RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 A0A087WX48 190 aa7.91□□□□□ -1.14
SNX13-203ENST00000428135 IZUMO1RA6ND01 250 aa7.91□□□□□ -1.14
SNX13-203ENST00000428135 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.91□□□□□ -1.14
SNX13-203ENST00000428135 ATP5LO75964 103 aa7.91□□□□□ -1.14
SNX13-203ENST00000428135 XCL2Q9UBD3 114 aa7.91□□□□□ -1.14
SNX13-203ENST00000428135 KNCNA6PVL3 124 aa7.91□□□□□ -1.14
SNX13-203ENST00000428135 ID3Q02535 119 aa7.91□□□□□ -1.14
SNX13-203ENST00000428135 MRPL16Q9NX20 251 aaKnown RBP7.91□□□□□ -1.14
SNX13-203ENST00000428135 MYLKQ15746 1914 aa7.91□□□□□ -1.14
SNX13-203ENST00000428135 A0A0G2JRQ6 117 aa7.9□□□□□ -1.14
SNX13-203ENST00000428135 A0A1W2PNU3 283 aaPredicted RBP7.9□□□□□ -1.14
SNX13-203ENST00000428135 TCRAP04437 139 aa7.9□□□□□ -1.14
SNX13-203ENST00000428135 SUPT4H1P63272 117 aaKnown RBP7.9□□□□□ -1.14
SNX13-203ENST00000428135 NUDT10Q8NFP7 164 aa7.9□□□□□ -1.14
SNX13-203ENST00000428135 GTF3C1Q12789 2109 aa7.9□□□□□ -1.14
SNX13-203ENST00000428135 A0A087WWL8 130 aa7.9□□□□□ -1.14
SNX13-203ENST00000428135 HEATR5AQ86XA9 2040 aa7.9□□□□□ -1.14
SNX13-203ENST00000428135 A0A1B0GWJ7 208 aa7.9□□□□□ -1.14
SNX13-203ENST00000428135 IFI27P40305 119 aaPredicted RBP7.9□□□□□ -1.14
SNX13-203ENST00000428135 JOSD1Q15040 202 aaPredicted RBP7.9□□□□□ -1.14
SNX13-203ENST00000428135 COL5A1-AS1Q5SY13 56 aa7.9□□□□□ -1.14
SNX13-203ENST00000428135 Q6ZR03 302 aa7.9□□□□□ -1.14
SNX13-203ENST00000428135 PEF1Q9UBV8 284 aaKnown RBP7.9□□□□□ -1.14
SNX13-203ENST00000428135 H3BRM9 83 aa7.9□□□□□ -1.15
SNX13-203ENST00000428135 NTF4P34130 210 aa7.9□□□□□ -1.15
SNX13-203ENST00000428135 C21orf62-AS1Q17RA5 79 aa7.9□□□□□ -1.15
SNX13-203ENST00000428135 CLDN16Q9Y5I7 305 aa7.9□□□□□ -1.15
SNX13-203ENST00000428135 ZNF98A6NK75 572 aa7.9□□□□□ -1.15
SNX13-203ENST00000428135 TYMSP04818 313 aa7.9□□□□□ -1.15
SNX13-203ENST00000428135 CTAG1AP78358 180 aa7.9□□□□□ -1.15
SNX13-203ENST00000428135 TRBV9A0A0B4J1U6 114 aa7.89□□□□□ -1.15
SNX13-203ENST00000428135 IGHV3-16A0A0C4DH30 117 aa7.89□□□□□ -1.15
SNX13-203ENST00000428135 PGPEP1Q9NXJ5 209 aa7.89□□□□□ -1.15
SNX13-203ENST00000428135 UQCR10Q9UDW1 63 aa7.89□□□□□ -1.15
SNX13-203ENST00000428135 CENPFP49454 3210 aa7.89□□□□□ -1.15
SNX13-203ENST00000428135 IGF2RP11717 2491 aa7.89□□□□□ -1.15
SNX13-203ENST00000428135 FOXL1Q12952 345 aa7.89□□□□□ -1.15
SNX13-203ENST00000428135 DMRTC2Q8IXT2 367 aaPredicted RBP7.89□□□□□ -1.15
SNX13-203ENST00000428135 CBY1Q9Y3M2 126 aa7.89□□□□□ -1.15
SNX13-203ENST00000428135 LSM4Q9Y4Z0 139 aaKnown RBP7.89□□□□□ -1.15
SNX13-203ENST00000428135 FAM215AQ9Y5M1 114 aa7.89□□□□□ -1.15
SNX13-203ENST00000428135 TRGV11A0A075B6L2 103 aa7.89□□□□□ -1.15
SNX13-203ENST00000428135 FAM120AOSQ5T036 256 aa7.89□□□□□ -1.15
SNX13-203ENST00000428135 HOXA3O43365 443 aaPredicted RBP7.89□□□□□ -1.15
SNX13-203ENST00000428135 TRBV7-1A0A0A6YYK4 115 aa7.89□□□□□ -1.15
SNX13-203ENST00000428135 OVOL1O14753 267 aa7.89□□□□□ -1.15
SNX13-203ENST00000428135 STAG3L2P0CL84 134 aa7.89□□□□□ -1.15
SNX13-203ENST00000428135 PLP1P60201 277 aa7.89□□□□□ -1.15
SNX13-203ENST00000428135 DIAPH2-AS1Q14236 149 aa7.89□□□□□ -1.15
SNX13-203ENST00000428135 ZNF876PQ49A33 203 aa7.89□□□□□ -1.15
SNX13-203ENST00000428135 WDR83OSQ9Y284 106 aa7.89□□□□□ -1.15
SNX13-203ENST00000428135 COTL1Q14019 142 aa7.88□□□□□ -1.15
SNX13-203ENST00000428135 LCN12Q6JVE5 192 aa7.88□□□□□ -1.15
SNX13-203ENST00000428135 FBLN5Q9UBX5 448 aa7.88□□□□□ -1.15
SNX13-203ENST00000428135 IGHV1-69DA0A0B4J2H0 117 aa7.88□□□□□ -1.15
SNX13-203ENST00000428135 SERF1AO75920 110 aa7.88□□□□□ -1.15
SNX13-203ENST00000428135 IGHV1-69P01742 117 aa7.88□□□□□ -1.15
SNX13-203ENST00000428135 PRTN3P24158 256 aa7.88□□□□□ -1.15
SNX13-203ENST00000428135 CDX1P47902 265 aaPredicted RBP7.88□□□□□ -1.15
SNX13-203ENST00000428135 TRAV2A0A0B4J234 112 aa7.88□□□□□ -1.15
SNX13-203ENST00000428135 DKK1O94907 266 aa7.88□□□□□ -1.15
SNX13-203ENST00000428135 RNF114Q9Y508 228 aa7.88□□□□□ -1.15
SNX13-203ENST00000428135 SMKR1H3BMG3 65 aa7.88□□□□□ -1.15
SNX13-203ENST00000428135 PRADC1Q9BSG0 188 aa7.88□□□□□ -1.15
SNX13-203ENST00000428135 CD300EQ496F6 205 aaPredicted RBP7.87□□□□□ -1.15
SNX13-203ENST00000428135 C14orf178Q8N769 122 aaPredicted RBP7.87□□□□□ -1.15
SNX13-203ENST00000428135 KLK9Q9UKQ9 250 aa7.87□□□□□ -1.15
SNX13-203ENST00000428135 LINC00614P0C842 121 aa7.87□□□□□ -1.15
SNX13-203ENST00000428135 LINC00479Q96M42 142 aa7.87□□□□□ -1.15
SNX13-203ENST00000428135 DYSFO75923 2080 aa7.87□□□□□ -1.15
SNX13-203ENST00000428135 IGHV4-39P01824 125 aa7.87□□□□□ -1.15
SNX13-203ENST00000428135 SPINK13Q1W4C9 94 aa7.87□□□□□ -1.15
SNX13-203ENST00000428135 WDR86Q86TI4 376 aa7.87□□□□□ -1.15
SNX13-203ENST00000428135 TPSG1Q9NRR2 321 aa7.87□□□□□ -1.15
SNX13-203ENST00000428135 SHANK1Q9Y566 2161 aa7.87□□□□□ -1.15
SNX13-203ENST00000428135 A0A096LPF7 62 aa7.87□□□□□ -1.15
SNX13-203ENST00000428135 Q6ZRM9 215 aa7.87□□□□□ -1.15
SNX13-203ENST00000428135 A0A1W2PPI3 338 aa7.87□□□□□ -1.15
SNX13-203ENST00000428135 LYZL1Q6UWQ5 148 aa7.87□□□□□ -1.15
SNX13-203ENST00000428135 MMP23AO75900 390 aa7.86□□□□□ -1.15
SNX13-203ENST00000428135 NDUFB8O95169 186 aa7.86□□□□□ -1.15
SNX13-203ENST00000428135 LINC00158P58513 81 aa7.86□□□□□ -1.15
SNX13-203ENST00000428135 REG4Q9BYZ8 158 aa7.86□□□□□ -1.15
SNX13-203ENST00000428135 WDR87Q6ZQQ6 2873 aa7.86□□□□□ -1.15
SNX13-203ENST00000428135 TRAV12-2A0A075B6T6 113 aa7.86□□□□□ -1.15
SNX13-203ENST00000428135 SH2D1AO60880 128 aa7.86□□□□□ -1.15
SNX13-203ENST00000428135 TMEM155Q4W5P6 130 aa7.86□□□□□ -1.15
SNX13-203ENST00000428135 IGHV2-70DA0A0C4DH43 119 aa7.86□□□□□ -1.15
SNX13-203ENST00000428135 SMIM13P0DJ93 91 aa7.86□□□□□ -1.15
SNX13-203ENST00000428135 A0A1W2PRE2 83 aa7.86□□□□□ -1.15
SNX13-203ENST00000428135 FHL1Q13642 323 aa7.86□□□□□ -1.15
SNX13-203ENST00000428135 ASPHD1Q5U4P2 390 aa7.86□□□□□ -1.15
SNX13-203ENST00000428135 IGFL3Q6UXB1 125 aa7.86□□□□□ -1.15
SNX13-203ENST00000428135 C1orf159Q96HA4 380 aa7.86□□□□□ -1.15
SNX13-203ENST00000428135 MRPS16Q9Y3D3 137 aaKnown RBP7.86□□□□□ -1.15
SNX13-203ENST00000428135 F5H768 121 aa7.85□□□□□ -1.15
SNX13-203ENST00000428135 UBE2E1P51965 193 aa7.85□□□□□ -1.15
SNX13-203ENST00000428135 SRSF1Q07955 248 aaKnown RBP eCLIP7.85□□□□□ -1.15
SNX13-203ENST00000428135 SPSB3Q6PJ21 355 aa7.85□□□□□ -1.15
SNX13-203ENST00000428135 LHFPL1Q86WI0 220 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms