RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 HSP90B2PQ58FF3 399 aa3.27□□□□□ -1.89
SFXN1-202ENST00000421887 XAF1Q6GPH4 301 aa3.27□□□□□ -1.89
SFXN1-202ENST00000421887 TOMM20LQ6UXN7 152 aa3.27□□□□□ -1.89
SFXN1-202ENST00000421887 ZNF600Q6ZNG1 722 aa3.27□□□□□ -1.89
SFXN1-202ENST00000421887 LSM10Q969L4 123 aaKnown RBP3.27□□□□□ -1.89
SFXN1-202ENST00000421887 TMEM56Q96MV1 263 aa3.27□□□□□ -1.89
SFXN1-202ENST00000421887 VGLL1Q99990 258 aa3.27□□□□□ -1.89
SFXN1-202ENST00000421887 TAS2R8Q9NYW2 309 aa3.27□□□□□ -1.89
SFXN1-202ENST00000421887 PRO0461Q9UI25 63 aa3.27□□□□□ -1.89
SFXN1-202ENST00000421887 RBMX2Q9Y388 322 aaKnown RBP3.27□□□□□ -1.89
SFXN1-202ENST00000421887 ORC6Q9Y5N6 252 aa3.27□□□□□ -1.89
SFXN1-202ENST00000421887 HLA-DRB4X5D2U9 266 aa3.27□□□□□ -1.89
SFXN1-202ENST00000421887 TRBV7-9A0A0J9YWB2 115 aa3.26□□□□□ -1.89
SFXN1-202ENST00000421887 A0A0J9YY99 117 aa3.26□□□□□ -1.89
SFXN1-202ENST00000421887 UPK2O00526 184 aa3.26□□□□□ -1.89
SFXN1-202ENST00000421887 ATP8B1O43520 1251 aa3.26□□□□□ -1.89
SFXN1-202ENST00000421887 ADAP1O75689 374 aa3.26□□□□□ -1.89
SFXN1-202ENST00000421887 C1QBP02746 253 aa3.26□□□□□ -1.89
SFXN1-202ENST00000421887 CDK1P06493 297 aa3.26□□□□□ -1.89
SFXN1-202ENST00000421887 NQO2P16083 231 aa3.26□□□□□ -1.89
SFXN1-202ENST00000421887 MYL12AP19105 171 aa3.26□□□□□ -1.89
SFXN1-202ENST00000421887 M6PRP20645 277 aa3.26□□□□□ -1.89
SFXN1-202ENST00000421887 TALDO1P37837 337 aa3.26□□□□□ -1.89
SFXN1-202ENST00000421887 TAS2R31P59538 309 aa3.26□□□□□ -1.89
SFXN1-202ENST00000421887 RPL30P62888 115 aaKnown RBP3.26□□□□□ -1.89
SFXN1-202ENST00000421887 WT1-ASQ06250 92 aa3.26□□□□□ -1.89
SFXN1-202ENST00000421887 UNC119Q13432 240 aa3.26□□□□□ -1.89
SFXN1-202ENST00000421887 FLOT2Q14254 428 aa3.26□□□□□ -1.89
SFXN1-202ENST00000421887 ACSM3Q53FZ2 586 aa3.26□□□□□ -1.89
SFXN1-202ENST00000421887 OR8G2PQ6IF36 304 aa3.26□□□□□ -1.89
SFXN1-202ENST00000421887 TPRA1Q86W33 373 aa3.26□□□□□ -1.89
SFXN1-202ENST00000421887 CMTM1Q8IZ96 169 aa3.26□□□□□ -1.89
SFXN1-202ENST00000421887 H1FOOQ8IZA3 346 aaPredicted RBP3.26□□□□□ -1.89
SFXN1-202ENST00000421887 OR1B1Q8NGR6 318 aa3.26□□□□□ -1.89
SFXN1-202ENST00000421887 OR1L8Q8NGR8 309 aa3.26□□□□□ -1.89
SFXN1-202ENST00000421887 OR13F1Q8NGS4 319 aa3.26□□□□□ -1.89
SFXN1-202ENST00000421887 OR10J6PQ8NGY7 276 aa3.26□□□□□ -1.89
SFXN1-202ENST00000421887 RXFP4Q8TDU9 374 aa3.26□□□□□ -1.89
SFXN1-202ENST00000421887 TMEM230Q96A57 120 aa3.26□□□□□ -1.89
SFXN1-202ENST00000421887 RAB3CQ96E17 227 aa3.26□□□□□ -1.89
SFXN1-202ENST00000421887 ARHGAP5-AS1Q96IT6 56 aa3.26□□□□□ -1.89
SFXN1-202ENST00000421887 PECRQ9BY49 303 aa3.26□□□□□ -1.89
SFXN1-202ENST00000421887 GABARAPL3Q9BY60 117 aa3.26□□□□□ -1.89
SFXN1-202ENST00000421887 AMBNQ9NP70 447 aa3.26□□□□□ -1.89
SFXN1-202ENST00000421887 PLCXD1Q9NUJ7 323 aa3.26□□□□□ -1.89
SFXN1-202ENST00000421887 BABAM2Q9NXR7 383 aa3.26□□□□□ -1.89
SFXN1-202ENST00000421887 HMCN2Q8NDA2 5059 aa3.25□□□□□ -1.89
SFXN1-202ENST00000421887 TEX50A0A1B0GTY4 177 aa3.25□□□□□ -1.89
SFXN1-202ENST00000421887 SERTM2A0A1B0GWG4 89 aa3.25□□□□□ -1.89
SFXN1-202ENST00000421887 WRBO00258 174 aa3.25□□□□□ -1.89
SFXN1-202ENST00000421887 SNAPC5O75971 98 aa3.25□□□□□ -1.89
SFXN1-202ENST00000421887 MT-CO2P00403 227 aa3.25□□□□□ -1.89
SFXN1-202ENST00000421887 HPRT1P00492 218 aa3.25□□□□□ -1.89
SFXN1-202ENST00000421887 IGHV3-48P01763 117 aa3.25□□□□□ -1.89
SFXN1-202ENST00000421887 CD37P11049 281 aa3.25□□□□□ -1.89
SFXN1-202ENST00000421887 B2MP61769 119 aa3.25□□□□□ -1.89
SFXN1-202ENST00000421887 SRPXP78539 464 aa3.25□□□□□ -1.89
SFXN1-202ENST00000421887 PSG9Q00887 426 aa3.25□□□□□ -1.89
SFXN1-202ENST00000421887 CATR1Q13166 79 aa3.25□□□□□ -1.89
SFXN1-202ENST00000421887 EBLN2Q6P2I7 272 aa3.25□□□□□ -1.89
SFXN1-202ENST00000421887 Q6ZRP5 223 aa3.25□□□□□ -1.89
SFXN1-202ENST00000421887 DHRSXQ8N5I4 330 aa3.25□□□□□ -1.89
SFXN1-202ENST00000421887 OR52I1Q8NGK6 324 aa3.25□□□□□ -1.89
SFXN1-202ENST00000421887 OR1L4Q8NGR5 311 aa3.25□□□□□ -1.89
SFXN1-202ENST00000421887 OR1P1Q8NH06 330 aa3.25□□□□□ -1.89
SFXN1-202ENST00000421887 COQ8AQ8NI60 647 aa3.25□□□□□ -1.89
SFXN1-202ENST00000421887 MAFIPQ8WZ33 124 aa3.25□□□□□ -1.89
SFXN1-202ENST00000421887 RBPMSQ93062 196 aaKnown RBP3.25□□□□□ -1.89
SFXN1-202ENST00000421887 C11orf52Q96A22 123 aa3.25□□□□□ -1.89
SFXN1-202ENST00000421887 PGLYRP3Q96LB9 341 aa3.25□□□□□ -1.89
SFXN1-202ENST00000421887 LINC00052Q96N35 136 aa3.25□□□□□ -1.89
SFXN1-202ENST00000421887 DERL3Q96Q80 235 aa3.25□□□□□ -1.89
SFXN1-202ENST00000421887 FAM107BQ9H098 131 aa3.25□□□□□ -1.89
SFXN1-202ENST00000421887 LPAR5Q9H1C0 372 aa3.25□□□□□ -1.89
SFXN1-202ENST00000421887 SLC35B3Q9H1N7 401 aa3.25□□□□□ -1.89
SFXN1-202ENST00000421887 PLGRKTQ9HBL7 147 aa3.25□□□□□ -1.89
SFXN1-202ENST00000421887 TP53TG3Q9ULZ0 132 aa3.25□□□□□ -1.89
SFXN1-202ENST00000421887 IGHV3-38A0A0C4DH36 116 aa3.24□□□□□ -1.89
SFXN1-202ENST00000421887 A0A0U1RQV1 116 aa3.24□□□□□ -1.89
SFXN1-202ENST00000421887 PNMA8CA0A1B0GUJ8 204 aa3.24□□□□□ -1.89
SFXN1-202ENST00000421887 A8MU10 97 aa3.24□□□□□ -1.89
SFXN1-202ENST00000421887 ZNF705GA8MUZ8 300 aaPredicted RBP3.24□□□□□ -1.89
SFXN1-202ENST00000421887 TMEM14DPA8MWL7 114 aa3.24□□□□□ -1.89
SFXN1-202ENST00000421887 H3BNG1 76 aa3.24□□□□□ -1.89
SFXN1-202ENST00000421887 I3L2K1 104 aa3.24□□□□□ -1.89
SFXN1-202ENST00000421887 L7N2F9 121 aa3.24□□□□□ -1.89
SFXN1-202ENST00000421887 RBFOX2O43251 390 aaKnown RBP eCLIP3.24□□□□□ -1.89
SFXN1-202ENST00000421887 HLA-DQB1P01920 261 aa3.24□□□□□ -1.89
SFXN1-202ENST00000421887 CTXN2P0C2S0 81 aa3.24□□□□□ -1.89
SFXN1-202ENST00000421887 LIMS3P0CW19 117 aa3.24□□□□□ -1.89
SFXN1-202ENST00000421887 LIMS4P0CW20 117 aa3.24□□□□□ -1.89
SFXN1-202ENST00000421887 HTN1P15515 57 aa3.24□□□□□ -1.89
SFXN1-202ENST00000421887 NFYAP23511 347 aaPredicted RBP3.24□□□□□ -1.89
SFXN1-202ENST00000421887 GADD45AP24522 165 aa3.24□□□□□ -1.89
SFXN1-202ENST00000421887 CRYBB3P26998 211 aa3.24□□□□□ -1.89
SFXN1-202ENST00000421887 RPL13AP40429 203 aaKnown RBP3.24□□□□□ -1.89
SFXN1-202ENST00000421887 RANBP1P43487 201 aa3.24□□□□□ -1.89
SFXN1-202ENST00000421887 RORCP51449 518 aa3.24□□□□□ -1.89
SFXN1-202ENST00000421887 ARPC4P59998 168 aa3.24□□□□□ -1.89
SFXN1-202ENST00000421887 RPS11P62280 158 aaKnown RBP eCLIP3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms