RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 MLST8Q9BVC4 326 aa5.9□□□□□ -1.46
COL17A1-204ENST00000433822 GFRA4Q9GZZ7 299 aa5.9□□□□□ -1.46
COL17A1-204ENST00000433822 MRPL27Q9P0M9 148 aaKnown RBP5.9□□□□□ -1.46
COL17A1-204ENST00000433822 EPDR1Q9UM22 224 aa5.9□□□□□ -1.46
COL17A1-204ENST00000433822 DCHS2Q6V1P9 2916 aa5.9□□□□□ -1.47
COL17A1-204ENST00000433822 NBEAL1Q6ZS30 2694 aa5.89□□□□□ -1.47
COL17A1-204ENST00000433822 KIR2DL5BA0A0G2JN68 375 aa5.89□□□□□ -1.47
COL17A1-204ENST00000433822 KIR2DL5BA0A0G2JPC4 375 aa5.89□□□□□ -1.47
COL17A1-204ENST00000433822 SERTM2A0A1B0GWG4 89 aa5.89□□□□□ -1.47
COL17A1-204ENST00000433822 FBLL1A6NHQ2 334 aaKnown RBP5.89□□□□□ -1.47
COL17A1-204ENST00000433822 NPIPB5A8MRT5 1133 aa5.89□□□□□ -1.47
COL17A1-204ENST00000433822 SNURFLB1AK76 121 aa5.89□□□□□ -1.47
COL17A1-204ENST00000433822 FCN1O00602 326 aa5.89□□□□□ -1.47
COL17A1-204ENST00000433822 NBR2O15453 112 aa5.89□□□□□ -1.47
COL17A1-204ENST00000433822 ENSAO43768 121 aaKnown RBP5.89□□□□□ -1.47
COL17A1-204ENST00000433822 OR2J3O76001 311 aa5.89□□□□□ -1.47
COL17A1-204ENST00000433822 PLAUP00749 431 aa5.89□□□□□ -1.47
COL17A1-204ENST00000433822 FSHBP01225 129 aa5.89□□□□□ -1.47
COL17A1-204ENST00000433822 NBEAP1P0C6P0 100 aa5.89□□□□□ -1.47
COL17A1-204ENST00000433822 DDTP30046 118 aa5.89□□□□□ -1.47
COL17A1-204ENST00000433822 S100A7P31151 101 aa5.89□□□□□ -1.47
COL17A1-204ENST00000433822 FCGR2BP31994 310 aaPredicted RBP5.89□□□□□ -1.47
COL17A1-204ENST00000433822 MFAP2P55001 183 aa5.89□□□□□ -1.47
COL17A1-204ENST00000433822 DEFA6Q01524 100 aa5.89□□□□□ -1.47
COL17A1-204ENST00000433822 PDE6HQ13956 83 aa5.89□□□□□ -1.47
COL17A1-204ENST00000433822 FAM162BQ5T6X4 162 aa5.89□□□□□ -1.47
COL17A1-204ENST00000433822 MORN5Q5VZ52 161 aa5.89□□□□□ -1.47
COL17A1-204ENST00000433822 TMEM136Q6ZRR5 245 aa5.89□□□□□ -1.47
COL17A1-204ENST00000433822 BAGE2Q86Y30 109 aa5.89□□□□□ -1.47
COL17A1-204ENST00000433822 OR8I2Q8N0Y5 310 aa5.89□□□□□ -1.47
COL17A1-204ENST00000433822 KIR2DL5AQ8N109 375 aa5.89□□□□□ -1.47
COL17A1-204ENST00000433822 OR4B1Q8NGF8 309 aa5.89□□□□□ -1.47
COL17A1-204ENST00000433822 CMTM2Q8TAZ6 248 aa5.89□□□□□ -1.47
COL17A1-204ENST00000433822 LINC01560Q8TB33 94 aa5.89□□□□□ -1.47
COL17A1-204ENST00000433822 TSKUQ8WUA8 353 aa5.89□□□□□ -1.47
COL17A1-204ENST00000433822 PRSS22Q9GZN4 317 aa5.89□□□□□ -1.47
COL17A1-204ENST00000433822 OTORQ9NRC9 128 aa5.89□□□□□ -1.47
COL17A1-204ENST00000433822 AP5S1Q9NUS5 200 aa5.89□□□□□ -1.47
COL17A1-204ENST00000433822 AURKAIP1Q9NWT8 199 aaPredicted RBP5.89□□□□□ -1.47
COL17A1-204ENST00000433822 MRPL36Q9P0J6 103 aaKnown RBP5.89□□□□□ -1.47
COL17A1-204ENST00000433822 HIGD1AQ9Y241 93 aa5.89□□□□□ -1.47
COL17A1-204ENST00000433822 PKDREJQ9NTG1 2253 aa5.88□□□□□ -1.47
COL17A1-204ENST00000433822 LOC105371242A0A075B767 164 aa5.88□□□□□ -1.47
COL17A1-204ENST00000433822 FAM90A27PA6NNH2 459 aa5.88□□□□□ -1.47
COL17A1-204ENST00000433822 ZNF705GA8MUZ8 300 aaPredicted RBP5.88□□□□□ -1.47
COL17A1-204ENST00000433822 A8MWP6 167 aa5.88□□□□□ -1.47
COL17A1-204ENST00000433822 SLC17A3O00476 420 aa5.88□□□□□ -1.47
COL17A1-204ENST00000433822 SCGB2A1O75556 95 aa5.88□□□□□ -1.47
COL17A1-204ENST00000433822 MOSP00540 346 aa5.88□□□□□ -1.47
COL17A1-204ENST00000433822 LTAP01374 205 aa5.88□□□□□ -1.47
COL17A1-204ENST00000433822 CBLN1P23435 193 aa5.88□□□□□ -1.47
COL17A1-204ENST00000433822 BRS3P32247 399 aa5.88□□□□□ -1.47
COL17A1-204ENST00000433822 UBE2G1P62253 170 aa5.88□□□□□ -1.47
COL17A1-204ENST00000433822 OR5I1Q13606 314 aa5.88□□□□□ -1.47
COL17A1-204ENST00000433822 USF2Q15853 346 aaPredicted RBP5.88□□□□□ -1.47
COL17A1-204ENST00000433822 CLEC12BQ2HXU8 276 aa5.88□□□□□ -1.47
COL17A1-204ENST00000433822 TOMM20LQ6UXN7 152 aa5.88□□□□□ -1.47
COL17A1-204ENST00000433822 Q8N6K4 173 aa5.88□□□□□ -1.47
COL17A1-204ENST00000433822 RITA1Q96K30 269 aa5.88□□□□□ -1.47
COL17A1-204ENST00000433822 RASL11BQ9BPW5 248 aa5.88□□□□□ -1.47
COL17A1-204ENST00000433822 NDUFAF3Q9BU61 184 aa5.88□□□□□ -1.47
COL17A1-204ENST00000433822 SSBP3Q9BWW4 388 aaPredicted RBP5.88□□□□□ -1.47
COL17A1-204ENST00000433822 NAT8BQ9UHF3 227 aa5.88□□□□□ -1.47
COL17A1-204ENST00000433822 TP53TG3Q9ULZ0 132 aa5.88□□□□□ -1.47
COL17A1-204ENST00000433822 TBL2Q9Y4P3 447 aaKnown RBP5.88□□□□□ -1.47
COL17A1-204ENST00000433822 ACANP16112 2415 aa5.88□□□□□ -1.47
COL17A1-204ENST00000433822 TRAV5A0A0B4J249 113 aa5.87□□□□□ -1.47
COL17A1-204ENST00000433822 TRAV20A0A0B4J274 112 aa5.87□□□□□ -1.47
COL17A1-204ENST00000433822 A0A1B0GXF2 115 aa5.87□□□□□ -1.47
COL17A1-204ENST00000433822 C19orf71A6NCJ1 209 aa5.87□□□□□ -1.47
COL17A1-204ENST00000433822 A6NNC1 897 aa5.87□□□□□ -1.47
COL17A1-204ENST00000433822 A8MWL6 223 aa5.87□□□□□ -1.47
COL17A1-204ENST00000433822 H3BRN7 92 aa5.87□□□□□ -1.47
COL17A1-204ENST00000433822 K7EIM0 57 aa5.87□□□□□ -1.47
COL17A1-204ENST00000433822 TIMM23O14925 209 aa5.87□□□□□ -1.47
COL17A1-204ENST00000433822 IGKV1-17P01599 117 aa5.87□□□□□ -1.47
COL17A1-204ENST00000433822 TCRAP04437 139 aa5.87□□□□□ -1.47
COL17A1-204ENST00000433822 PYYP10082 97 aa5.87□□□□□ -1.47
COL17A1-204ENST00000433822 RAB4AP20338 218 aa5.87□□□□□ -1.47
COL17A1-204ENST00000433822 IER3P46695 156 aa5.87□□□□□ -1.47
COL17A1-204ENST00000433822 KLF5Q13887 457 aaPredicted RBP5.87□□□□□ -1.47
COL17A1-204ENST00000433822 C5orf64Q2M2E5 130 aa5.87□□□□□ -1.47
COL17A1-204ENST00000433822 FAM209BQ5JX69 171 aa5.87□□□□□ -1.47
COL17A1-204ENST00000433822 C1orf194Q5T5A4 169 aa5.87□□□□□ -1.47
COL17A1-204ENST00000433822 C16orf54Q6UWD8 224 aa5.87□□□□□ -1.47
COL17A1-204ENST00000433822 ZNF562Q6V9R5 426 aa5.87□□□□□ -1.47
COL17A1-204ENST00000433822 TEX43Q6ZNM6 134 aa5.87□□□□□ -1.47
COL17A1-204ENST00000433822 BPIFA4PQ86YQ2 179 aa5.87□□□□□ -1.47
COL17A1-204ENST00000433822 OR1B1Q8NGR6 318 aa5.87□□□□□ -1.47
COL17A1-204ENST00000433822 MS4A10Q96PG2 267 aa5.87□□□□□ -1.47
COL17A1-204ENST00000433822 ATP6V0BQ99437 205 aa5.87□□□□□ -1.47
COL17A1-204ENST00000433822 TXN2Q99757 166 aa5.87□□□□□ -1.47
COL17A1-204ENST00000433822 C20orf144Q9BQM9 153 aa5.87□□□□□ -1.47
COL17A1-204ENST00000433822 SHANK2-AS3Q9BTD1 123 aa5.87□□□□□ -1.47
COL17A1-204ENST00000433822 SLC25A39Q9BZJ4 359 aaPredicted RBP5.87□□□□□ -1.47
COL17A1-204ENST00000433822 FBXL15Q9H469 300 aa5.87□□□□□ -1.47
COL17A1-204ENST00000433822 ZNF331Q9NQX6 463 aaPredicted RBP5.87□□□□□ -1.47
COL17A1-204ENST00000433822 ROS1P08922 2347 aa5.87□□□□□ -1.47
COL17A1-204ENST00000433822 IGLV11-55A0A075B6I3 123 aa5.86□□□□□ -1.47
COL17A1-204ENST00000433822 IGHV3-72A0A0B4J1Y9 119 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms