RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 OR10W1Q8NGF6 305 aa6.88□□□□□ -1.31
HPS4-206ENST00000439453 TMUB1Q9BVT8 246 aa6.88□□□□□ -1.31
HPS4-206ENST00000439453 PRSS22Q9GZN4 317 aa6.88□□□□□ -1.31
HPS4-206ENST00000439453 PRR14LQ5THK1 2151 aa6.88□□□□□ -1.31
HPS4-206ENST00000439453 MYCNOSP40205 109 aa6.87□□□□□ -1.31
HPS4-206ENST00000439453 PATE2Q6UY27 113 aa6.87□□□□□ -1.31
HPS4-206ENST00000439453 ZNRF1Q8ND25 227 aa6.87□□□□□ -1.31
HPS4-206ENST00000439453 OR1L4Q8NGR5 311 aa6.87□□□□□ -1.31
HPS4-206ENST00000439453 CACNG8Q8WXS5 425 aa6.87□□□□□ -1.31
HPS4-206ENST00000439453 GPR82Q96P67 336 aa6.87□□□□□ -1.31
HPS4-206ENST00000439453 SRRM4A7MD48 611 aaKnown RBP6.87□□□□□ -1.31
HPS4-206ENST00000439453 MOSP00540 346 aa6.87□□□□□ -1.31
HPS4-206ENST00000439453 P01737 135 aa6.87□□□□□ -1.31
HPS4-206ENST00000439453 TCTAP57738 103 aa6.87□□□□□ -1.31
HPS4-206ENST00000439453 PLP1P60201 277 aa6.87□□□□□ -1.31
HPS4-206ENST00000439453 C17orf58Q2M2W7 97 aa6.87□□□□□ -1.31
HPS4-206ENST00000439453 CT83Q5H943 113 aa6.87□□□□□ -1.31
HPS4-206ENST00000439453 KLF12Q9Y4X4 402 aa6.87□□□□□ -1.31
HPS4-206ENST00000439453 C9orf118A6NHY6 69 aa6.87□□□□□ -1.31
HPS4-206ENST00000439453 CLEC2AQ6UVW9 174 aa6.87□□□□□ -1.31
HPS4-206ENST00000439453 RBPMS2Q6ZRY4 209 aaKnown RBP6.87□□□□□ -1.31
HPS4-206ENST00000439453 WFDC8Q8IUA0 241 aa6.87□□□□□ -1.31
HPS4-206ENST00000439453 JMJD8Q96S16 334 aa6.87□□□□□ -1.31
HPS4-206ENST00000439453 MLST8Q9BVC4 326 aa6.87□□□□□ -1.31
HPS4-206ENST00000439453 PLSCR4Q9NRQ2 329 aa6.87□□□□□ -1.31
HPS4-206ENST00000439453 HEATR1Q9H583 2144 aaKnown RBP6.87□□□□□ -1.31
HPS4-206ENST00000439453 SRRM5B3KS81 715 aa6.86□□□□□ -1.31
HPS4-206ENST00000439453 CGB3P0DN86 165 aa6.86□□□□□ -1.31
HPS4-206ENST00000439453 CGB7P0DN87 165 aa6.86□□□□□ -1.31
HPS4-206ENST00000439453 FCER1GP30273 86 aa6.86□□□□□ -1.31
HPS4-206ENST00000439453 TMEM177Q53S58 311 aa6.86□□□□□ -1.31
HPS4-206ENST00000439453 PDPNQ86YL7 162 aa6.86□□□□□ -1.31
HPS4-206ENST00000439453 C19orf71A6NCJ1 209 aa6.86□□□□□ -1.31
HPS4-206ENST00000439453 PGPA6NDG6 321 aa6.86□□□□□ -1.31
HPS4-206ENST00000439453 H3BRM9 83 aa6.86□□□□□ -1.31
HPS4-206ENST00000439453 FSTL3O95633 263 aa6.86□□□□□ -1.31
HPS4-206ENST00000439453 PLAUP00749 431 aa6.86□□□□□ -1.31
HPS4-206ENST00000439453 IGKV1-16P04430 117 aa6.86□□□□□ -1.31
HPS4-206ENST00000439453 GFRA4Q9GZZ7 299 aa6.86□□□□□ -1.31
HPS4-206ENST00000439453 ZNF492Q9P255 531 aa6.86□□□□□ -1.31
HPS4-206ENST00000439453 OTOGQ6ZRI0 2925 aa6.86□□□□□ -1.31
HPS4-206ENST00000439453 GCSAMQ8N6F7 178 aa6.86□□□□□ -1.31
HPS4-206ENST00000439453 BLNKQ8WV28 456 aa6.86□□□□□ -1.31
HPS4-206ENST00000439453 ITLN1Q8WWA0 313 aa6.86□□□□□ -1.31
HPS4-206ENST00000439453 RAB37Q96AX2 223 aa6.86□□□□□ -1.31
HPS4-206ENST00000439453 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.85□□□□□ -1.31
HPS4-206ENST00000439453 H3BUT2 72 aa6.85□□□□□ -1.31
HPS4-206ENST00000439453 K7EP34 96 aa6.85□□□□□ -1.31
HPS4-206ENST00000439453 ZNF207O43670 478 aaKnown RBP6.85□□□□□ -1.31
HPS4-206ENST00000439453 SCGB2A2Q13296 93 aa6.85□□□□□ -1.31
HPS4-206ENST00000439453 C5orf17Q8NAS9 161 aa6.85□□□□□ -1.31
HPS4-206ENST00000439453 OR2Z1Q8NG97 314 aa6.85□□□□□ -1.31
HPS4-206ENST00000439453 NEU4Q8WWR8 484 aaPredicted RBP6.85□□□□□ -1.31
HPS4-206ENST00000439453 A6NDN8 102 aa6.85□□□□□ -1.31
HPS4-206ENST00000439453 SAA1P0DJI8 122 aaPredicted RBP6.85□□□□□ -1.31
HPS4-206ENST00000439453 TEX45Q8NA69 505 aa6.85□□□□□ -1.31
HPS4-206ENST00000439453 NPIPB3Q92617 1050 aa6.85□□□□□ -1.31
HPS4-206ENST00000439453 ZNF747Q9BV97 191 aa6.85□□□□□ -1.31
HPS4-206ENST00000439453 KBTBD11-OT1A0A1B0GTJ5 212 aa6.85□□□□□ -1.31
HPS4-206ENST00000439453 TCRBV4S1A1TA0A5B7 111 aa6.85□□□□□ -1.31
HPS4-206ENST00000439453 NCR2O95944 276 aa6.85□□□□□ -1.31
HPS4-206ENST00000439453 CT45A6P0DMU7 189 aa6.85□□□□□ -1.31
HPS4-206ENST00000439453 CT45A5P0DMU8 189 aa6.85□□□□□ -1.31
HPS4-206ENST00000439453 CT45A7P0DMV0 189 aa6.85□□□□□ -1.31
HPS4-206ENST00000439453 FGF6P10767 208 aa6.85□□□□□ -1.31
HPS4-206ENST00000439453 ERHP84090 104 aaKnown RBP6.85□□□□□ -1.31
HPS4-206ENST00000439453 MZT1Q08AG7 82 aa6.85□□□□□ -1.31
HPS4-206ENST00000439453 LINC00305Q7Z4B0 112 aa6.85□□□□□ -1.31
HPS4-206ENST00000439453 RNASE6Q93091 150 aaKnown RBP6.85□□□□□ -1.31
HPS4-206ENST00000439453 NAA38Q9BRA0 125 aaKnown RBP6.85□□□□□ -1.31
HPS4-206ENST00000439453 RAB9BQ9NP90 201 aa6.85□□□□□ -1.31
HPS4-206ENST00000439453 DSCAML1Q8TD84 2053 aa6.85□□□□□ -1.31
HPS4-206ENST00000439453 PKDREJQ9NTG1 2253 aa6.85□□□□□ -1.31
HPS4-206ENST00000439453 LTAP01374 205 aa6.84□□□□□ -1.31
HPS4-206ENST00000439453 IGKV3-15P01624 115 aa6.84□□□□□ -1.31
HPS4-206ENST00000439453 LOXP28300 417 aaPredicted RBP6.84□□□□□ -1.31
HPS4-206ENST00000439453 ARL3P36405 182 aa6.84□□□□□ -1.31
HPS4-206ENST00000439453 NEGR1Q7Z3B1 354 aa6.84□□□□□ -1.31
HPS4-206ENST00000439453 FMC1Q96HJ9 113 aa6.84□□□□□ -1.31
HPS4-206ENST00000439453 RABAC1Q9UI14 185 aa6.84□□□□□ -1.31
HPS4-206ENST00000439453 NOTCH2Q04721 2471 aa6.84□□□□□ -1.31
HPS4-206ENST00000439453 FLNBO75369 2602 aaKnown RBP6.84□□□□□ -1.31
HPS4-206ENST00000439453 IGKV1D-37A0A075B6S9 117 aa6.84□□□□□ -1.31
HPS4-206ENST00000439453 HAX1O00165 279 aa6.84□□□□□ -1.31
HPS4-206ENST00000439453 IGHV3-48P01763 117 aa6.84□□□□□ -1.31
HPS4-206ENST00000439453 APOHP02749 345 aaPredicted RBP6.84□□□□□ -1.31
HPS4-206ENST00000439453 LHFPL4Q7Z7J7 247 aa6.84□□□□□ -1.31
HPS4-206ENST00000439453 CNEP1R1Q8N9A8 125 aa6.84□□□□□ -1.31
HPS4-206ENST00000439453 OR10AG1Q8NH19 301 aa6.84□□□□□ -1.31
HPS4-206ENST00000439453 NDUFA4L2Q9NRX3 87 aa6.84□□□□□ -1.31
HPS4-206ENST00000439453 ABCA1O95477 2261 aa6.84□□□□□ -1.31
HPS4-206ENST00000439453 FAM27E3Q08E93 113 aa6.84□□□□□ -1.31
HPS4-206ENST00000439453 KIR3DS1Q14943 382 aa6.84□□□□□ -1.31
HPS4-206ENST00000439453 OR2K2Q8NGT1 345 aa6.84□□□□□ -1.31
HPS4-206ENST00000439453 AP5S1Q9NUS5 200 aa6.84□□□□□ -1.31
HPS4-206ENST00000439453 HILPDAQ9Y5L2 63 aa6.84□□□□□ -1.31
HPS4-206ENST00000439453 TEX15Q9BXT5 2789 aa6.84□□□□□ -1.31
HPS4-206ENST00000439453 DYSFO75923 2080 aa6.84□□□□□ -1.32
HPS4-206ENST00000439453 A0A0G2JLM5 398 aa6.83□□□□□ -1.32
HPS4-206ENST00000439453 THBDP07204 575 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms