RNA–Protein interactions for RNA: ENST00000444867.1

SEMA3D-202, Transcript of semaphorin 3D, humanhuman

TSL 1 (best) BASIC

Gene SEMA3D, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-202ENST00000444867 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.7□□□□□ -0.06
SEMA3D-202ENST00000444867 BAGE2Q86Y30 109 aa14.7□□□□□ -0.06
SEMA3D-202ENST00000444867 FAM223AQ8IWN6 122 aa14.7□□□□□ -0.06
SEMA3D-202ENST00000444867 HIST1H2BHQ93079 126 aa14.7□□□□□ -0.06
SEMA3D-202ENST00000444867 HIST1H2BNQ99877 126 aa14.7□□□□□ -0.06
SEMA3D-202ENST00000444867 HIST1H2BMQ99879 126 aa14.7□□□□□ -0.06
SEMA3D-202ENST00000444867 RABAC1Q9UI14 185 aa14.7□□□□□ -0.06
SEMA3D-202ENST00000444867 BMPR1BO00238 502 aa14.7□□□□□ -0.06
SEMA3D-202ENST00000444867 IGHG2P01859 326 aa14.7□□□□□ -0.06
SEMA3D-202ENST00000444867 TCRAP04437 139 aa14.7□□□□□ -0.06
SEMA3D-202ENST00000444867 MGST1P10620 155 aaKnown RBP14.7□□□□□ -0.06
SEMA3D-202ENST00000444867 KRTAP10-9P60411 292 aa14.7□□□□□ -0.06
SEMA3D-202ENST00000444867 FABP9Q0Z7S8 132 aa14.7□□□□□ -0.06
SEMA3D-202ENST00000444867 PDE6HQ13956 83 aa14.7□□□□□ -0.06
SEMA3D-202ENST00000444867 RPEL1Q2QD12 228 aa14.7□□□□□ -0.06
SEMA3D-202ENST00000444867 FAM231DQ6ZW35 169 aa14.7□□□□□ -0.06
SEMA3D-202ENST00000444867 FRZBQ92765 325 aa14.7□□□□□ -0.06
SEMA3D-202ENST00000444867 LINC00479Q96M42 142 aa14.7□□□□□ -0.06
SEMA3D-202ENST00000444867 CHRDL1Q9BU40 450 aa14.7□□□□□ -0.06
SEMA3D-202ENST00000444867 SPG11Q96JI7 2443 aa14.69□□□□□ -0.06
SEMA3D-202ENST00000444867 ZNF320A2RRD8 509 aa14.69□□□□□ -0.06
SEMA3D-202ENST00000444867 H3BUA1 57 aa14.69□□□□□ -0.06
SEMA3D-202ENST00000444867 GPR183P32249 361 aa14.69□□□□□ -0.06
SEMA3D-202ENST00000444867 LY6EQ16553 131 aa14.69□□□□□ -0.06
SEMA3D-202ENST00000444867 IBA57Q5T440 356 aaKnown RBP14.69□□□□□ -0.06
SEMA3D-202ENST00000444867 TRGC1P0CF51 173 aa14.68□□□□□ -0.06
SEMA3D-202ENST00000444867 RPL7P18124 248 aaKnown RBP14.68□□□□□ -0.06
SEMA3D-202ENST00000444867 ATP5G2Q06055 141 aa14.68□□□□□ -0.06
SEMA3D-202ENST00000444867 CMTM2Q8TAZ6 248 aa14.68□□□□□ -0.06
SEMA3D-202ENST00000444867 GPR82Q96P67 336 aa14.68□□□□□ -0.06
SEMA3D-202ENST00000444867 SOX21Q9Y651 276 aaPredicted RBP14.68□□□□□ -0.06
SEMA3D-202ENST00000444867 ASH1LQ9NR48 2969 aaKnown RBP14.67□□□□□ -0.06
SEMA3D-202ENST00000444867 TRAV34A0A0B4J273 112 aa14.67□□□□□ -0.06
SEMA3D-202ENST00000444867 TRBV6-1A0A0K0K1D8 114 aa14.67□□□□□ -0.06
SEMA3D-202ENST00000444867 H3BTX0 84 aa14.67□□□□□ -0.06
SEMA3D-202ENST00000444867 SLC17A3O00476 420 aa14.67□□□□□ -0.06
SEMA3D-202ENST00000444867 TGFAP01135 160 aa14.67□□□□□ -0.06
SEMA3D-202ENST00000444867 CLEC3BP05452 202 aa14.67□□□□□ -0.06
SEMA3D-202ENST00000444867 RAB9AP51151 201 aa14.67□□□□□ -0.06
SEMA3D-202ENST00000444867 AKR1D1P51857 326 aa14.67□□□□□ -0.06
SEMA3D-202ENST00000444867 RPL19P84098 196 aaKnown RBP14.67□□□□□ -0.06
SEMA3D-202ENST00000444867 C9orf152Q5JTZ5 239 aa14.67□□□□□ -0.06
SEMA3D-202ENST00000444867 ACTL10Q5JWF8 245 aa14.67□□□□□ -0.06
SEMA3D-202ENST00000444867 MBD6Q96DN6 1003 aa14.67□□□□□ -0.06
SEMA3D-202ENST00000444867 ZNF414Q96IQ9 312 aa14.67□□□□□ -0.06
SEMA3D-202ENST00000444867 CCDC140Q96MF4 163 aa14.67□□□□□ -0.06
SEMA3D-202ENST00000444867 RNF223E7ERA6 249 aa14.66□□□□□ -0.06
SEMA3D-202ENST00000444867 HOXA5P20719 270 aa14.66□□□□□ -0.06
SEMA3D-202ENST00000444867 NDUFA6P56556 154 aa14.66□□□□□ -0.06
SEMA3D-202ENST00000444867 Q5PR19 223 aa14.66□□□□□ -0.06
SEMA3D-202ENST00000444867 PRSS57Q6UWY2 283 aa14.66□□□□□ -0.06
SEMA3D-202ENST00000444867 SIGLEC15Q6ZMC9 328 aa14.66□□□□□ -0.06
SEMA3D-202ENST00000444867 RNASE7Q9H1E1 156 aaKnown RBP14.66□□□□□ -0.06
SEMA3D-202ENST00000444867 IGHV4-31P0DP07 118 aa14.66□□□□□ -0.06
SEMA3D-202ENST00000444867 MS4A10Q96PG2 267 aa14.66□□□□□ -0.06
SEMA3D-202ENST00000444867 ZFAND3Q9H8U3 227 aa14.66□□□□□ -0.06
SEMA3D-202ENST00000444867 ZNF580Q9UK33 172 aa14.66□□□□□ -0.06
SEMA3D-202ENST00000444867 RPH3ALQ9UNE2 315 aa14.66□□□□□ -0.06
SEMA3D-202ENST00000444867 ANKRD17O75179 2603 aaKnown RBP14.65□□□□□ -0.06
SEMA3D-202ENST00000444867 CR1P17927 2039 aa14.65□□□□□ -0.06
SEMA3D-202ENST00000444867 LTAP01374 205 aa14.65□□□□□ -0.06
SEMA3D-202ENST00000444867 RELQ04864 619 aaPredicted RBP14.65□□□□□ -0.06
SEMA3D-202ENST00000444867 TOMM20LQ6UXN7 152 aa14.65□□□□□ -0.06
SEMA3D-202ENST00000444867 CLEC19AQ6UXS0 136 aa14.65□□□□□ -0.06
SEMA3D-202ENST00000444867 BCL6BQ8N143 479 aaPredicted RBP14.65□□□□□ -0.06
SEMA3D-202ENST00000444867 EXOC3-AS1Q8N2X6 119 aa14.65□□□□□ -0.06
SEMA3D-202ENST00000444867 ARL6IP6Q8N6S5 226 aa14.65□□□□□ -0.06
SEMA3D-202ENST00000444867 MLST8Q9BVC4 326 aa14.65□□□□□ -0.06
SEMA3D-202ENST00000444867 S100A8P05109 93 aa14.64□□□□□ -0.07
SEMA3D-202ENST00000444867 RPL15P61313 204 aaKnown RBP14.64□□□□□ -0.07
SEMA3D-202ENST00000444867 PSG9Q00887 426 aa14.64□□□□□ -0.07
SEMA3D-202ENST00000444867 NHLRC2Q8NBF2 726 aa14.64□□□□□ -0.07
SEMA3D-202ENST00000444867 K7EQM0 130 aa14.63□□□□□ -0.07
SEMA3D-202ENST00000444867 GATCO43716 136 aaKnown RBP14.63□□□□□ -0.07
SEMA3D-202ENST00000444867 ZNF253O75346 499 aa14.63□□□□□ -0.07
SEMA3D-202ENST00000444867 FSHBP01225 129 aa14.63□□□□□ -0.07
SEMA3D-202ENST00000444867 TRGV3P03979 118 aa14.63□□□□□ -0.07
SEMA3D-202ENST00000444867 PPIFP30405 207 aaKnown RBP14.63□□□□□ -0.07
SEMA3D-202ENST00000444867 LINC00518Q8N0U6 118 aa14.63□□□□□ -0.07
SEMA3D-202ENST00000444867 TMEM75Q8N9X5 138 aa14.63□□□□□ -0.07
SEMA3D-202ENST00000444867 C17orf77Q96MU5 243 aa14.63□□□□□ -0.07
SEMA3D-202ENST00000444867 AAMDCQ9H7C9 122 aa14.63□□□□□ -0.07
SEMA3D-202ENST00000444867 ZNF492Q9P255 531 aa14.63□□□□□ -0.07
SEMA3D-202ENST00000444867 NBPF19A0A087WUL8 3843 aa14.63□□□□□ -0.07
SEMA3D-202ENST00000444867 SERTM2A0A1B0GWG4 89 aa14.63□□□□□ -0.07
SEMA3D-202ENST00000444867 SMIM27A0A1W2PRY6 76 aa14.63□□□□□ -0.07
SEMA3D-202ENST00000444867 ZNF705GA8MUZ8 300 aaPredicted RBP14.63□□□□□ -0.07
SEMA3D-202ENST00000444867 CDX1P47902 265 aaPredicted RBP14.63□□□□□ -0.07
SEMA3D-202ENST00000444867 DEFB112Q30KQ8 113 aa14.63□□□□□ -0.07
SEMA3D-202ENST00000444867 COX19Q49B96 90 aa14.63□□□□□ -0.07
SEMA3D-202ENST00000444867 C9orf139Q6ZV77 190 aa14.63□□□□□ -0.07
SEMA3D-202ENST00000444867 Q86TA4 180 aa14.63□□□□□ -0.07
SEMA3D-202ENST00000444867 OR8I2Q8N0Y5 310 aa14.63□□□□□ -0.07
SEMA3D-202ENST00000444867 OR5R1Q8NH85 324 aa14.63□□□□□ -0.07
SEMA3D-202ENST00000444867 USMG5Q96IX5 58 aa14.63□□□□□ -0.07
SEMA3D-202ENST00000444867 GNB4Q9HAV0 340 aa14.63□□□□□ -0.07
SEMA3D-202ENST00000444867 SERTAD4Q9NUC0 356 aa14.63□□□□□ -0.07
SEMA3D-202ENST00000444867 GOLT1AQ6ZVE7 132 aa14.62□□□□□ -0.07
SEMA3D-202ENST00000444867 NUDT10Q8NFP7 164 aa14.62□□□□□ -0.07
SEMA3D-202ENST00000444867 NUDT11Q96G61 164 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms