RNA–Protein interactions for RNA: ENST00000421340.5

ABCF3-202, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 690 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-202ENST00000421340 RPL7P18124 248 aaKnown RBP16.4■□□□□ 0.22
ABCF3-202ENST00000421340 C16orf54Q6UWD8 224 aa16.4■□□□□ 0.22
ABCF3-202ENST00000421340 SHISA2Q6UWI4 295 aa16.4■□□□□ 0.22
ABCF3-202ENST00000421340 C12orf54Q6X4T0 127 aa16.4■□□□□ 0.22
ABCF3-202ENST00000421340 OR9G4Q8NGQ1 327 aa16.4■□□□□ 0.22
ABCF3-202ENST00000421340 SUN5Q8TC36 379 aa16.4■□□□□ 0.22
ABCF3-202ENST00000421340 OR51M1Q9H341 326 aa16.4■□□□□ 0.22
ABCF3-202ENST00000421340 SETD2Q9BYW2 2564 aaPredicted RBP16.4■□□□□ 0.22
ABCF3-202ENST00000421340 HMGB3O15347 200 aaKnown RBP16.39■□□□□ 0.21
ABCF3-202ENST00000421340 ARL14EPLP0DKL9 152 aa16.39■□□□□ 0.21
ABCF3-202ENST00000421340 PSMB3P49720 205 aa16.39■□□□□ 0.21
ABCF3-202ENST00000421340 IL34Q6ZMJ4 242 aa16.39■□□□□ 0.21
ABCF3-202ENST00000421340 C3orf56Q8N813 242 aa16.39■□□□□ 0.21
ABCF3-202ENST00000421340 PCNPQ8WW12 178 aaKnown RBP16.39■□□□□ 0.21
ABCF3-202ENST00000421340 ZNF503Q96F45 646 aa16.39■□□□□ 0.21
ABCF3-202ENST00000421340 PAXXQ9BUH6 204 aa16.39■□□□□ 0.21
ABCF3-202ENST00000421340 HRH4Q9H3N8 390 aa16.39■□□□□ 0.21
ABCF3-202ENST00000421340 C2orf70A6NJV1 201 aa16.38■□□□□ 0.21
ABCF3-202ENST00000421340 CHEK1O14757 476 aa16.38■□□□□ 0.21
ABCF3-202ENST00000421340 MRPS12O15235 138 aaKnown RBP16.38■□□□□ 0.21
ABCF3-202ENST00000421340 OR7C2O60412 319 aa16.38■□□□□ 0.21
ABCF3-202ENST00000421340 APOHP02749 345 aaPredicted RBP16.38■□□□□ 0.21
ABCF3-202ENST00000421340 GCHFRP30047 84 aa16.38■□□□□ 0.21
ABCF3-202ENST00000421340 PPT1P50897 306 aa16.38■□□□□ 0.21
ABCF3-202ENST00000421340 LEMD1Q68G75 181 aa16.38■□□□□ 0.21
ABCF3-202ENST00000421340 OR8I2Q8N0Y5 310 aa16.38■□□□□ 0.21
ABCF3-202ENST00000421340 ELOVL1Q9BW60 279 aa16.38■□□□□ 0.21
ABCF3-202ENST00000421340 RHPN1-AS1Q9BWJ2 59 aa16.38■□□□□ 0.21
ABCF3-202ENST00000421340 TMEM167BQ9NRX6 74 aa16.38■□□□□ 0.21
ABCF3-202ENST00000421340 MED9Q9NWA0 146 aa16.38■□□□□ 0.21
ABCF3-202ENST00000421340 EIF3GO75821 320 aaKnown RBP eCLIP16.37■□□□□ 0.21
ABCF3-202ENST00000421340 CD5P06127 495 aa16.37■□□□□ 0.21
ABCF3-202ENST00000421340 GP9P14770 177 aa16.37■□□□□ 0.21
ABCF3-202ENST00000421340 CBLN1P23435 193 aa16.37■□□□□ 0.21
ABCF3-202ENST00000421340 FGF8P55075 233 aaPredicted RBP16.37■□□□□ 0.21
ABCF3-202ENST00000421340 GLMPQ8WWB7 406 aa16.37■□□□□ 0.21
ABCF3-202ENST00000421340 SIGLEC8Q9NYZ4 499 aa16.37■□□□□ 0.21
ABCF3-202ENST00000421340 ATRQ13535 2644 aa16.36■□□□□ 0.21
ABCF3-202ENST00000421340 OVOL1O14753 267 aa16.36■□□□□ 0.21
ABCF3-202ENST00000421340 HIST1H1EP10412 219 aaKnown RBP16.36■□□□□ 0.21
ABCF3-202ENST00000421340 CCL20P78556 96 aa16.36■□□□□ 0.21
ABCF3-202ENST00000421340 M0QZ24 198 aa16.35■□□□□ 0.21
ABCF3-202ENST00000421340 CSN3P07498 182 aa16.35■□□□□ 0.21
ABCF3-202ENST00000421340 FOLR2P14207 255 aa16.35■□□□□ 0.21
ABCF3-202ENST00000421340 GALR1P47211 349 aa16.35■□□□□ 0.21
ABCF3-202ENST00000421340 MEOX2P50222 304 aa16.35■□□□□ 0.21
ABCF3-202ENST00000421340 GUK1Q16774 197 aa16.35■□□□□ 0.21
ABCF3-202ENST00000421340 FXYD5Q96DB9 178 aa16.35■□□□□ 0.21
ABCF3-202ENST00000421340 ARL2-SNX15V9GYD0 113 aa16.35■□□□□ 0.21
ABCF3-202ENST00000421340 IGHV3-49A0A0A0MS15 119 aa16.34■□□□□ 0.21
ABCF3-202ENST00000421340 LINC00862A6NCI5 91 aa16.34■□□□□ 0.21
ABCF3-202ENST00000421340 HELTA6NFD8 242 aa16.34■□□□□ 0.21
ABCF3-202ENST00000421340 PF4P02776 101 aa16.34■□□□□ 0.21
ABCF3-202ENST00000421340 NBEAP1P0C6P0 100 aa16.34■□□□□ 0.21
ABCF3-202ENST00000421340 IGLC2P0DOY2 106 aa16.34■□□□□ 0.21
ABCF3-202ENST00000421340 TAGLN2P37802 199 aaKnown RBP16.34■□□□□ 0.21
ABCF3-202ENST00000421340 TMPRSS5Q9H3S3 457 aa16.34■□□□□ 0.21
ABCF3-202ENST00000421340 IGHV3OR16-13A0A075B7E8 117 aa16.33■□□□□ 0.2
ABCF3-202ENST00000421340 A0A087X0K7 114 aa16.33■□□□□ 0.2
ABCF3-202ENST00000421340 IGHV3-74A0A0B4J1X5 117 aa16.33■□□□□ 0.2
ABCF3-202ENST00000421340 A0A1B0GV50 99 aa16.33■□□□□ 0.2
ABCF3-202ENST00000421340 PYYP10082 97 aa16.33■□□□□ 0.2
ABCF3-202ENST00000421340 UBE2L3P68036 154 aaKnown RBP16.33■□□□□ 0.2
ABCF3-202ENST00000421340 SIGLEC15Q6ZMC9 328 aa16.33■□□□□ 0.2
ABCF3-202ENST00000421340 LINC00482Q8N8I6 264 aa16.33■□□□□ 0.2
ABCF3-202ENST00000421340 MANBALQ9NQG1 85 aa16.33■□□□□ 0.2
ABCF3-202ENST00000421340 SMAD5-AS1Q9Y6J3 95 aa16.33■□□□□ 0.2
ABCF3-202ENST00000421340 IGHV3-66A0A0C4DH42 116 aa16.32■□□□□ 0.2
ABCF3-202ENST00000421340 IFNA1P01562 189 aa16.32■□□□□ 0.2
ABCF3-202ENST00000421340 OR10J4P0C629 311 aa16.32■□□□□ 0.2
ABCF3-202ENST00000421340 PDE6HQ13956 83 aa16.32■□□□□ 0.2
ABCF3-202ENST00000421340 ADAMTSL5Q6ZMM2 481 aa16.32■□□□□ 0.2
ABCF3-202ENST00000421340 H3BQ15 152 aa16.31■□□□□ 0.2
ABCF3-202ENST00000421340 ZNF253O75346 499 aa16.31■□□□□ 0.2
ABCF3-202ENST00000421340 ATF4P18848 351 aaPredicted RBP16.31■□□□□ 0.2
ABCF3-202ENST00000421340 RIPPLY3P57055 190 aa16.31■□□□□ 0.2
ABCF3-202ENST00000421340 FAM90A2PQ658T7 463 aa16.31■□□□□ 0.2
ABCF3-202ENST00000421340 IQCF2Q8IXL9 164 aa16.31■□□□□ 0.2
ABCF3-202ENST00000421340 FAM210AQ96ND0 272 aa16.31■□□□□ 0.2
ABCF3-202ENST00000421340 ZNF586Q9NXT0 402 aa16.31■□□□□ 0.2
ABCF3-202ENST00000421340 FBN1P35555 2871 aaKnown RBP16.31■□□□□ 0.2
ABCF3-202ENST00000421340 TRBV19A0A075B6N1 114 aa16.3■□□□□ 0.2
ABCF3-202ENST00000421340 A0A1W2PRE2 83 aa16.3■□□□□ 0.2
ABCF3-202ENST00000421340 RAB19A4D1S5 217 aa16.3■□□□□ 0.2
ABCF3-202ENST00000421340 ZNF785A8K8V0 405 aa16.3■□□□□ 0.2
ABCF3-202ENST00000421340 EDN2P20800 178 aa16.3■□□□□ 0.2
ABCF3-202ENST00000421340 NDUFA5Q16718 116 aa16.3■□□□□ 0.2
ABCF3-202ENST00000421340 LYPD1Q8N2G4 141 aa16.3■□□□□ 0.2
ABCF3-202ENST00000421340 TXNDC17Q9BRA2 123 aa16.3■□□□□ 0.2
ABCF3-202ENST00000421340 NKX6-2Q9C056 277 aaPredicted RBP16.3■□□□□ 0.2
ABCF3-202ENST00000421340 GNG13Q9P2W3 67 aa16.3■□□□□ 0.2
ABCF3-202ENST00000421340 TCF24Q7RTU0 167 aa16.29■□□□□ 0.2
ABCF3-202ENST00000421340 C17orf77Q96MU5 243 aa16.29■□□□□ 0.2
ABCF3-202ENST00000421340 MLXQ9UH92 298 aa16.29■□□□□ 0.2
ABCF3-202ENST00000421340 RBFOX3A6NFN3 312 aa16.28■□□□□ 0.2
ABCF3-202ENST00000421340 NDUFS6O75380 124 aaKnown RBP16.28■□□□□ 0.2
ABCF3-202ENST00000421340 BCL2P10415 239 aa16.28■□□□□ 0.2
ABCF3-202ENST00000421340 SAMD13Q5VXD3 122 aa16.28■□□□□ 0.2
ABCF3-202ENST00000421340 WFDC9Q8NEX5 89 aa16.28■□□□□ 0.2
ABCF3-202ENST00000421340 SMDT1Q9H4I9 107 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 161 ms