RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 SAA4P35542 130 aa7.2□□□□□ -1.26
HDAC6-209ENST00000440653 MFAP4P55083 255 aa7.2□□□□□ -1.26
HDAC6-209ENST00000440653 PRB3Q04118 309 aaPredicted RBP7.2□□□□□ -1.26
HDAC6-209ENST00000440653 PDE6HQ13956 83 aa7.2□□□□□ -1.26
HDAC6-209ENST00000440653 TMEM183BQ1AE95 376 aa7.2□□□□□ -1.26
HDAC6-209ENST00000440653 IBA57Q5T440 356 aaKnown RBP7.2□□□□□ -1.26
HDAC6-209ENST00000440653 MORN5Q5VZ52 161 aa7.2□□□□□ -1.26
HDAC6-209ENST00000440653 BPIFA4PQ86YQ2 179 aa7.2□□□□□ -1.26
HDAC6-209ENST00000440653 LYPD1Q8N2G4 141 aa7.2□□□□□ -1.26
HDAC6-209ENST00000440653 OR5T1Q8NG75 326 aa7.2□□□□□ -1.26
HDAC6-209ENST00000440653 OR4F17Q8NGA8 305 aa7.2□□□□□ -1.26
HDAC6-209ENST00000440653 FAM110DQ8TAY7 271 aaPredicted RBP7.2□□□□□ -1.26
HDAC6-209ENST00000440653 FRZBQ92765 325 aa7.2□□□□□ -1.26
HDAC6-209ENST00000440653 RNF125Q96EQ8 232 aa7.2□□□□□ -1.26
HDAC6-209ENST00000440653 ATP6V0BQ99437 205 aa7.2□□□□□ -1.26
HDAC6-209ENST00000440653 SHANK2-AS3Q9BTD1 123 aa7.2□□□□□ -1.26
HDAC6-209ENST00000440653 SLC25A39Q9BZJ4 359 aaPredicted RBP7.2□□□□□ -1.26
HDAC6-209ENST00000440653 OTORQ9NRC9 128 aa7.2□□□□□ -1.26
HDAC6-209ENST00000440653 DMRT1Q9Y5R6 373 aa7.2□□□□□ -1.26
HDAC6-209ENST00000440653 TRBV6-1A0A0K0K1D8 114 aa7.19□□□□□ -1.26
HDAC6-209ENST00000440653 SERTM2A0A1B0GWG4 89 aa7.19□□□□□ -1.26
HDAC6-209ENST00000440653 PGPEP1LA6NFU8 196 aa7.19□□□□□ -1.26
HDAC6-209ENST00000440653 NCBP2LA6PVI3 153 aaKnown RBP7.19□□□□□ -1.26
HDAC6-209ENST00000440653 FCN1O00602 326 aa7.19□□□□□ -1.26
HDAC6-209ENST00000440653 NDUFS7O75251 213 aa7.19□□□□□ -1.26
HDAC6-209ENST00000440653 IGKV1-17P01599 117 aa7.19□□□□□ -1.26
HDAC6-209ENST00000440653 SLC25A5P05141 298 aaKnown RBP7.19□□□□□ -1.26
HDAC6-209ENST00000440653 NBEAP1P0C6P0 100 aa7.19□□□□□ -1.26
HDAC6-209ENST00000440653 HIST1H1EP10412 219 aaKnown RBP7.19□□□□□ -1.26
HDAC6-209ENST00000440653 PAX1P15863 534 aa7.19□□□□□ -1.26
HDAC6-209ENST00000440653 RAB9AP51151 201 aa7.19□□□□□ -1.26
HDAC6-209ENST00000440653 NDUFA6P56556 154 aa7.19□□□□□ -1.26
HDAC6-209ENST00000440653 CX3CL1P78423 397 aa7.19□□□□□ -1.26
HDAC6-209ENST00000440653 CT83Q5H943 113 aa7.19□□□□□ -1.26
HDAC6-209ENST00000440653 RASL11AQ6T310 242 aa7.19□□□□□ -1.26
HDAC6-209ENST00000440653 HIST3H2BBQ8N257 126 aa7.19□□□□□ -1.26
HDAC6-209ENST00000440653 ARL6IP6Q8N6S5 226 aa7.19□□□□□ -1.26
HDAC6-209ENST00000440653 VN1R17PQ8TDU5 208 aa7.19□□□□□ -1.26
HDAC6-209ENST00000440653 C10orf105Q8TEF2 133 aa7.19□□□□□ -1.26
HDAC6-209ENST00000440653 C21orf62Q9NYP8 219 aa7.19□□□□□ -1.26
HDAC6-209ENST00000440653 MRPL27Q9P0M9 148 aaKnown RBP7.19□□□□□ -1.26
HDAC6-209ENST00000440653 MOB4Q9Y3A3 225 aa7.19□□□□□ -1.26
HDAC6-209ENST00000440653 V9GYV3 84 aa7.19□□□□□ -1.26
HDAC6-209ENST00000440653 IGHV7-81A0A0B4J1V7 117 aa7.18□□□□□ -1.26
HDAC6-209ENST00000440653 TRAV5A0A0B4J249 113 aa7.18□□□□□ -1.26
HDAC6-209ENST00000440653 A0A0U1RQK1 487 aa7.18□□□□□ -1.26
HDAC6-209ENST00000440653 A0A1W2PRD5 423 aa7.18□□□□□ -1.26
HDAC6-209ENST00000440653 A0A1W2PRF3 423 aa7.18□□□□□ -1.26
HDAC6-209ENST00000440653 A0A1W2PRM7 423 aa7.18□□□□□ -1.26
HDAC6-209ENST00000440653 ZNF320A2RRD8 509 aa7.18□□□□□ -1.26
HDAC6-209ENST00000440653 FBLL1A6NHQ2 334 aaKnown RBP7.18□□□□□ -1.26
HDAC6-209ENST00000440653 VWC2LB2RUY7 222 aa7.18□□□□□ -1.26
HDAC6-209ENST00000440653 K7EQM0 130 aa7.18□□□□□ -1.26
HDAC6-209ENST00000440653 IGHV3-48P01763 117 aa7.18□□□□□ -1.26
HDAC6-209ENST00000440653 APELAP0DMC3 54 aa7.18□□□□□ -1.26
HDAC6-209ENST00000440653 GATA3P23771 443 aa7.18□□□□□ -1.26
HDAC6-209ENST00000440653 RPL15P61313 204 aaKnown RBP7.18□□□□□ -1.26
HDAC6-209ENST00000440653 NDPQ00604 133 aa7.18□□□□□ -1.26
HDAC6-209ENST00000440653 PAX8Q06710 450 aa7.18□□□□□ -1.26
HDAC6-209ENST00000440653 ZNF600Q6ZNG1 722 aa7.18□□□□□ -1.26
HDAC6-209ENST00000440653 DYNAPQ8N1N2 210 aa7.18□□□□□ -1.26
HDAC6-209ENST00000440653 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.18□□□□□ -1.26
HDAC6-209ENST00000440653 Q8N9W7 124 aa7.18□□□□□ -1.26
HDAC6-209ENST00000440653 Q9H3A6 140 aa7.18□□□□□ -1.26
HDAC6-209ENST00000440653 ZNF492Q9P255 531 aa7.18□□□□□ -1.26
HDAC6-209ENST00000440653 EPDR1Q9UM22 224 aa7.18□□□□□ -1.26
HDAC6-209ENST00000440653 KLF12Q9Y4X4 402 aa7.18□□□□□ -1.26
HDAC6-209ENST00000440653 PLXNB1O43157 2135 aa7.18□□□□□ -1.26
HDAC6-209ENST00000440653 VWFP04275 2813 aa7.17□□□□□ -1.26
HDAC6-209ENST00000440653 WI2-2373I1.2A0A1W2PRP0 233 aa7.17□□□□□ -1.26
HDAC6-209ENST00000440653 IGLV2-8P01709 118 aa7.17□□□□□ -1.26
HDAC6-209ENST00000440653 HLA-DQA1P01909 254 aa7.17□□□□□ -1.26
HDAC6-209ENST00000440653 IL4P05112 153 aa7.17□□□□□ -1.26
HDAC6-209ENST00000440653 MGST1P10620 155 aaKnown RBP7.17□□□□□ -1.26
HDAC6-209ENST00000440653 SLC25A16P16260 332 aa7.17□□□□□ -1.26
HDAC6-209ENST00000440653 CRIP2P52943 208 aaPredicted RBP7.17□□□□□ -1.26
HDAC6-209ENST00000440653 Q56UQ5 140 aa7.17□□□□□ -1.26
HDAC6-209ENST00000440653 ASPHD1Q5U4P2 390 aa7.17□□□□□ -1.26
HDAC6-209ENST00000440653 C19orf35Q6ZS72 473 aa7.17□□□□□ -1.26
HDAC6-209ENST00000440653 Q86TA4 180 aa7.17□□□□□ -1.26
HDAC6-209ENST00000440653 CMTM2Q8TAZ6 248 aa7.17□□□□□ -1.26
HDAC6-209ENST00000440653 GPR82Q96P67 336 aa7.17□□□□□ -1.26
HDAC6-209ENST00000440653 FANCD2OSQ96PS1 177 aa7.17□□□□□ -1.26
HDAC6-209ENST00000440653 GNB1LQ9BYB4 327 aa7.17□□□□□ -1.26
HDAC6-209ENST00000440653 TRAPPC1Q9Y5R8 145 aa7.17□□□□□ -1.26
HDAC6-209ENST00000440653 SOX21Q9Y651 276 aaPredicted RBP7.17□□□□□ -1.26
HDAC6-209ENST00000440653 IGHV1-69DA0A0B4J2H0 117 aa7.16□□□□□ -1.26
HDAC6-209ENST00000440653 SMIM27A0A1W2PRY6 76 aa7.16□□□□□ -1.26
HDAC6-209ENST00000440653 XKRY2A2RUG3 117 aa7.16□□□□□ -1.26
HDAC6-209ENST00000440653 M0QZK8 103 aa7.16□□□□□ -1.26
HDAC6-209ENST00000440653 BMPR1BO00238 502 aa7.16□□□□□ -1.26
HDAC6-209ENST00000440653 ZNF253O75346 499 aa7.16□□□□□ -1.26
HDAC6-209ENST00000440653 NDUFB8O95169 186 aa7.16□□□□□ -1.26
HDAC6-209ENST00000440653 LTAP01374 205 aa7.16□□□□□ -1.26
HDAC6-209ENST00000440653 IGHV1-69P01742 117 aa7.16□□□□□ -1.26
HDAC6-209ENST00000440653 TCRAP04437 139 aa7.16□□□□□ -1.26
HDAC6-209ENST00000440653 AMY1AP04745 511 aa7.16□□□□□ -1.26
HDAC6-209ENST00000440653 IGLC2P0DOY2 106 aa7.16□□□□□ -1.26
HDAC6-209ENST00000440653 RPL7P18124 248 aaKnown RBP7.16□□□□□ -1.26
HDAC6-209ENST00000440653 HNF1AP20823 631 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms