RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 TRAV9-1A0A075B6T8 112 aa11.29□□□□□ -0.6
SMARCA4-204ENST00000444061 LINC01619G3V211 115 aa11.29□□□□□ -0.6
SMARCA4-204ENST00000444061 ZNF124Q15973 351 aa11.29□□□□□ -0.6
SMARCA4-204ENST00000444061 TPSG1Q9NRR2 321 aa11.29□□□□□ -0.6
SMARCA4-204ENST00000444061 HINT1P49773 126 aaPredicted RBP11.28□□□□□ -0.6
SMARCA4-204ENST00000444061 TWIST1Q15672 202 aa11.28□□□□□ -0.6
SMARCA4-204ENST00000444061 MTURNQ8N3F0 131 aa11.28□□□□□ -0.6
SMARCA4-204ENST00000444061 C15orf62A8K5M9 175 aa11.28□□□□□ -0.6
SMARCA4-204ENST00000444061 GLMPQ8WWB7 406 aa11.28□□□□□ -0.6
SMARCA4-204ENST00000444061 SMIM12Q96EX1 92 aa11.28□□□□□ -0.6
SMARCA4-204ENST00000444061 RHPN1-AS1Q9BWJ2 59 aa11.28□□□□□ -0.6
SMARCA4-204ENST00000444061 OTORQ9NRC9 128 aa11.28□□□□□ -0.6
SMARCA4-204ENST00000444061 WIPF3A6NGB9 483 aa11.28□□□□□ -0.6
SMARCA4-204ENST00000444061 PEX7O00628 323 aa11.28□□□□□ -0.6
SMARCA4-204ENST00000444061 NDPQ00604 133 aa11.28□□□□□ -0.6
SMARCA4-204ENST00000444061 Q1RN00 199 aa11.28□□□□□ -0.6
SMARCA4-204ENST00000444061 SLC25A34Q6PIV7 304 aa11.28□□□□□ -0.6
SMARCA4-204ENST00000444061 PARLQ9H300 379 aa11.28□□□□□ -0.6
SMARCA4-204ENST00000444061 PYYP10082 97 aa11.28□□□□□ -0.6
SMARCA4-204ENST00000444061 FOXL1Q12952 345 aa11.28□□□□□ -0.6
SMARCA4-204ENST00000444061 PRSS1P07477 247 aa11.27□□□□□ -0.61
SMARCA4-204ENST00000444061 A0A1B0GUS0 222 aa11.27□□□□□ -0.61
SMARCA4-204ENST00000444061 ZNF688P0C7X2 276 aa11.27□□□□□ -0.61
SMARCA4-204ENST00000444061 MLANAQ16655 118 aa11.27□□□□□ -0.61
SMARCA4-204ENST00000444061 C11orf71Q6IPW1 123 aa11.27□□□□□ -0.61
SMARCA4-204ENST00000444061 AGMATQ9BSE5 352 aa11.27□□□□□ -0.61
SMARCA4-204ENST00000444061 FBLL1A6NHQ2 334 aaKnown RBP11.26□□□□□ -0.61
SMARCA4-204ENST00000444061 CSN3P07498 182 aa11.26□□□□□ -0.61
SMARCA4-204ENST00000444061 DNLZQ5SXM8 178 aa11.26□□□□□ -0.61
SMARCA4-204ENST00000444061 SLC25A39Q9BZJ4 359 aaPredicted RBP11.26□□□□□ -0.61
SMARCA4-204ENST00000444061 FABP2P12104 132 aa11.26□□□□□ -0.61
SMARCA4-204ENST00000444061 EMP1P54849 157 aa11.26□□□□□ -0.61
SMARCA4-204ENST00000444061 GCSAMLQ5JQS6 135 aa11.26□□□□□ -0.61
SMARCA4-204ENST00000444061 LYPD6Q86Y78 171 aa11.26□□□□□ -0.61
SMARCA4-204ENST00000444061 DYSFO75923 2080 aa11.26□□□□□ -0.61
SMARCA4-204ENST00000444061 Q8N7P7 452 aa11.26□□□□□ -0.61
SMARCA4-204ENST00000444061 OR11H1Q8NG94 326 aa11.26□□□□□ -0.61
SMARCA4-204ENST00000444061 SCRT1Q9BWW7 348 aa11.26□□□□□ -0.61
SMARCA4-204ENST00000444061 SIRPDQ9H106 197 aa11.26□□□□□ -0.61
SMARCA4-204ENST00000444061 COLCA2A8K830 154 aa11.26□□□□□ -0.61
SMARCA4-204ENST00000444061 CENPWQ5EE01 88 aa11.26□□□□□ -0.61
SMARCA4-204ENST00000444061 TOMM40O96008 361 aa11.25□□□□□ -0.61
SMARCA4-204ENST00000444061 SRRM4A7MD48 611 aaKnown RBP11.25□□□□□ -0.61
SMARCA4-204ENST00000444061 NPIPB5A8MRT5 1133 aa11.25□□□□□ -0.61
SMARCA4-204ENST00000444061 C9JCJ5 164 aa11.25□□□□□ -0.61
SMARCA4-204ENST00000444061 ARL6IP6Q8N6S5 226 aa11.25□□□□□ -0.61
SMARCA4-204ENST00000444061 IGFBPL1Q8WX77 278 aa11.25□□□□□ -0.61
SMARCA4-204ENST00000444061 PMS2P5A8MQ11 134 aa11.25□□□□□ -0.61
SMARCA4-204ENST00000444061 OVOL1O14753 267 aa11.25□□□□□ -0.61
SMARCA4-204ENST00000444061 RNF224P0DH78 156 aa11.25□□□□□ -0.61
SMARCA4-204ENST00000444061 POU2AF1Q16633 256 aa11.25□□□□□ -0.61
SMARCA4-204ENST00000444061 CHD7Q9P2D1 2997 aa11.25□□□□□ -0.61
SMARCA4-204ENST00000444061 OR11H12B2RN74 326 aa11.25□□□□□ -0.61
SMARCA4-204ENST00000444061 RNASE4P34096 147 aaKnown RBP11.25□□□□□ -0.61
SMARCA4-204ENST00000444061 PLP1P60201 277 aa11.25□□□□□ -0.61
SMARCA4-204ENST00000444061 JOSD1Q15040 202 aaPredicted RBP11.25□□□□□ -0.61
SMARCA4-204ENST00000444061 SFRP2Q96HF1 295 aa11.25□□□□□ -0.61
SMARCA4-204ENST00000444061 SDF2L1Q9HCN8 221 aa11.25□□□□□ -0.61
SMARCA4-204ENST00000444061 LEPP41159 167 aa11.24□□□□□ -0.61
SMARCA4-204ENST00000444061 MIEN1Q9BRT3 115 aa11.24□□□□□ -0.61
SMARCA4-204ENST00000444061 TMEM50AO95807 157 aa11.24□□□□□ -0.61
SMARCA4-204ENST00000444061 IGKV1-39P01597 117 aa11.24□□□□□ -0.61
SMARCA4-204ENST00000444061 IGKV1D-39P04432 117 aa11.24□□□□□ -0.61
SMARCA4-204ENST00000444061 MGST2Q99735 147 aa11.24□□□□□ -0.61
SMARCA4-204ENST00000444061 WFDC1Q9HC57 220 aa11.24□□□□□ -0.61
SMARCA4-204ENST00000444061 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.24□□□□□ -0.61
SMARCA4-204ENST00000444061 TRAV5A0A0B4J249 113 aa11.24□□□□□ -0.61
SMARCA4-204ENST00000444061 IGHV4-31P0DP07 118 aa11.24□□□□□ -0.61
SMARCA4-204ENST00000444061 TMEM242Q9NWH2 141 aa11.24□□□□□ -0.61
SMARCA4-204ENST00000444061 LEPROTL1O95214 131 aa11.24□□□□□ -0.61
SMARCA4-204ENST00000444061 BTF3P20290 206 aaKnown RBP11.24□□□□□ -0.61
SMARCA4-204ENST00000444061 ASIPP42127 132 aa11.24□□□□□ -0.61
SMARCA4-204ENST00000444061 HERVK_113P61574 105 aa11.24□□□□□ -0.61
SMARCA4-204ENST00000444061 FAM74A4Q5TZK3 123 aa11.24□□□□□ -0.61
SMARCA4-204ENST00000444061 C9orf139Q6ZV77 190 aa11.24□□□□□ -0.61
SMARCA4-204ENST00000444061 FOXC2Q99958 501 aa11.24□□□□□ -0.61
SMARCA4-204ENST00000444061 MCRIP2Q9BUT9 160 aaKnown RBP11.24□□□□□ -0.61
SMARCA4-204ENST00000444061 RANBP2P49792 3224 aaKnown RBP11.23□□□□□ -0.61
SMARCA4-204ENST00000444061 DOCK11Q5JSL3 2073 aa11.23□□□□□ -0.61
SMARCA4-204ENST00000444061 ATP5G3P48201 142 aa11.23□□□□□ -0.61
SMARCA4-204ENST00000444061 A0A1B0GW64 132 aa11.23□□□□□ -0.61
SMARCA4-204ENST00000444061 A0A1W2PRE2 83 aa11.23□□□□□ -0.61
SMARCA4-204ENST00000444061 BLCAPP62952 87 aa11.23□□□□□ -0.61
SMARCA4-204ENST00000444061 WT1-ASQ06250 92 aa11.23□□□□□ -0.61
SMARCA4-204ENST00000444061 FMC1Q96HJ9 113 aa11.23□□□□□ -0.61
SMARCA4-204ENST00000444061 FNDC10F2Z333 226 aa11.23□□□□□ -0.61
SMARCA4-204ENST00000444061 HTN3P15516 51 aa11.23□□□□□ -0.61
SMARCA4-204ENST00000444061 CTAG1AP78358 180 aa11.23□□□□□ -0.61
SMARCA4-204ENST00000444061 ARHGAP21Q5T5U3 1957 aa11.23□□□□□ -0.61
SMARCA4-204ENST00000444061 IGLV1-47P01700 117 aa11.23□□□□□ -0.61
SMARCA4-204ENST00000444061 TMEM170AQ8WVE7 144 aa11.23□□□□□ -0.61
SMARCA4-204ENST00000444061 TSSC4Q9Y5U2 329 aaPredicted RBP11.23□□□□□ -0.61
SMARCA4-204ENST00000444061 H3BUA1 57 aa11.22□□□□□ -0.61
SMARCA4-204ENST00000444061 TMEM95Q3KNT9 176 aa11.22□□□□□ -0.61
SMARCA4-204ENST00000444061 PGLYRP4Q96LB8 373 aa11.22□□□□□ -0.61
SMARCA4-204ENST00000444061 SCO2A0A1W2PP80 73 aa11.22□□□□□ -0.61
SMARCA4-204ENST00000444061 FSTL3O95633 263 aa11.22□□□□□ -0.61
SMARCA4-204ENST00000444061 CD5LO43866 347 aa11.21□□□□□ -0.61
SMARCA4-204ENST00000444061 DMRTA1Q5VZB9 504 aa11.21□□□□□ -0.61
SMARCA4-204ENST00000444061 JMJD1CQ15652 2540 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms