RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 C10orf99Q6UWK7 81 aa4.11□□□□□ -1.75
C9orf3-205ENST00000427193 CENPVQ7Z7K6 275 aaPredicted RBP4.11□□□□□ -1.75
C9orf3-205ENST00000427193 ZNF546Q86UE3 836 aa4.11□□□□□ -1.75
C9orf3-205ENST00000427193 OR1L6Q8NGR2 347 aa4.11□□□□□ -1.75
C9orf3-205ENST00000427193 GRPEL2Q8TAA5 225 aa4.11□□□□□ -1.75
C9orf3-205ENST00000427193 VN1R17PQ8TDU5 208 aa4.11□□□□□ -1.75
C9orf3-205ENST00000427193 PARP11Q9NR21 331 aa4.11□□□□□ -1.75
C9orf3-205ENST00000427193 PSENENQ9NZ42 101 aa4.11□□□□□ -1.75
C9orf3-205ENST00000427193 STRAPQ9Y3F4 350 aaKnown RBP4.11□□□□□ -1.75
C9orf3-205ENST00000427193 LSM5Q9Y4Y9 91 aaKnown RBP4.11□□□□□ -1.75
C9orf3-205ENST00000427193 HSPB11Q9Y547 144 aa4.11□□□□□ -1.75
C9orf3-205ENST00000427193 AGRNO00468 2067 aa4.1□□□□□ -1.75
C9orf3-205ENST00000427193 CSMD3Q7Z407 3707 aa4.1□□□□□ -1.75
C9orf3-205ENST00000427193 IGKV1D-37A0A075B6S9 117 aa4.1□□□□□ -1.75
C9orf3-205ENST00000427193 A0A087WW49 117 aa4.1□□□□□ -1.75
C9orf3-205ENST00000427193 A0A0D9SG52 128 aa4.1□□□□□ -1.75
C9orf3-205ENST00000427193 H3BP45 60 aa4.1□□□□□ -1.75
C9orf3-205ENST00000427193 L7N2F9 121 aa4.1□□□□□ -1.75
C9orf3-205ENST00000427193 ARPC5O15511 151 aa4.1□□□□□ -1.75
C9orf3-205ENST00000427193 PAGE4O60829 102 aa4.1□□□□□ -1.75
C9orf3-205ENST00000427193 PFDN1O60925 122 aa4.1□□□□□ -1.75
C9orf3-205ENST00000427193 CST7O76096 145 aa4.1□□□□□ -1.75
C9orf3-205ENST00000427193 IGKV1-17P01599 117 aa4.1□□□□□ -1.75
C9orf3-205ENST00000427193 OR8U8P0C7N1 319 aa4.1□□□□□ -1.75
C9orf3-205ENST00000427193 METTL15P1P0C7V9 234 aa4.1□□□□□ -1.75
C9orf3-205ENST00000427193 HIST1H1BP16401 226 aaKnown RBP4.1□□□□□ -1.75
C9orf3-205ENST00000427193 PVALBP20472 110 aaPredicted RBP4.1□□□□□ -1.75
C9orf3-205ENST00000427193 S100A11P31949 105 aa4.1□□□□□ -1.75
C9orf3-205ENST00000427193 RAB9AP51151 201 aa4.1□□□□□ -1.75
C9orf3-205ENST00000427193 S100A10P60903 97 aa4.1□□□□□ -1.75
C9orf3-205ENST00000427193 RPL23AP62750 156 aaKnown RBP4.1□□□□□ -1.75
C9orf3-205ENST00000427193 DLK1P80370 383 aa4.1□□□□□ -1.75
C9orf3-205ENST00000427193 RUNX1Q01196 453 aa4.1□□□□□ -1.75
C9orf3-205ENST00000427193 EXOSC2Q13868 293 aaKnown RBP4.1□□□□□ -1.75
C9orf3-205ENST00000427193 GAMTQ14353 236 aa4.1□□□□□ -1.75
C9orf3-205ENST00000427193 SPANXN5Q5MJ07 72 aa4.1□□□□□ -1.75
C9orf3-205ENST00000427193 UNQ5815/PRO19632Q6UWF5 114 aa4.1□□□□□ -1.75
C9orf3-205ENST00000427193 COMMD1Q8N668 190 aa4.1□□□□□ -1.75
C9orf3-205ENST00000427193 THAP8Q8NA92 274 aa4.1□□□□□ -1.75
C9orf3-205ENST00000427193 UBAC2Q8NBM4 344 aa4.1□□□□□ -1.75
C9orf3-205ENST00000427193 NECAP1Q8NC96 275 aa4.1□□□□□ -1.75
C9orf3-205ENST00000427193 OR4F5Q8NH21 305 aa4.1□□□□□ -1.75
C9orf3-205ENST00000427193 OR4X1Q8NH49 305 aa4.1□□□□□ -1.75
C9orf3-205ENST00000427193 STOML3Q8TAV4 291 aa4.1□□□□□ -1.75
C9orf3-205ENST00000427193 ZNF502Q8TBZ5 544 aa4.1□□□□□ -1.75
C9orf3-205ENST00000427193 DCUN1D4Q92564 292 aa4.1□□□□□ -1.75
C9orf3-205ENST00000427193 MFFQ9GZY8 342 aa4.1□□□□□ -1.75
C9orf3-205ENST00000427193 SLC25A31Q9H0C2 315 aa4.1□□□□□ -1.75
C9orf3-205ENST00000427193 SLA2Q9H6Q3 261 aa4.1□□□□□ -1.75
C9orf3-205ENST00000427193 LINC00527Q9UJ94 153 aa4.1□□□□□ -1.75
C9orf3-205ENST00000427193 WDR83OSQ9Y284 106 aa4.1□□□□□ -1.75
C9orf3-205ENST00000427193 CHTOPQ9Y3Y2 248 aaKnown RBP4.1□□□□□ -1.75
C9orf3-205ENST00000427193 FXYD6-FXYD2A0A087WZ82 144 aa4.09□□□□□ -1.75
C9orf3-205ENST00000427193 CLPSL1A2RUU4 121 aa4.09□□□□□ -1.75
C9orf3-205ENST00000427193 PSMB11A5LHX3 300 aa4.09□□□□□ -1.75
C9orf3-205ENST00000427193 MFSD2BA6NFX1 497 aa4.09□□□□□ -1.75
C9orf3-205ENST00000427193 FAM223BA6NKX1 122 aa4.09□□□□□ -1.75
C9orf3-205ENST00000427193 I3L521 148 aa4.09□□□□□ -1.75
C9orf3-205ENST00000427193 CORTO00230 105 aa4.09□□□□□ -1.75
C9orf3-205ENST00000427193 TAAR5O14804 337 aa4.09□□□□□ -1.75
C9orf3-205ENST00000427193 MT-CO2P00403 227 aa4.09□□□□□ -1.75
C9orf3-205ENST00000427193 IFNA10P01566 189 aa4.09□□□□□ -1.75
C9orf3-205ENST00000427193 PRH1P02810 166 aa4.09□□□□□ -1.75
C9orf3-205ENST00000427193 REG1AP05451 166 aa4.09□□□□□ -1.75
C9orf3-205ENST00000427193 S100A6P06703 90 aa4.09□□□□□ -1.75
C9orf3-205ENST00000427193 CTSGP08311 255 aa4.09□□□□□ -1.75
C9orf3-205ENST00000427193 IGLC1P0CG04 106 aa4.09□□□□□ -1.75
C9orf3-205ENST00000427193 APELAP0DMC3 54 aa4.09□□□□□ -1.75
C9orf3-205ENST00000427193 ARL3P36405 182 aa4.09□□□□□ -1.75
C9orf3-205ENST00000427193 SNCAP37840 140 aa4.09□□□□□ -1.75
C9orf3-205ENST00000427193 EIF2B2P49770 351 aaKnown RBP4.09□□□□□ -1.75
C9orf3-205ENST00000427193 CAV2P51636 162 aa4.09□□□□□ -1.75
C9orf3-205ENST00000427193 NKX2-5P52952 324 aaPredicted RBP4.09□□□□□ -1.75
C9orf3-205ENST00000427193 SUB1P53999 127 aaKnown RBP eCLIP4.09□□□□□ -1.75
C9orf3-205ENST00000427193 RHOGP84095 191 aa4.09□□□□□ -1.75
C9orf3-205ENST00000427193 ATP6V1FQ16864 119 aa4.09□□□□□ -1.75
C9orf3-205ENST00000427193 ECSCRQ19T08 205 aa4.09□□□□□ -1.75
C9orf3-205ENST00000427193 ZNF343Q6P1L6 599 aa4.09□□□□□ -1.75
C9orf3-205ENST00000427193 TEX38Q6PEX7 206 aa4.09□□□□□ -1.75
C9orf3-205ENST00000427193 TMUB2Q71RG4 321 aa4.09□□□□□ -1.75
C9orf3-205ENST00000427193 SLC16A13Q7RTY0 426 aa4.09□□□□□ -1.75
C9orf3-205ENST00000427193 TMEM144Q7Z5S9 345 aa4.09□□□□□ -1.75
C9orf3-205ENST00000427193 FAM223AQ8IWN6 122 aa4.09□□□□□ -1.75
C9orf3-205ENST00000427193 KLHDC1Q8N7A1 406 aa4.09□□□□□ -1.75
C9orf3-205ENST00000427193 ZNF491Q8N8L2 437 aa4.09□□□□□ -1.75
C9orf3-205ENST00000427193 OR5T1Q8NG75 326 aa4.09□□□□□ -1.75
C9orf3-205ENST00000427193 OR10P1Q8NGE3 313 aa4.09□□□□□ -1.75
C9orf3-205ENST00000427193 OR5C1Q8NGR4 320 aa4.09□□□□□ -1.75
C9orf3-205ENST00000427193 PINX1Q96BK5 328 aaKnown RBP4.09□□□□□ -1.75
C9orf3-205ENST00000427193 USMG5Q96IX5 58 aa4.09□□□□□ -1.75
C9orf3-205ENST00000427193 UBE2E2Q96LR5 201 aa4.09□□□□□ -1.75
C9orf3-205ENST00000427193 HINT2Q9BX68 163 aa4.09□□□□□ -1.75
C9orf3-205ENST00000427193 GON7Q9BXV9 100 aa4.09□□□□□ -1.75
C9orf3-205ENST00000427193 TNFRSF19Q9NS68 423 aa4.09□□□□□ -1.75
C9orf3-205ENST00000427193 FBXL17Q9UF56 701 aa4.09□□□□□ -1.75
C9orf3-205ENST00000427193 IGLV7-46A0A075B6I9 117 aa4.08□□□□□ -1.76
C9orf3-205ENST00000427193 IGHV4-4A0A075B6R2 117 aa4.08□□□□□ -1.76
C9orf3-205ENST00000427193 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.08□□□□□ -1.76
C9orf3-205ENST00000427193 BCL2L11O43521 198 aa4.08□□□□□ -1.76
C9orf3-205ENST00000427193 CLN5O75503 358 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms