RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 TMEM75Q8N9X5 138 aa11.9□□□□□ -0.5
PTPN13-203ENST00000427191 OR11H6Q8NGC7 330 aa11.9□□□□□ -0.5
PTPN13-203ENST00000427191 GTF3C1Q12789 2109 aa11.9□□□□□ -0.5
PTPN13-203ENST00000427191 TRACP01848 142 aa11.9□□□□□ -0.5
PTPN13-203ENST00000427191 TRGV1A0A0A0MS02 117 aa11.9□□□□□ -0.5
PTPN13-203ENST00000427191 FAM27E3Q08E93 113 aa11.9□□□□□ -0.5
PTPN13-203ENST00000427191 LAIR2Q6ISS4 152 aa11.9□□□□□ -0.5
PTPN13-203ENST00000427191 LYZL1Q6UWQ5 148 aa11.9□□□□□ -0.5
PTPN13-203ENST00000427191 E9PLN8 166 aa11.9□□□□□ -0.5
PTPN13-203ENST00000427191 LSM4Q9Y4Z0 139 aaKnown RBP11.9□□□□□ -0.5
PTPN13-203ENST00000427191 TET1Q8NFU7 2136 aa11.9□□□□□ -0.51
PTPN13-203ENST00000427191 IGLV3-12A0A075B6K2 115 aa11.9□□□□□ -0.51
PTPN13-203ENST00000427191 PMS2P5A8MQ11 134 aa11.9□□□□□ -0.51
PTPN13-203ENST00000427191 ADAMTSL5Q6ZMM2 481 aa11.9□□□□□ -0.51
PTPN13-203ENST00000427191 CITED1Q99966 193 aa11.9□□□□□ -0.51
PTPN13-203ENST00000427191 COL11A2P13942 1736 aaPredicted RBP11.89□□□□□ -0.51
PTPN13-203ENST00000427191 IGKV1D-13A0A0B4J2D9 117 aa11.89□□□□□ -0.51
PTPN13-203ENST00000427191 A0A1W2PRX2 142 aa11.89□□□□□ -0.51
PTPN13-203ENST00000427191 IGKV1-13P0DP09 117 aa11.89□□□□□ -0.51
PTPN13-203ENST00000427191 IFITM1P13164 125 aa11.89□□□□□ -0.51
PTPN13-203ENST00000427191 RFPL3SP0C7P2 107 aa11.89□□□□□ -0.51
PTPN13-203ENST00000427191 IGHV2-26A0A0B4J1V2 119 aa11.89□□□□□ -0.51
PTPN13-203ENST00000427191 TIMM23O14925 209 aa11.89□□□□□ -0.51
PTPN13-203ENST00000427191 DSCR8Q96T75 97 aa11.89□□□□□ -0.51
PTPN13-203ENST00000427191 GREB1LQ9C091 1923 aaPredicted RBP11.89□□□□□ -0.51
PTPN13-203ENST00000427191 ZSWIM8A7E2V4 1837 aa11.89□□□□□ -0.51
PTPN13-203ENST00000427191 DEPPQ9NTK1 212 aa11.89□□□□□ -0.51
PTPN13-203ENST00000427191 RPUSD1Q9UJJ7 312 aaKnown RBP11.89□□□□□ -0.51
PTPN13-203ENST00000427191 RNF114Q9Y508 228 aa11.89□□□□□ -0.51
PTPN13-203ENST00000427191 ZGRF1Q86YA3 2104 aa11.88□□□□□ -0.51
PTPN13-203ENST00000427191 SRRM5B3KS81 715 aa11.88□□□□□ -0.51
PTPN13-203ENST00000427191 C9JAW5 83 aa11.88□□□□□ -0.51
PTPN13-203ENST00000427191 SH2D1AO60880 128 aa11.88□□□□□ -0.51
PTPN13-203ENST00000427191 PSG1P11464 419 aa11.88□□□□□ -0.51
PTPN13-203ENST00000427191 TMEM14EPQ6UXP3 125 aa11.88□□□□□ -0.51
PTPN13-203ENST00000427191 NDUFB8O95169 186 aa11.88□□□□□ -0.51
PTPN13-203ENST00000427191 PRDM6Q9NQX0 595 aa11.88□□□□□ -0.51
PTPN13-203ENST00000427191 J3QRE1 110 aa11.88□□□□□ -0.51
PTPN13-203ENST00000427191 GREM1O60565 184 aa11.88□□□□□ -0.51
PTPN13-203ENST00000427191 SIGLEC12Q96PQ1 595 aa11.88□□□□□ -0.51
PTPN13-203ENST00000427191 H3BQ85 93 aa11.88□□□□□ -0.51
PTPN13-203ENST00000427191 CD55P08174 381 aa11.88□□□□□ -0.51
PTPN13-203ENST00000427191 Q6ZS49 121 aa11.88□□□□□ -0.51
PTPN13-203ENST00000427191 RMI2Q96E14 147 aa11.88□□□□□ -0.51
PTPN13-203ENST00000427191 Q0VG73 95 aa11.87□□□□□ -0.51
PTPN13-203ENST00000427191 IGKV2-40A0A087WW87 121 aaPredicted RBP11.87□□□□□ -0.51
PTPN13-203ENST00000427191 SAP30O75446 220 aa11.87□□□□□ -0.51
PTPN13-203ENST00000427191 IGKV2D-40P01614 121 aaPredicted RBP11.87□□□□□ -0.51
PTPN13-203ENST00000427191 TMEM158Q8WZ71 300 aa11.87□□□□□ -0.51
PTPN13-203ENST00000427191 A0A087X0K7 114 aa11.87□□□□□ -0.51
PTPN13-203ENST00000427191 LIME1Q9H400 295 aa11.87□□□□□ -0.51
PTPN13-203ENST00000427191 PLXND1Q9Y4D7 1925 aa11.87□□□□□ -0.51
PTPN13-203ENST00000427191 TRAV13-2A0A0B4J235 113 aa11.87□□□□□ -0.51
PTPN13-203ENST00000427191 LINC01545Q5VT33 79 aa11.87□□□□□ -0.51
PTPN13-203ENST00000427191 A0A1W2PR77 199 aa11.86□□□□□ -0.51
PTPN13-203ENST00000427191 LHFPL1Q86WI0 220 aa11.86□□□□□ -0.51
PTPN13-203ENST00000427191 NKAPP1Q8N9T2 125 aa11.86□□□□□ -0.51
PTPN13-203ENST00000427191 TMEM126AQ9H061 195 aa11.86□□□□□ -0.51
PTPN13-203ENST00000427191 CFPP27918 469 aa11.86□□□□□ -0.51
PTPN13-203ENST00000427191 PCNX2A6NKB5 2137 aa11.86□□□□□ -0.51
PTPN13-203ENST00000427191 IGHV1-24A0A0C4DH33 117 aa11.86□□□□□ -0.51
PTPN13-203ENST00000427191 SHISA3A0PJX4 238 aa11.86□□□□□ -0.51
PTPN13-203ENST00000427191 LCN12Q6JVE5 192 aa11.86□□□□□ -0.51
PTPN13-203ENST00000427191 CXCL1P09341 107 aa11.86□□□□□ -0.51
PTPN13-203ENST00000427191 IGHV1-8P0DP01 117 aa11.86□□□□□ -0.51
PTPN13-203ENST00000427191 CCL3L1P16619 93 aa11.86□□□□□ -0.51
PTPN13-203ENST00000427191 SRSF3P84103 164 aaKnown RBP11.86□□□□□ -0.51
PTPN13-203ENST00000427191 MPV17L2Q567V2 206 aa11.86□□□□□ -0.51
PTPN13-203ENST00000427191 HELZP42694 1942 aaKnown RBP11.86□□□□□ -0.51
PTPN13-203ENST00000427191 IGHG4P01861 327 aa11.86□□□□□ -0.51
PTPN13-203ENST00000427191 CFHR1Q03591 330 aa11.86□□□□□ -0.51
PTPN13-203ENST00000427191 C1orf159Q96HA4 380 aa11.86□□□□□ -0.51
PTPN13-203ENST00000427191 IGHV3OR16-8A0A075B7F1 116 aa11.85□□□□□ -0.51
PTPN13-203ENST00000427191 DAZ1Q9NQZ3 744 aaKnown RBP11.85□□□□□ -0.51
PTPN13-203ENST00000427191 ZC2HC1BQ5TFG8 222 aa11.85□□□□□ -0.51
PTPN13-203ENST00000427191 C20orf144Q9BQM9 153 aa11.85□□□□□ -0.51
PTPN13-203ENST00000427191 A0A0U1RRA0 63 aa11.85□□□□□ -0.51
PTPN13-203ENST00000427191 CRIM1Q9NZV1 1036 aa11.85□□□□□ -0.51
PTPN13-203ENST00000427191 ZNF492Q9P255 531 aa11.85□□□□□ -0.51
PTPN13-203ENST00000427191 ZNF561-AS1K7EIQ3 104 aa11.85□□□□□ -0.51
PTPN13-203ENST00000427191 A6NNC1 897 aa11.85□□□□□ -0.51
PTPN13-203ENST00000427191 C5orf64Q2M2E5 130 aa11.85□□□□□ -0.51
PTPN13-203ENST00000427191 SHANK1Q9Y566 2161 aa11.85□□□□□ -0.51
PTPN13-203ENST00000427191 MMP23AO75900 390 aa11.85□□□□□ -0.51
PTPN13-203ENST00000427191 CELA3BP08861 270 aa11.85□□□□□ -0.51
PTPN13-203ENST00000427191 ZNF319Q9P2F9 582 aa11.85□□□□□ -0.51
PTPN13-203ENST00000427191 THSD7AQ9UPZ6 1657 aa11.85□□□□□ -0.51
PTPN13-203ENST00000427191 C3orf79P0CE67 100 aa11.84□□□□□ -0.51
PTPN13-203ENST00000427191 NMSQ5H8A3 153 aa11.84□□□□□ -0.51
PTPN13-203ENST00000427191 ROS1P08922 2347 aa11.84□□□□□ -0.51
PTPN13-203ENST00000427191 IGHV1-3A0A0C4DH29 117 aa11.84□□□□□ -0.51
PTPN13-203ENST00000427191 GATA3P23771 443 aa11.84□□□□□ -0.51
PTPN13-203ENST00000427191 TAL2Q16559 108 aa11.84□□□□□ -0.51
PTPN13-203ENST00000427191 ZNF362Q5T0B9 420 aaPredicted RBP11.84□□□□□ -0.51
PTPN13-203ENST00000427191 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.84□□□□□ -0.51
PTPN13-203ENST00000427191 EXOC3-AS1Q8N2X6 119 aa11.84□□□□□ -0.51
PTPN13-203ENST00000427191 I3L3M4 83 aa11.84□□□□□ -0.51
PTPN13-203ENST00000427191 TCTEX1D4Q5JR98 221 aa11.84□□□□□ -0.51
PTPN13-203ENST00000427191 WFDC1Q9HC57 220 aa11.84□□□□□ -0.51
PTPN13-203ENST00000427191 NPC2P61916 151 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms