RNA–Protein interactions for RNA: ENST00000431283.1

PTPN4-204, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-204ENST00000431283 RBMX2Q9Y388 322 aaKnown RBP2.41□□□□□ -2.02
PTPN4-204ENST00000431283 AK6Q9Y3D8 172 aaKnown RBP2.41□□□□□ -2.02
PTPN4-204ENST00000431283 S4R3C0 116 aa2.41□□□□□ -2.02
PTPN4-204ENST00000431283 V9GY05 133 aa2.41□□□□□ -2.02
PTPN4-204ENST00000431283 IGLV11-55A0A075B6I3 123 aa2.4□□□□□ -2.03
PTPN4-204ENST00000431283 TRAV14DV4A0A0A6YYC5 116 aa2.4□□□□□ -2.03
PTPN4-204ENST00000431283 TRAV10A0A0B4J240 114 aa2.4□□□□□ -2.03
PTPN4-204ENST00000431283 C5orf51A6NDU8 294 aa2.4□□□□□ -2.03
PTPN4-204ENST00000431283 K7EMT4 169 aa2.4□□□□□ -2.03
PTPN4-204ENST00000431283 DEFB4AO15263 64 aa2.4□□□□□ -2.03
PTPN4-204ENST00000431283 NUPL2O15504 423 aaKnown RBP2.4□□□□□ -2.03
PTPN4-204ENST00000431283 TGOLN2O43493 480 aa2.4□□□□□ -2.03
PTPN4-204ENST00000431283 CA1P00915 261 aaPredicted RBP2.4□□□□□ -2.03
PTPN4-204ENST00000431283 IFNA21P01568 189 aa2.4□□□□□ -2.03
PTPN4-204ENST00000431283 IFNA17P01571 189 aa2.4□□□□□ -2.03
PTPN4-204ENST00000431283 HLA-DQB1P01920 261 aa2.4□□□□□ -2.03
PTPN4-204ENST00000431283 CTSDP07339 412 aaPredicted RBP2.4□□□□□ -2.03
PTPN4-204ENST00000431283 TRAPPC2P0DI81 140 aa2.4□□□□□ -2.03
PTPN4-204ENST00000431283 TRAPPC2BP0DI82 140 aa2.4□□□□□ -2.03
PTPN4-204ENST00000431283 P0DMU3 169 aa2.4□□□□□ -2.03
PTPN4-204ENST00000431283 FAM231AP0DMU4 169 aa2.4□□□□□ -2.03
PTPN4-204ENST00000431283 FAM231CP0DMU5 169 aa2.4□□□□□ -2.03
PTPN4-204ENST00000431283 MIFP14174 115 aa2.4□□□□□ -2.03
PTPN4-204ENST00000431283 NQO2P16083 231 aa2.4□□□□□ -2.03
PTPN4-204ENST00000431283 HIST1H1DP16402 221 aaKnown RBP2.4□□□□□ -2.03
PTPN4-204ENST00000431283 NFYAP23511 347 aaPredicted RBP2.4□□□□□ -2.03
PTPN4-204ENST00000431283 NPY1RP25929 384 aa2.4□□□□□ -2.03
PTPN4-204ENST00000431283 TFPI2P48307 235 aa2.4□□□□□ -2.03
PTPN4-204ENST00000431283 CLDN12P56749 244 aa2.4□□□□□ -2.03
PTPN4-204ENST00000431283 TAS2R31P59538 309 aa2.4□□□□□ -2.03
PTPN4-204ENST00000431283 OR2B8PP59922 312 aa2.4□□□□□ -2.03
PTPN4-204ENST00000431283 CATR1Q13166 79 aa2.4□□□□□ -2.03
PTPN4-204ENST00000431283 MOBPQ13875 183 aa2.4□□□□□ -2.03
PTPN4-204ENST00000431283 KLK9Q2XQG4 91 aa2.4□□□□□ -2.03
PTPN4-204ENST00000431283 Q56UQ5 140 aa2.4□□□□□ -2.03
PTPN4-204ENST00000431283 HES5Q5TA89 166 aa2.4□□□□□ -2.03
PTPN4-204ENST00000431283 PVRIGQ6DKI7 326 aa2.4□□□□□ -2.03
PTPN4-204ENST00000431283 CNIH2Q6PI25 160 aa2.4□□□□□ -2.03
PTPN4-204ENST00000431283 Q6ZS49 121 aa2.4□□□□□ -2.03
PTPN4-204ENST00000431283 C19orf35Q6ZS72 473 aa2.4□□□□□ -2.03
PTPN4-204ENST00000431283 PUSL1Q8N0Z8 303 aaKnown RBP2.4□□□□□ -2.03
PTPN4-204ENST00000431283 PACRGLQ8N7B6 248 aa2.4□□□□□ -2.03
PTPN4-204ENST00000431283 GDPD1Q8N9F7 314 aa2.4□□□□□ -2.03
PTPN4-204ENST00000431283 UBAC2Q8NBM4 344 aa2.4□□□□□ -2.03
PTPN4-204ENST00000431283 DUSP18Q8NEJ0 188 aa2.4□□□□□ -2.03
PTPN4-204ENST00000431283 MAFIPQ8WZ33 124 aa2.4□□□□□ -2.03
PTPN4-204ENST00000431283 BORCS5Q969J3 196 aa2.4□□□□□ -2.03
PTPN4-204ENST00000431283 RNF2Q99496 336 aa2.4□□□□□ -2.03
PTPN4-204ENST00000431283 ATG5Q9H1Y0 275 aa2.4□□□□□ -2.03
PTPN4-204ENST00000431283 DCSTAMPQ9H295 470 aa2.4□□□□□ -2.03
PTPN4-204ENST00000431283 BET1LQ9NYM9 111 aa2.4□□□□□ -2.03
PTPN4-204ENST00000431283 C21orf62Q9NYP8 219 aa2.4□□□□□ -2.03
PTPN4-204ENST00000431283 TAS2R8Q9NYW2 309 aa2.4□□□□□ -2.03
PTPN4-204ENST00000431283 SMPXQ9UHP9 88 aa2.4□□□□□ -2.03
PTPN4-204ENST00000431283 KLK9Q9UKQ9 250 aa2.4□□□□□ -2.03
PTPN4-204ENST00000431283 APLNQ9ULZ1 77 aa2.4□□□□□ -2.03
PTPN4-204ENST00000431283 VPS13DQ5THJ4 4388 aa2.4□□□□□ -2.03
PTPN4-204ENST00000431283 IGKV3-7A0A075B6H7 116 aa2.39□□□□□ -2.03
PTPN4-204ENST00000431283 IGHV3OR16-8A0A075B7F1 116 aa2.39□□□□□ -2.03
PTPN4-204ENST00000431283 IGHV7-4-1A0A0J9YVY3 117 aa2.39□□□□□ -2.03
PTPN4-204ENST00000431283 A0A1B0GW64 132 aa2.39□□□□□ -2.03
PTPN4-204ENST00000431283 IGLC7A0M8Q6 106 aa2.39□□□□□ -2.03
PTPN4-204ENST00000431283 IFITM5A6NNB3 132 aa2.39□□□□□ -2.03
PTPN4-204ENST00000431283 E7EUB6 86 aa2.39□□□□□ -2.03
PTPN4-204ENST00000431283 UPK2O00526 184 aa2.39□□□□□ -2.03
PTPN4-204ENST00000431283 MFNGO00587 321 aa2.39□□□□□ -2.03
PTPN4-204ENST00000431283 CASQ2O14958 399 aaPredicted RBP2.39□□□□□ -2.03
PTPN4-204ENST00000431283 RBFOX2O43251 390 aaKnown RBP eCLIP2.39□□□□□ -2.03
PTPN4-204ENST00000431283 ZNF207O43670 478 aaKnown RBP2.39□□□□□ -2.03
PTPN4-204ENST00000431283 SCGB2A1O75556 95 aa2.39□□□□□ -2.03
PTPN4-204ENST00000431283 SNAPC5O75971 98 aa2.39□□□□□ -2.03
PTPN4-204ENST00000431283 SCGNO76038 276 aa2.39□□□□□ -2.03
PTPN4-204ENST00000431283 HPRT1P00492 218 aa2.39□□□□□ -2.03
PTPN4-204ENST00000431283 IFNA10P01566 189 aa2.39□□□□□ -2.03
PTPN4-204ENST00000431283 SERPINE2P07093 398 aa2.39□□□□□ -2.03
PTPN4-204ENST00000431283 OR13C7P0DN81 318 aa2.39□□□□□ -2.03
PTPN4-204ENST00000431283 MYL9P24844 172 aa2.39□□□□□ -2.03
PTPN4-204ENST00000431283 HLA-DMBP28068 263 aa2.39□□□□□ -2.03
PTPN4-204ENST00000431283 CNN1P51911 297 aaKnown RBP2.39□□□□□ -2.03
PTPN4-204ENST00000431283 GNG2P59768 71 aa2.39□□□□□ -2.03
PTPN4-204ENST00000431283 NUTF2P61970 127 aaKnown RBP2.39□□□□□ -2.03
PTPN4-204ENST00000431283 RPS25P62851 125 aaKnown RBP2.39□□□□□ -2.03
PTPN4-204ENST00000431283 RPL30P62888 115 aaKnown RBP2.39□□□□□ -2.03
PTPN4-204ENST00000431283 MSMO1Q15800 293 aa2.39□□□□□ -2.03
PTPN4-204ENST00000431283 CDNFQ49AH0 187 aa2.39□□□□□ -2.03
PTPN4-204ENST00000431283 HACD4Q5VWC8 232 aa2.39□□□□□ -2.03
PTPN4-204ENST00000431283 MORN3Q6PF18 240 aaPredicted RBP2.39□□□□□ -2.03
PTPN4-204ENST00000431283 TPRA1Q86W33 373 aa2.39□□□□□ -2.03
PTPN4-204ENST00000431283 UBE2DNLQ8IWF7 75 aa2.39□□□□□ -2.03
PTPN4-204ENST00000431283 OR1L8Q8NGR8 309 aa2.39□□□□□ -2.03
PTPN4-204ENST00000431283 LSM10Q969L4 123 aaKnown RBP2.39□□□□□ -2.03
PTPN4-204ENST00000431283 RNF185Q96GF1 192 aa2.39□□□□□ -2.03
PTPN4-204ENST00000431283 NARS2Q96I59 477 aaKnown RBP2.39□□□□□ -2.03
PTPN4-204ENST00000431283 TMEM56Q96MV1 263 aa2.39□□□□□ -2.03
PTPN4-204ENST00000431283 GINS3Q9BRX5 216 aa2.39□□□□□ -2.03
PTPN4-204ENST00000431283 RNF126Q9BV68 326 aa2.39□□□□□ -2.03
PTPN4-204ENST00000431283 RHPN1-AS1Q9BWJ2 59 aa2.39□□□□□ -2.03
PTPN4-204ENST00000431283 HINT2Q9BX68 163 aa2.39□□□□□ -2.03
PTPN4-204ENST00000431283 TMEM231Q9H6L2 316 aa2.39□□□□□ -2.03
PTPN4-204ENST00000431283 FKBP14Q9NWM8 211 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms