENST00000446046 EFNB1P98172 346 aa9.57□□□□□ -0.88
FN1-212ENST00000446046 RNASE7Q9H1E1 156 aaKnown RBP9.57□□□□□ -0.88
FN1-212ENST00000446046 LAMTOR2Q9Y2Q5 125 aa9.57□□□□□ -0.88
FN1-212ENST00000446046 COL5A1P20908 1838 aaPredicted RBP9.56□□□□□ -0.88
FN1-212ENST00000446046 SLC17A3O00476 420 aa9.56□□□□□ -0.88
FN1-212ENST00000446046 GATA2P23769 480 aaPredicted RBP9.56□□□□□ -0.88
FN1-212ENST00000446046 C6orf226Q5I0X4 101 aa9.56□□□□□ -0.88
FN1-212ENST00000446046 EDA2RQ9HAV5 297 aa9.56□□□□□ -0.88
FN1-212ENST00000446046 C1orf194Q5T5A4 169 aa9.56□□□□□ -0.88
FN1-212ENST00000446046 ZNF98A6NK75 572 aa9.56□□□□□ -0.88
FN1-212ENST00000446046 ATP5G3P48201 142 aa9.56□□□□□ -0.88
FN1-212ENST00000446046 Q8TCH9 128 aa9.56□□□□□ -0.88
FN1-212ENST00000446046 MS4A6AQ9H2W1 248 aa9.56□□□□□ -0.88
FN1-212ENST00000446046 MST1P26927 711 aa9.56□□□□□ -0.88
FN1-212ENST00000446046 PUSL1Q8N0Z8 303 aaKnown RBP9.56□□□□□ -0.88
FN1-212ENST00000446046 CD177Q8N6Q3 437 aa9.56□□□□□ -0.88
FN1-212ENST00000446046 DNAJC30Q96LL9 226 aa9.56□□□□□ -0.88
FN1-212ENST00000446046 CD55P08174 381 aa9.56□□□□□ -0.88
FN1-212ENST00000446046 FGFBP3Q8TAT2 258 aa9.56□□□□□ -0.88
FN1-212ENST00000446046 REG4Q9BYZ8 158 aa9.56□□□□□ -0.88
FN1-212ENST00000446046 SRP19P09132 144 aaKnown RBP9.56□□□□□ -0.88
FN1-212ENST00000446046 COL8A2P25067 703 aa9.56□□□□□ -0.88
FN1-212ENST00000446046 B3GALT5-AS1P59052 145 aa9.56□□□□□ -0.88
FN1-212ENST00000446046 PSG3Q16557 428 aa9.55□□□□□ -0.88
FN1-212ENST00000446046 PAQR4Q8N4S7 273 aaPredicted RBP9.55□□□□□ -0.88
FN1-212ENST00000446046 CR1LQ2VPA4 569 aa9.55□□□□□ -0.88
FN1-212ENST00000446046 RHPN1-AS1Q9BWJ2 59 aa9.55□□□□□ -0.88
FN1-212ENST00000446046 WDR87Q6ZQQ6 2873 aa9.55□□□□□ -0.88
FN1-212ENST00000446046 M0R2P5 195 aa9.55□□□□□ -0.88
FN1-212ENST00000446046 LEPROTO15243 131 aa9.55□□□□□ -0.88
FN1-212ENST00000446046 GGTLC1Q9BX51 225 aa9.55□□□□□ -0.88
FN1-212ENST00000446046 ZNF561-AS1K7EIQ3 104 aa9.55□□□□□ -0.88
FN1-212ENST00000446046 GNG5P63218 68 aa9.55□□□□□ -0.88
FN1-212ENST00000446046 LINC00527Q9UJ94 153 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms