RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 DCHS2Q6V1P9 2916 aa12.21□□□□□ -0.45
APP-208ENST00000439274 TCF21O43680 179 aa12.2□□□□□ -0.46
APP-208ENST00000439274 LINC00614P0C842 121 aa12.2□□□□□ -0.46
APP-208ENST00000439274 UNQ5815/PRO19632Q6UWF5 114 aa12.2□□□□□ -0.46
APP-208ENST00000439274 Q8NA96 180 aa12.2□□□□□ -0.46
APP-208ENST00000439274 VSTM5A8MXK1 200 aa12.2□□□□□ -0.46
APP-208ENST00000439274 OTORQ9NRC9 128 aa12.2□□□□□ -0.46
APP-208ENST00000439274 RALYQ9UKM9 306 aaKnown RBP12.2□□□□□ -0.46
APP-208ENST00000439274 RELNP78509 3460 aa12.2□□□□□ -0.46
APP-208ENST00000439274 ZNF785A8K8V0 405 aa12.19□□□□□ -0.46
APP-208ENST00000439274 I3L2K1 104 aa12.19□□□□□ -0.46
APP-208ENST00000439274 CHEK1O14757 476 aa12.19□□□□□ -0.46
APP-208ENST00000439274 PLGLAQ15195 96 aa12.19□□□□□ -0.46
APP-208ENST00000439274 MCRIP2Q9BUT9 160 aaKnown RBP12.19□□□□□ -0.46
APP-208ENST00000439274 MRPS16Q9Y3D3 137 aaKnown RBP12.19□□□□□ -0.46
APP-208ENST00000439274 OR4C46A6NHA9 309 aa12.19□□□□□ -0.46
APP-208ENST00000439274 OR4F17Q8NGA8 305 aa12.19□□□□□ -0.46
APP-208ENST00000439274 RASL11BQ9BPW5 248 aa12.19□□□□□ -0.46
APP-208ENST00000439274 LOC102724200A0A096LPH7 203 aaPredicted RBP12.18□□□□□ -0.46
APP-208ENST00000439274 hDV102S1A0JD36 115 aa12.18□□□□□ -0.46
APP-208ENST00000439274 NPIPB6E9PJ23 425 aa12.18□□□□□ -0.46
APP-208ENST00000439274 IGKV1-17P01599 117 aa12.18□□□□□ -0.46
APP-208ENST00000439274 S4R3C0 116 aa12.18□□□□□ -0.46
APP-208ENST00000439274 RPEQ96AT9 228 aa12.18□□□□□ -0.46
APP-208ENST00000439274 ZC2HC1AQ96GY0 325 aa12.18□□□□□ -0.46
APP-208ENST00000439274 GFRA4Q9GZZ7 299 aa12.18□□□□□ -0.46
APP-208ENST00000439274 TIMM8BQ9Y5J9 83 aaPredicted RBP12.18□□□□□ -0.46
APP-208ENST00000439274 SOX21Q9Y651 276 aaPredicted RBP12.18□□□□□ -0.46
APP-208ENST00000439274 SYS1-DBNDD2H3BUS1 97 aa12.17□□□□□ -0.46
APP-208ENST00000439274 OVOL3O00110 214 aa12.17□□□□□ -0.46
APP-208ENST00000439274 LEPROTL1O95214 131 aa12.17□□□□□ -0.46
APP-208ENST00000439274 APOHP02749 345 aaPredicted RBP12.17□□□□□ -0.46
APP-208ENST00000439274 CSN3P07498 182 aa12.17□□□□□ -0.46
APP-208ENST00000439274 LDLRAD2Q5SZI1 272 aa12.17□□□□□ -0.46
APP-208ENST00000439274 TNFRSF14Q92956 283 aa12.17□□□□□ -0.46
APP-208ENST00000439274 H0Y8G0 127 aa12.17□□□□□ -0.46
APP-208ENST00000439274 CHCHD1Q96BP2 118 aaKnown RBP12.17□□□□□ -0.46
APP-208ENST00000439274 TMEM14CQ9P0S9 112 aa12.17□□□□□ -0.46
APP-208ENST00000439274 CNIH1O95406 144 aa12.16□□□□□ -0.46
APP-208ENST00000439274 RBPJQ06330 500 aa12.16□□□□□ -0.46
APP-208ENST00000439274 PPIAL4CA0A0B4J2A2 164 aa12.16□□□□□ -0.46
APP-208ENST00000439274 ARMS2P0C7Q2 107 aa12.16□□□□□ -0.46
APP-208ENST00000439274 PPIAL4GP0DN37 164 aa12.16□□□□□ -0.46
APP-208ENST00000439274 PAX2Q02962 417 aa12.16□□□□□ -0.46
APP-208ENST00000439274 KLF17Q5JT82 389 aaPredicted RBP12.16□□□□□ -0.46
APP-208ENST00000439274 NGBQ9NPG2 151 aa12.16□□□□□ -0.46
APP-208ENST00000439274 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.15□□□□□ -0.46
APP-208ENST00000439274 C20orf202A1L168 122 aa12.15□□□□□ -0.46
APP-208ENST00000439274 K7EIM0 57 aa12.15□□□□□ -0.46
APP-208ENST00000439274 HOXB4P17483 251 aaPredicted RBP12.15□□□□□ -0.46
APP-208ENST00000439274 APOBEC3AP31941 199 aaPredicted RBP12.15□□□□□ -0.46
APP-208ENST00000439274 BCL6BQ8N143 479 aaPredicted RBP12.15□□□□□ -0.46
APP-208ENST00000439274 MSRB2Q9Y3D2 182 aa12.15□□□□□ -0.46
APP-208ENST00000439274 TRBV19A0A075B6N1 114 aa12.15□□□□□ -0.46
APP-208ENST00000439274 HAX1O00165 279 aa12.15□□□□□ -0.46
APP-208ENST00000439274 CCL25O15444 150 aa12.15□□□□□ -0.46
APP-208ENST00000439274 CRXO43186 299 aaPredicted RBP12.15□□□□□ -0.46
APP-208ENST00000439274 FAM162BQ5T6X4 162 aa12.15□□□□□ -0.46
APP-208ENST00000439274 MUC15Q8N387 334 aa12.15□□□□□ -0.46
APP-208ENST00000439274 RBM14Q96PK6 669 aaKnown RBP12.15□□□□□ -0.46
APP-208ENST00000439274 NDFIP1Q9BT67 221 aa12.15□□□□□ -0.46
APP-208ENST00000439274 TMUB1Q9BVT8 246 aa12.15□□□□□ -0.46
APP-208ENST00000439274 ARHGAP32A7KAX9 2087 aa12.15□□□□□ -0.46
APP-208ENST00000439274 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.14□□□□□ -0.47
APP-208ENST00000439274 TIMM23O14925 209 aa12.14□□□□□ -0.47
APP-208ENST00000439274 HTR1DP28221 377 aa12.14□□□□□ -0.47
APP-208ENST00000439274 C16orf54Q6UWD8 224 aa12.14□□□□□ -0.47
APP-208ENST00000439274 PMCHL2Q9BQD1 86 aa12.14□□□□□ -0.47
APP-208ENST00000439274 TPPP3Q9BW30 176 aa12.14□□□□□ -0.47
APP-208ENST00000439274 ONECUT1Q9UBC0 465 aa12.14□□□□□ -0.47
APP-208ENST00000439274 FAM231BA6NCW3 169 aa12.14□□□□□ -0.47
APP-208ENST00000439274 M0R3E3 92 aa12.14□□□□□ -0.47
APP-208ENST00000439274 LINC01560Q8TB33 94 aa12.14□□□□□ -0.47
APP-208ENST00000439274 SHANK2-AS3Q9BTD1 123 aa12.14□□□□□ -0.47
APP-208ENST00000439274 B9A039 149 aa12.13□□□□□ -0.47
APP-208ENST00000439274 CRIP1P50238 77 aa12.13□□□□□ -0.47
APP-208ENST00000439274 FBLN7Q53RD9 439 aa12.13□□□□□ -0.47
APP-208ENST00000439274 SIGLEC15Q6ZMC9 328 aa12.13□□□□□ -0.47
APP-208ENST00000439274 ORAOV1Q8WV07 137 aa12.13□□□□□ -0.47
APP-208ENST00000439274 HILPDAQ9Y5L2 63 aa12.13□□□□□ -0.47
APP-208ENST00000439274 COX11Q9Y6N1 276 aa12.13□□□□□ -0.47
APP-208ENST00000439274 TLN1Q9Y490 2541 aaKnown RBP12.13□□□□□ -0.47
APP-208ENST00000439274 A0A1B0GUT8 65 aa12.13□□□□□ -0.47
APP-208ENST00000439274 H3BRN7 92 aa12.13□□□□□ -0.47
APP-208ENST00000439274 LY6HO94772 140 aa12.13□□□□□ -0.47
APP-208ENST00000439274 HLA-DRB1P01911 266 aa12.13□□□□□ -0.47
APP-208ENST00000439274 IL4P05112 153 aa12.13□□□□□ -0.47
APP-208ENST00000439274 CD3EP07766 207 aa12.13□□□□□ -0.47
APP-208ENST00000439274 ERASQ7Z444 233 aa12.13□□□□□ -0.47
APP-208ENST00000439274 BPIFA4PQ86YQ2 179 aa12.13□□□□□ -0.47
APP-208ENST00000439274 PSG8Q9UQ74 426 aa12.13□□□□□ -0.47
APP-208ENST00000439274 LY6LH3BQJ8 138 aa12.12□□□□□ -0.47
APP-208ENST00000439274 K7ENP7 123 aa12.12□□□□□ -0.47
APP-208ENST00000439274 PTTG1IPP53801 180 aa12.12□□□□□ -0.47
APP-208ENST00000439274 ZNF491Q8N8L2 437 aa12.12□□□□□ -0.47
APP-208ENST00000439274 ABCA4P78363 2273 aa12.12□□□□□ -0.47
APP-208ENST00000439274 CEP295Q9C0D2 2601 aa12.12□□□□□ -0.47
APP-208ENST00000439274 SVEP1Q4LDE5 3571 aa12.12□□□□□ -0.47
APP-208ENST00000439274 A0A1W2PRD5 423 aa12.12□□□□□ -0.47
APP-208ENST00000439274 A0A1W2PRF3 423 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms