RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 ZNF324BQ6AW86 544 aaPredicted RBP3.67□□□□□ -1.82
HMGB3P9-201ENST00000441799 Q75L30 129 aa3.67□□□□□ -1.82
HMGB3P9-201ENST00000441799 DRAM1Q8N682 238 aa3.67□□□□□ -1.82
HMGB3P9-201ENST00000441799 GVQW1Q8N7I0 195 aa3.67□□□□□ -1.82
HMGB3P9-201ENST00000441799 C15orf53Q8NAA6 179 aa3.67□□□□□ -1.82
HMGB3P9-201ENST00000441799 OR52N5Q8NH56 324 aa3.67□□□□□ -1.82
HMGB3P9-201ENST00000441799 BRK1Q8WUW1 75 aa3.67□□□□□ -1.82
HMGB3P9-201ENST00000441799 C18orf15Q96N68 181 aa3.67□□□□□ -1.82
HMGB3P9-201ENST00000441799 PRR25Q96S07 402 aa3.67□□□□□ -1.82
HMGB3P9-201ENST00000441799 RHNO1Q9BSD3 238 aa3.67□□□□□ -1.82
HMGB3P9-201ENST00000441799 DEFB127Q9H1M4 99 aa3.67□□□□□ -1.82
HMGB3P9-201ENST00000441799 FAM60AQ9NP50 221 aa3.67□□□□□ -1.82
HMGB3P9-201ENST00000441799 SCRT2Q9NQ03 307 aa3.67□□□□□ -1.82
HMGB3P9-201ENST00000441799 Q9Y3F1 56 aa3.67□□□□□ -1.82
HMGB3P9-201ENST00000441799 ZNF236Q9UL36 1845 aa3.67□□□□□ -1.82
HMGB3P9-201ENST00000441799 DMXL1Q9Y485 3027 aa3.67□□□□□ -1.82
HMGB3P9-201ENST00000441799 NCOR2Q9Y618 2525 aa3.67□□□□□ -1.82
HMGB3P9-201ENST00000441799 MGAMO43451 1857 aa3.67□□□□□ -1.82
HMGB3P9-201ENST00000441799 CKAP5Q14008 2032 aa3.66□□□□□ -1.82
HMGB3P9-201ENST00000441799 CCDC88CQ9P219 2028 aa3.66□□□□□ -1.82
HMGB3P9-201ENST00000441799 FRYLO94915 3013 aa3.66□□□□□ -1.82
HMGB3P9-201ENST00000441799 TRAV9-1A0A075B6T8 112 aa3.66□□□□□ -1.82
HMGB3P9-201ENST00000441799 TRGV5A0A0B4J1U4 118 aa3.66□□□□□ -1.82
HMGB3P9-201ENST00000441799 IGHV1-58A0A0C4DH39 117 aa3.66□□□□□ -1.82
HMGB3P9-201ENST00000441799 TMEM272A0A1B0GTI8 110 aa3.66□□□□□ -1.82
HMGB3P9-201ENST00000441799 FAM24AA6NFZ4 105 aa3.66□□□□□ -1.82
HMGB3P9-201ENST00000441799 H3BT86 120 aa3.66□□□□□ -1.82
HMGB3P9-201ENST00000441799 CCL22O00626 93 aa3.66□□□□□ -1.82
HMGB3P9-201ENST00000441799 NUPR1O60356 82 aa3.66□□□□□ -1.82
HMGB3P9-201ENST00000441799 SOD1P00441 154 aa3.66□□□□□ -1.82
HMGB3P9-201ENST00000441799 IGLV3-25P01717 112 aa3.66□□□□□ -1.82
HMGB3P9-201ENST00000441799 PIRTP0C851 137 aa3.66□□□□□ -1.82
HMGB3P9-201ENST00000441799 C3orf79P0CE67 100 aa3.66□□□□□ -1.82
HMGB3P9-201ENST00000441799 PTHLHP12272 177 aa3.66□□□□□ -1.82
HMGB3P9-201ENST00000441799 CRISP2P16562 243 aa3.66□□□□□ -1.82
HMGB3P9-201ENST00000441799 COL8A2P25067 703 aa3.66□□□□□ -1.82
HMGB3P9-201ENST00000441799 FAUP35544 74 aaKnown RBP3.66□□□□□ -1.82
HMGB3P9-201ENST00000441799 MPV17P39210 176 aa3.66□□□□□ -1.82
HMGB3P9-201ENST00000441799 MYCNOSP40205 109 aa3.66□□□□□ -1.82
HMGB3P9-201ENST00000441799 MTPNP58546 118 aa3.66□□□□□ -1.82
HMGB3P9-201ENST00000441799 KRTDAPP60985 99 aa3.66□□□□□ -1.82
HMGB3P9-201ENST00000441799 RPL38P63173 70 aaKnown RBP3.66□□□□□ -1.82
HMGB3P9-201ENST00000441799 CYCSP99999 105 aaKnown RBP3.66□□□□□ -1.82
HMGB3P9-201ENST00000441799 SRSF9Q13242 221 aaKnown RBP eCLIP3.66□□□□□ -1.82
HMGB3P9-201ENST00000441799 RIGQ13278 110 aa3.66□□□□□ -1.82
HMGB3P9-201ENST00000441799 PIK3CD-AS1Q5SR53 167 aa3.66□□□□□ -1.82
HMGB3P9-201ENST00000441799 KTN1-AS1Q86SY8 53 aa3.66□□□□□ -1.82
HMGB3P9-201ENST00000441799 TEN1Q86WV5 123 aa3.66□□□□□ -1.82
HMGB3P9-201ENST00000441799 PCP2Q8IVA1 136 aa3.66□□□□□ -1.82
HMGB3P9-201ENST00000441799 SBSPONQ8IVN8 264 aa3.66□□□□□ -1.82
HMGB3P9-201ENST00000441799 RNF182Q8N6D2 247 aa3.66□□□□□ -1.82
HMGB3P9-201ENST00000441799 CYB561D1Q8N8Q1 229 aa3.66□□□□□ -1.82
HMGB3P9-201ENST00000441799 NEXN-AS1Q8NBZ9 246 aa3.66□□□□□ -1.82
HMGB3P9-201ENST00000441799 OR2T10Q8NGZ9 312 aa3.66□□□□□ -1.82
HMGB3P9-201ENST00000441799 LSM10Q969L4 123 aaKnown RBP3.66□□□□□ -1.82
HMGB3P9-201ENST00000441799 ZNF689Q96CS4 500 aaPredicted RBP3.66□□□□□ -1.82
HMGB3P9-201ENST00000441799 PRSS27Q9BQR3 290 aa3.66□□□□□ -1.82
HMGB3P9-201ENST00000441799 TMEM204Q9BSN7 226 aa3.66□□□□□ -1.82
HMGB3P9-201ENST00000441799 CST11Q9H112 138 aa3.66□□□□□ -1.82
HMGB3P9-201ENST00000441799 CXCL16Q9H2A7 254 aa3.66□□□□□ -1.82
HMGB3P9-201ENST00000441799 SDF2L1Q9HCN8 221 aa3.66□□□□□ -1.82
HMGB3P9-201ENST00000441799 TNFRSF19Q9NS68 423 aa3.66□□□□□ -1.82
HMGB3P9-201ENST00000441799 DEPPQ9NTK1 212 aa3.66□□□□□ -1.82
HMGB3P9-201ENST00000441799 TP53TG3Q9ULZ0 132 aa3.66□□□□□ -1.82
HMGB3P9-201ENST00000441799 ZNF835Q9Y2P0 537 aa3.66□□□□□ -1.82
HMGB3P9-201ENST00000441799 MICAL3Q7RTP6 2002 aa3.66□□□□□ -1.82
HMGB3P9-201ENST00000441799 MAST4O15021 2626 aa3.66□□□□□ -1.82
HMGB3P9-201ENST00000441799 MIA3Q5JRA6 1907 aa3.66□□□□□ -1.82
HMGB3P9-201ENST00000441799 PLXNB2O15031 1838 aa3.65□□□□□ -1.82
HMGB3P9-201ENST00000441799 PDCD11Q14690 1871 aaKnown RBP3.65□□□□□ -1.82
HMGB3P9-201ENST00000441799 NUP210Q8TEM1 1887 aaPredicted RBP3.65□□□□□ -1.82
HMGB3P9-201ENST00000441799 CACNA1IQ9P0X4 2223 aa3.65□□□□□ -1.83
HMGB3P9-201ENST00000441799 M0R129 80 aa3.65□□□□□ -1.83
HMGB3P9-201ENST00000441799 FXYD1O00168 92 aa3.65□□□□□ -1.83
HMGB3P9-201ENST00000441799 WISP2O76076 250 aa3.65□□□□□ -1.83
HMGB3P9-201ENST00000441799 CD55P08174 381 aa3.65□□□□□ -1.83
HMGB3P9-201ENST00000441799 HLA-DRB4P13762 266 aa3.65□□□□□ -1.83
HMGB3P9-201ENST00000441799 CD52P31358 61 aa3.65□□□□□ -1.83
HMGB3P9-201ENST00000441799 CXCL5P42830 114 aa3.65□□□□□ -1.83
HMGB3P9-201ENST00000441799 SUMO2P61956 95 aaKnown RBP3.65□□□□□ -1.83
HMGB3P9-201ENST00000441799 FUT5Q11128 374 aa3.65□□□□□ -1.83
HMGB3P9-201ENST00000441799 CDK5R1Q15078 307 aa3.65□□□□□ -1.83
HMGB3P9-201ENST00000441799 CENPWQ5EE01 88 aa3.65□□□□□ -1.83
HMGB3P9-201ENST00000441799 CFAP126Q5VTH2 177 aa3.65□□□□□ -1.83
HMGB3P9-201ENST00000441799 UNQ9165/PRO28630Q6UXU0 137 aa3.65□□□□□ -1.83
HMGB3P9-201ENST00000441799 RFLNAQ6ZTI6 216 aa3.65□□□□□ -1.83
HMGB3P9-201ENST00000441799 FAM57BQ71RH2 274 aa3.65□□□□□ -1.83
HMGB3P9-201ENST00000441799 LINC00305Q7Z4B0 112 aa3.65□□□□□ -1.83
HMGB3P9-201ENST00000441799 VN1R4Q7Z5H5 301 aa3.65□□□□□ -1.83
HMGB3P9-201ENST00000441799 WDR86Q86TI4 376 aa3.65□□□□□ -1.83
HMGB3P9-201ENST00000441799 SLC22A24Q8N4F4 322 aa3.65□□□□□ -1.83
HMGB3P9-201ENST00000441799 POM121L12Q8N7R1 296 aa3.65□□□□□ -1.83
HMGB3P9-201ENST00000441799 NRACQ8N912 160 aa3.65□□□□□ -1.83
HMGB3P9-201ENST00000441799 TMEM230Q96A57 120 aa3.65□□□□□ -1.83
HMGB3P9-201ENST00000441799 RBMXL1Q96E39 390 aaKnown RBP3.65□□□□□ -1.83
HMGB3P9-201ENST00000441799 LINC01600Q96MT4 127 aa3.65□□□□□ -1.83
HMGB3P9-201ENST00000441799 METTL26Q96S19 204 aa3.65□□□□□ -1.83
HMGB3P9-201ENST00000441799 PAXXQ9BUH6 204 aa3.65□□□□□ -1.83
HMGB3P9-201ENST00000441799 ANAPC10Q9UM13 185 aa3.65□□□□□ -1.83
HMGB3P9-201ENST00000441799 ZNF256Q9Y2P7 627 aaPredicted RBP3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms